RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 GRIP1Q9Y3R0 1128 aa13.32□□□□□ -0.28
LINC00339-209ENST00000635450 LHFPL6Q9Y693 200 aa13.32□□□□□ -0.28
LINC00339-209ENST00000635450 OR6C6A6NF89 314 aa13.31□□□□□ -0.28
LINC00339-209ENST00000635450 CLPTM1O96005 669 aa13.31□□□□□ -0.28
LINC00339-209ENST00000635450 TFP02787 698 aa13.31□□□□□ -0.28
LINC00339-209ENST00000635450 MT-ND5P03915 603 aa13.31□□□□□ -0.28
LINC00339-209ENST00000635450 FAM157CP0CG43 387 aa13.31□□□□□ -0.28
LINC00339-209ENST00000635450 PAICSP22234 425 aaKnown RBP13.31□□□□□ -0.28
LINC00339-209ENST00000635450 FMO3P31513 532 aa13.31□□□□□ -0.28
LINC00339-209ENST00000635450 SLC25A1P53007 311 aa13.31□□□□□ -0.28
LINC00339-209ENST00000635450 PPP1CBP62140 327 aa13.31□□□□□ -0.28
LINC00339-209ENST00000635450 GINS1Q14691 196 aa13.31□□□□□ -0.28
LINC00339-209ENST00000635450 CCDC92Q53HC0 331 aaPredicted RBP13.31□□□□□ -0.28
LINC00339-209ENST00000635450 ELFN2Q5R3F8 820 aa13.31□□□□□ -0.28
LINC00339-209ENST00000635450 ZNF362Q5T0B9 420 aaPredicted RBP13.31□□□□□ -0.28
LINC00339-209ENST00000635450 CORO6Q6QEF8 472 aa13.31□□□□□ -0.28
LINC00339-209ENST00000635450 LINC00346Q8IVM7 164 aa13.31□□□□□ -0.28
LINC00339-209ENST00000635450 IQCF1Q8N6M8 205 aa13.31□□□□□ -0.28
LINC00339-209ENST00000635450 SLC25A40Q8TBP6 338 aa13.31□□□□□ -0.28
LINC00339-209ENST00000635450 OTULINQ96BN8 352 aa13.31□□□□□ -0.28
LINC00339-209ENST00000635450 DCLRE1CQ96SD1 692 aaKnown RBP13.31□□□□□ -0.28
LINC00339-209ENST00000635450 DDOQ99489 341 aa13.31□□□□□ -0.28
LINC00339-209ENST00000635450 RBM4Q9BWF3 364 aaKnown RBP13.31□□□□□ -0.28
LINC00339-209ENST00000635450 OR2J1Q9GZK6 312 aa13.31□□□□□ -0.28
LINC00339-209ENST00000635450 HDHD2Q9H0R4 259 aa13.31□□□□□ -0.28
LINC00339-209ENST00000635450 PAPOLBQ9NRJ5 636 aaKnown RBP13.31□□□□□ -0.28
LINC00339-209ENST00000635450 TBCCD1Q9NVR7 557 aa13.31□□□□□ -0.28
LINC00339-209ENST00000635450 IGLV3-9A0A075B6K5 115 aa13.3□□□□□ -0.28
LINC00339-209ENST00000635450 LOC100289279A0A1B0GTE1 492 aa13.3□□□□□ -0.28
LINC00339-209ENST00000635450 RNF212BA8MTL3 300 aa13.3□□□□□ -0.28
LINC00339-209ENST00000635450 G3V2T6 193 aa13.3□□□□□ -0.28
LINC00339-209ENST00000635450 H3BSA7 217 aa13.3□□□□□ -0.28
LINC00339-209ENST00000635450 LMX1BO60663 402 aa13.3□□□□□ -0.28
LINC00339-209ENST00000635450 ICMTO60725 284 aa13.3□□□□□ -0.28
LINC00339-209ENST00000635450 LILRA1O75019 489 aa13.3□□□□□ -0.28
LINC00339-209ENST00000635450 NCR1O76036 304 aa13.3□□□□□ -0.28
LINC00339-209ENST00000635450 HMGN1P05114 100 aa13.3□□□□□ -0.28
LINC00339-209ENST00000635450 ZNF23P17027 643 aa13.3□□□□□ -0.28
LINC00339-209ENST00000635450 TUBG1P23258 451 aa13.3□□□□□ -0.28
LINC00339-209ENST00000635450 GIFP27352 417 aa13.3□□□□□ -0.28
LINC00339-209ENST00000635450 GZMKP49863 264 aa13.3□□□□□ -0.28
LINC00339-209ENST00000635450 BLVRAP53004 296 aa13.3□□□□□ -0.28
LINC00339-209ENST00000635450 HIST1H3AP68431 136 aa13.3□□□□□ -0.28
LINC00339-209ENST00000635450 DBPQ10586 325 aaPredicted RBP13.3□□□□□ -0.28
LINC00339-209ENST00000635450 ALKBH6Q3KRA9 238 aa13.3□□□□□ -0.28
LINC00339-209ENST00000635450 SPATA46Q5T0L3 261 aa13.3□□□□□ -0.28
LINC00339-209ENST00000635450 HIST2H3PS2Q5TEC6 136 aa13.3□□□□□ -0.28
LINC00339-209ENST00000635450 TMEM154Q6P9G4 183 aa13.3□□□□□ -0.28
LINC00339-209ENST00000635450 RFPL4BQ6ZWI9 263 aa13.3□□□□□ -0.28
LINC00339-209ENST00000635450 HIST2H3AQ71DI3 136 aa13.3□□□□□ -0.28
LINC00339-209ENST00000635450 OR51L1Q8NGJ5 315 aa13.3□□□□□ -0.28
LINC00339-209ENST00000635450 OR6K6Q8NGW6 343 aa13.3□□□□□ -0.28
LINC00339-209ENST00000635450 IPCEF1Q8WWN9 437 aaPredicted RBP13.3□□□□□ -0.28
LINC00339-209ENST00000635450 PLEKHA8Q96JA3 519 aa13.3□□□□□ -0.28
LINC00339-209ENST00000635450 COG8Q96MW5 612 aa13.3□□□□□ -0.28
LINC00339-209ENST00000635450 PITX2Q99697 317 aa13.3□□□□□ -0.28
LINC00339-209ENST00000635450 COQ7Q99807 217 aa13.3□□□□□ -0.28
LINC00339-209ENST00000635450 TUBG2Q9NRH3 451 aa13.3□□□□□ -0.28
LINC00339-209ENST00000635450 MRPL22Q9NWU5 206 aaKnown RBP13.3□□□□□ -0.28
LINC00339-209ENST00000635450 CDC42EP3Q9UKI2 254 aa13.3□□□□□ -0.28
LINC00339-209ENST00000635450 TVP23AA6NH52 213 aa13.29□□□□□ -0.28
LINC00339-209ENST00000635450 PHF1O43189 567 aaPredicted RBP13.29□□□□□ -0.28
LINC00339-209ENST00000635450 NGFP01138 241 aa13.29□□□□□ -0.28
LINC00339-209ENST00000635450 IGHV3-13P01766 116 aa13.29□□□□□ -0.28
LINC00339-209ENST00000635450 HPXP02790 462 aa13.29□□□□□ -0.28
LINC00339-209ENST00000635450 GYPBP06028 91 aa13.29□□□□□ -0.28
LINC00339-209ENST00000635450 NAT2P11245 290 aa13.29□□□□□ -0.28
LINC00339-209ENST00000635450 SPI1P17947 270 aa13.29□□□□□ -0.28
LINC00339-209ENST00000635450 RGS6P49758 472 aa13.29□□□□□ -0.28
LINC00339-209ENST00000635450 ECH1Q13011 328 aa13.29□□□□□ -0.28
LINC00339-209ENST00000635450 RIN1Q13671 783 aa13.29□□□□□ -0.28
LINC00339-209ENST00000635450 MBNL2Q5VZF2 373 aaKnown RBP13.29□□□□□ -0.28
LINC00339-209ENST00000635450 FAM166AQ6J272 317 aa13.29□□□□□ -0.28
LINC00339-209ENST00000635450 SLC18B1Q6NT16 456 aa13.29□□□□□ -0.28
LINC00339-209ENST00000635450 ACSM5Q6NUN0 579 aa13.29□□□□□ -0.28
LINC00339-209ENST00000635450 AMIGO2Q86SJ2 522 aa13.29□□□□□ -0.28
LINC00339-209ENST00000635450 ZDHHC13Q8IUH4 622 aa13.29□□□□□ -0.28
LINC00339-209ENST00000635450 C10orf67Q8IYJ2 551 aa13.29□□□□□ -0.28
LINC00339-209ENST00000635450 OR5L1Q8NGL2 311 aa13.29□□□□□ -0.28
LINC00339-209ENST00000635450 KLF14Q8TD94 323 aaPredicted RBP13.29□□□□□ -0.28
LINC00339-209ENST00000635450 UBASH3BQ8TF42 649 aa13.29□□□□□ -0.28
LINC00339-209ENST00000635450 LRTOMTQ8WZ04 291 aa13.29□□□□□ -0.28
LINC00339-209ENST00000635450 SLC7A6Q92536 515 aa13.29□□□□□ -0.28
LINC00339-209ENST00000635450 GTF3AQ92664 365 aaKnown RBP13.29□□□□□ -0.28
LINC00339-209ENST00000635450 MARS2Q96GW9 593 aaKnown RBP13.29□□□□□ -0.28
LINC00339-209ENST00000635450 BEX2Q9BXY8 128 aa13.29□□□□□ -0.28
LINC00339-209ENST00000635450 NMNAT2Q9BZQ4 307 aa13.29□□□□□ -0.28
LINC00339-209ENST00000635450 TMEM160Q9NX00 188 aa13.29□□□□□ -0.28
LINC00339-209ENST00000635450 CYB5R1Q9UHQ9 305 aa13.29□□□□□ -0.28
LINC00339-209ENST00000635450 PLSCR5A0PG75 271 aa13.28□□□□□ -0.28
LINC00339-209ENST00000635450 PRR23D1E9PI22 279 aaPredicted RBP13.28□□□□□ -0.28
LINC00339-209ENST00000635450 J3QW42 95 aa13.28□□□□□ -0.28
LINC00339-209ENST00000635450 PRR23D2P0DMB1 279 aaPredicted RBP13.28□□□□□ -0.28
LINC00339-209ENST00000635450 GGT2P36268 569 aa13.28□□□□□ -0.28
LINC00339-209ENST00000635450 LIPAP38571 399 aa13.28□□□□□ -0.28
LINC00339-209ENST00000635450 ENTPD1P49961 510 aa13.28□□□□□ -0.28
LINC00339-209ENST00000635450 DAPP51397 102 aa13.28□□□□□ -0.28
LINC00339-209ENST00000635450 CRISP1P54107 249 aa13.28□□□□□ -0.28
LINC00339-209ENST00000635450 ACTR3P61158 418 aa13.28□□□□□ -0.28
LINC00339-209ENST00000635450 CDK5Q00535 292 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms