RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 SPOCK3Q9BQ16 436 aa7.35□□□□□ -1.23
CDKL5-209ENST00000635828 ANKRD60Q9BZ19 345 aa7.35□□□□□ -1.23
CDKL5-209ENST00000635828 H2AFY2Q9P0M6 372 aaPredicted RBP7.35□□□□□ -1.23
CDKL5-209ENST00000635828 CRNNQ9UBG3 495 aaPredicted RBP7.35□□□□□ -1.23
CDKL5-209ENST00000635828 FAM221AA4D161 298 aa7.35□□□□□ -1.23
CDKL5-209ENST00000635828 OR6C6A6NF89 314 aa7.35□□□□□ -1.23
CDKL5-209ENST00000635828 CASKO14936 926 aa7.35□□□□□ -1.23
CDKL5-209ENST00000635828 RPP14O95059 124 aaKnown RBP7.35□□□□□ -1.23
CDKL5-209ENST00000635828 MPV17P39210 176 aa7.35□□□□□ -1.23
CDKL5-209ENST00000635828 MAGEB1P43366 347 aa7.35□□□□□ -1.23
CDKL5-209ENST00000635828 CDH15P55291 814 aa7.35□□□□□ -1.23
CDKL5-209ENST00000635828 OR12D2P58182 307 aa7.35□□□□□ -1.23
CDKL5-209ENST00000635828 LSM6P62312 80 aaKnown RBP7.35□□□□□ -1.23
CDKL5-209ENST00000635828 OCLNQ16625 522 aa7.35□□□□□ -1.23
CDKL5-209ENST00000635828 TTC23Q5W5X9 447 aa7.35□□□□□ -1.23
CDKL5-209ENST00000635828 SLC35F2Q8IXU6 374 aa7.35□□□□□ -1.23
CDKL5-209ENST00000635828 RDH12Q96NR8 316 aa7.35□□□□□ -1.23
CDKL5-209ENST00000635828 CNN2Q99439 309 aaKnown RBP7.35□□□□□ -1.23
CDKL5-209ENST00000635828 UBTD1Q9HAC8 227 aa7.35□□□□□ -1.23
CDKL5-209ENST00000635828 ACOXLQ9NUZ1 547 aa7.35□□□□□ -1.23
CDKL5-209ENST00000635828 MRM2Q9UI43 246 aaKnown RBP7.35□□□□□ -1.23
CDKL5-209ENST00000635828 LRP12Q9Y561 859 aa7.35□□□□□ -1.23
CDKL5-209ENST00000635828 H0YAE9 185 aa7.34□□□□□ -1.23
CDKL5-209ENST00000635828 LALBAP00709 142 aa7.34□□□□□ -1.23
CDKL5-209ENST00000635828 LYNP07948 512 aa7.34□□□□□ -1.23
CDKL5-209ENST00000635828 GFOD2Q3B7J2 385 aa7.34□□□□□ -1.23
CDKL5-209ENST00000635828 SPRNQ5BIV9 151 aa7.34□□□□□ -1.23
CDKL5-209ENST00000635828 ELFN2Q5R3F8 820 aa7.34□□□□□ -1.23
CDKL5-209ENST00000635828 RDH10Q8IZV5 341 aa7.34□□□□□ -1.23
CDKL5-209ENST00000635828 OR1F12Q8NHA8 337 aa7.34□□□□□ -1.23
CDKL5-209ENST00000635828 FNDC8Q8TC99 324 aa7.34□□□□□ -1.23
CDKL5-209ENST00000635828 OR2J1Q9GZK6 312 aa7.34□□□□□ -1.23
CDKL5-209ENST00000635828 PLEKHF2Q9H8W4 249 aa7.34□□□□□ -1.23
CDKL5-209ENST00000635828 LAMP5Q9UJQ1 280 aa7.34□□□□□ -1.23
CDKL5-209ENST00000635828 POU2F3Q9UKI9 436 aa7.34□□□□□ -1.23
CDKL5-209ENST00000635828 AMDHD2Q9Y303 409 aa7.34□□□□□ -1.23
CDKL5-209ENST00000635828 STARD10Q9Y365 291 aa7.34□□□□□ -1.23
CDKL5-209ENST00000635828 MYO9AB2RTY4 2548 aa7.34□□□□□ -1.23
CDKL5-209ENST00000635828 PNMA8CA0A1B0GUJ8 204 aa7.34□□□□□ -1.23
CDKL5-209ENST00000635828 HTR1AP08908 422 aa7.34□□□□□ -1.23
CDKL5-209ENST00000635828 THBS4P35443 961 aa7.34□□□□□ -1.23
CDKL5-209ENST00000635828 ATP6V1E1P36543 226 aa7.34□□□□□ -1.23
CDKL5-209ENST00000635828 SLC15A1P46059 708 aa7.34□□□□□ -1.23
CDKL5-209ENST00000635828 FABP6P51161 128 aa7.34□□□□□ -1.23
CDKL5-209ENST00000635828 GGTLC2Q14390 218 aa7.34□□□□□ -1.23
CDKL5-209ENST00000635828 ZNF704Q6ZNC4 412 aaPredicted RBP7.34□□□□□ -1.23
CDKL5-209ENST00000635828 SLC16A9Q7RTY1 509 aa7.34□□□□□ -1.23
CDKL5-209ENST00000635828 THAP5Q7Z6K1 395 aa7.34□□□□□ -1.23
CDKL5-209ENST00000635828 BHLHE23Q8NDY6 225 aa7.34□□□□□ -1.23
CDKL5-209ENST00000635828 ATF6BQ99941 703 aa7.34□□□□□ -1.23
CDKL5-209ENST00000635828 SYT3Q9BQG1 590 aa7.34□□□□□ -1.23
CDKL5-209ENST00000635828 VCXQ9H320 206 aa7.34□□□□□ -1.23
CDKL5-209ENST00000635828 ENOPH1Q9UHY7 261 aa7.34□□□□□ -1.23
CDKL5-209ENST00000635828 CHD3Q12873 2000 aaKnown RBP7.34□□□□□ -1.23
CDKL5-209ENST00000635828 SLC22A31A6NKX4 558 aa7.34□□□□□ -1.23
CDKL5-209ENST00000635828 SELEP16581 610 aa7.34□□□□□ -1.23
CDKL5-209ENST00000635828 MYF6P23409 242 aa7.34□□□□□ -1.23
CDKL5-209ENST00000635828 ARR3P36575 388 aa7.34□□□□□ -1.23
CDKL5-209ENST00000635828 SLC6A9P48067 706 aa7.34□□□□□ -1.23
CDKL5-209ENST00000635828 SNTB2Q13425 540 aaKnown RBP7.34□□□□□ -1.23
CDKL5-209ENST00000635828 TMEM108Q6UXF1 575 aa7.34□□□□□ -1.23
CDKL5-209ENST00000635828 ZFP41Q8N8Y5 198 aa7.34□□□□□ -1.23
CDKL5-209ENST00000635828 GJC3Q8NFK1 279 aa7.34□□□□□ -1.23
CDKL5-209ENST00000635828 OR2AJ1Q8NGZ0 328 aa7.34□□□□□ -1.23
CDKL5-209ENST00000635828 ABHD4Q8TB40 342 aa7.34□□□□□ -1.23
CDKL5-209ENST00000635828 TRUB1Q8WWH5 349 aaKnown RBP7.34□□□□□ -1.23
CDKL5-209ENST00000635828 DVL3Q92997 716 aaPredicted RBP7.34□□□□□ -1.23
CDKL5-209ENST00000635828 COPS4Q9BT78 406 aa7.34□□□□□ -1.23
CDKL5-209ENST00000635828 TEX12Q9BXU0 123 aa7.34□□□□□ -1.23
CDKL5-209ENST00000635828 C1orf198Q9H425 327 aa7.34□□□□□ -1.23
CDKL5-209ENST00000635828 CA10Q9NS85 328 aa7.34□□□□□ -1.23
CDKL5-209ENST00000635828 CLN6Q9NWW5 311 aa7.34□□□□□ -1.23
CDKL5-209ENST00000635828 ITPR3Q14573 2671 aa7.34□□□□□ -1.24
CDKL5-209ENST00000635828 SLC1A7O00341 560 aa7.33□□□□□ -1.24
CDKL5-209ENST00000635828 LMX1BO60663 402 aa7.33□□□□□ -1.24
CDKL5-209ENST00000635828 SMPD2O60906 423 aa7.33□□□□□ -1.24
CDKL5-209ENST00000635828 OPRL1P41146 370 aa7.33□□□□□ -1.24
CDKL5-209ENST00000635828 NRN1LQ496H8 165 aa7.33□□□□□ -1.24
CDKL5-209ENST00000635828 C6orf141Q5SZD1 244 aa7.33□□□□□ -1.24
CDKL5-209ENST00000635828 P2RY8Q86VZ1 359 aa7.33□□□□□ -1.24
CDKL5-209ENST00000635828 CISD1Q9NZ45 108 aaKnown RBP7.33□□□□□ -1.24
CDKL5-209ENST00000635828 ERVK-18Q9QC07 812 aa7.33□□□□□ -1.24
CDKL5-209ENST00000635828 LAMP3Q9UQV4 416 aa7.33□□□□□ -1.24
CDKL5-209ENST00000635828 SLC22A13Q9Y226 551 aa7.33□□□□□ -1.24
CDKL5-209ENST00000635828 ATP23Q9Y6H3 246 aa7.33□□□□□ -1.24
CDKL5-209ENST00000635828 MAST4O15021 2626 aa7.33□□□□□ -1.24
CDKL5-209ENST00000635828 ACSM4P0C7M7 580 aa7.33□□□□□ -1.24
CDKL5-209ENST00000635828 LIMS3P0CW19 117 aa7.33□□□□□ -1.24
CDKL5-209ENST00000635828 LIMS4P0CW20 117 aa7.33□□□□□ -1.24
CDKL5-209ENST00000635828 NANOS3P60323 173 aaKnown RBP7.33□□□□□ -1.24
CDKL5-209ENST00000635828 ST3GAL4Q11206 333 aa7.33□□□□□ -1.24
CDKL5-209ENST00000635828 SLC35D3Q5M8T2 416 aa7.33□□□□□ -1.24
CDKL5-209ENST00000635828 SLC25A30Q5SVS4 291 aa7.33□□□□□ -1.24
CDKL5-209ENST00000635828 ZNF322Q6U7Q0 402 aaPredicted RBP7.33□□□□□ -1.24
CDKL5-209ENST00000635828 PRSS45Q7RTY3 260 aa7.33□□□□□ -1.24
CDKL5-209ENST00000635828 TGIF2LYQ8IUE0 185 aa7.33□□□□□ -1.24
CDKL5-209ENST00000635828 DEPDC4Q8N2C3 294 aa7.33□□□□□ -1.24
CDKL5-209ENST00000635828 ZNF786Q8N393 782 aa7.33□□□□□ -1.24
CDKL5-209ENST00000635828 FAM222BQ8WU58 562 aa7.33□□□□□ -1.24
CDKL5-209ENST00000635828 RNF133Q8WVZ7 376 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms