RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 RNF212BA8MTL3 300 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 G3V4G9 280 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 TMX2-CTNND1H3BSU7 103 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 ZNF195O14628 629 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 ARPC2O15144 300 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 DLEU1O43261 78 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 SLC16A7O60669 478 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 ALOX12BO75342 701 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 KHDRBS3O75525 346 aaKnown RBP2.5□□□□□ -2.01
PSPC1-208ENST00000635562 TRAPPC6AO75865 159 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 SULT1C4O75897 302 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 DCTN3O75935 186 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 ATP5LO75964 103 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 KRT33AO76009 404 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 CNIH1O95406 144 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 OXTP01178 125 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 IFNA10P01566 189 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 MT-ND4P03905 459 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 CD74P04233 296 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 SP1P08047 785 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 FAM106CPP0CH98 169 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 LIMS3P0CW19 117 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 LIMS4P0CW20 117 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 MGMTP16455 207 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 AKR1C4P17516 323 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 C4BPBP20851 252 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 FASP25445 335 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 GCAP28676 217 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 FGF9P31371 208 aaPredicted RBP2.5□□□□□ -2.01
PSPC1-208ENST00000635562 FOXN2P32314 431 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 SFTPDP35247 375 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 DCTP40126 519 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 BDKRB1P46663 353 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 YAP1P46937 504 aaKnown RBP2.5□□□□□ -2.01
PSPC1-208ENST00000635562 PGFP49763 221 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 CD81P60033 236 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 RPS4XP62701 263 aaKnown RBP2.5□□□□□ -2.01
PSPC1-208ENST00000635562 PRKCDQ05655 676 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 ZNF415Q09FC8 603 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 SKP2Q13309 424 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 KIR2DS1Q14954 304 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 ABRAXAS2Q15018 415 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 CCDC6Q16204 474 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 TBC1D28Q2M2D7 210 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 TRMT5Q32P41 509 aaKnown RBP2.5□□□□□ -2.01
PSPC1-208ENST00000635562 ZNF585BQ52M93 769 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 DMRTC1Q5HYR2 192 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 ELFN2Q5R3F8 820 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 PPM1LQ5SGD2 360 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 C9orf57Q5W0N0 161 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 FBXW9Q5XUX1 488 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 OR8G2PQ6IF36 304 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 SLC27A4Q6P1M0 643 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 CASP12Q6UXS9 341 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 OLIG3Q7RTU3 272 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 C16orf82Q7Z2V1 217 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 C17orf64Q86WR6 236 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 RALGPS2Q86X27 583 aaPredicted RBP2.5□□□□□ -2.01
PSPC1-208ENST00000635562 NIT1Q86X76 327 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 ANGPTL5Q86XS5 388 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 SLC30A8Q8IWU4 369 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 ODF3L1Q8IXM7 274 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 SLC35F2Q8IXU6 374 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 LGI2Q8N0V4 545 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 DHRSXQ8N5I4 330 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 TPRX1Q8N7U7 411 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 ZNF441Q8N8Z8 693 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 ZSCAN4Q8NAM6 433 aaPredicted RBP2.5□□□□□ -2.01
PSPC1-208ENST00000635562 OR4F15Q8NGB8 312 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 OR5L2Q8NGL0 311 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 OR4K15Q8NH41 348 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 OR10A6Q8NH74 314 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 STOML3Q8TAV4 291 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 ITFG1Q8TB96 612 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 RDH11Q8TC12 318 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 SFXN5Q8TD22 340 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 CCDC107Q8WV48 283 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 TFB1MQ8WVM0 346 aaKnown RBP2.5□□□□□ -2.01
PSPC1-208ENST00000635562 RAB8BQ92930 207 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 TCEAL3Q969E4 200 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 TESCQ96BS2 214 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 L3HYPDHQ96EM0 354 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 MED8Q96G25 268 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 SLC45A3Q96JT2 553 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 ADGRG7Q96K78 797 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 PHB2Q99623 299 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 EPYCQ99645 322 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 GPR22Q99680 433 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 APOL4Q9BPW4 351 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 DCTN5Q9BTE1 182 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 CDCA4Q9BXL8 241 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 CCDC90BQ9GZT6 254 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 COMMD4Q9H0A8 199 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 TXNIPQ9H3M7 391 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 RNF41Q9H4P4 317 aaPredicted RBP2.5□□□□□ -2.01
PSPC1-208ENST00000635562 ALG9Q9H6U8 611 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 NMNAT1Q9HAN9 279 aaPredicted RBP2.5□□□□□ -2.01
PSPC1-208ENST00000635562 RDH14Q9HBH5 336 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 C6orf50Q9HD87 102 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 RETNQ9HD89 108 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms