RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 CRADDP78560 199 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 CBX1P83916 185 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 ZNF33BQ06732 778 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 LRRC74AQ0VAA2 488 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 RIPK1Q13546 671 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 EIF2B1Q14232 305 aaKnown RBP1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 ABRAXAS2Q15018 415 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 TPSAB1Q15661 275 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 PPP1R3AQ16821 1122 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 ACSBG2Q5FVE4 666 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 SPINK14Q6IE38 97 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 ZNF613Q6PF04 617 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 SBSNQ6UWP8 590 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 BTNL3Q6UXE8 466 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 PAMR1Q6UXH9 720 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 ZNF841Q6ZN19 808 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 LRRC70Q7Z2Q7 622 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 TSEN54Q7Z6J9 526 aaKnown RBP1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 LINC00523Q86TU6 105 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 PRSS58Q8IYP2 241 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 ZNF679Q8IYX0 411 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 KIF2BQ8N4N8 673 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 C2orf73Q8N5S3 287 aaPredicted RBP1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 ZNF740Q8NDX6 193 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 PLPP5Q8NEB5 264 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 OR5T3Q8NGG3 340 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 OR9A1PQ8NGU1 263 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 OR9A4Q8NGU2 314 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 LILRB4Q8NHJ6 448 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 NANPQ8TBE9 248 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 PNPT1Q8TCS8 783 aaKnown RBP1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 NPRL2Q8WTW4 380 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 TSLPQ969D9 159 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 SMIM10Q96HG1 83 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 POM121L2Q96KW2 1035 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 CCDC42Q96M95 316 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 OR4K3Q96R72 315 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 CYTH2Q99418 400 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 OPRPNQ99935 248 aaPredicted RBP1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 ATF6BQ99941 703 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 FRMD8P1Q9BZ68 369 aaPredicted RBP1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 OCR1Q9BZK8 76 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 SLC7A5P2Q9GIP4 190 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 COMMD4Q9H0A8 199 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 SPNS1Q9H2V7 528 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 LIME1Q9H400 295 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 PLEKHF2Q9H8W4 249 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 ELL3Q9HB65 397 aaPredicted RBP1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 MRPS30Q9NP92 439 aaKnown RBP1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 ESM1Q9NQ30 184 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 CHRAC1Q9NRG0 131 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 ZNHIT6Q9NWK9 470 aaKnown RBP1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 RNF14Q9UBS8 474 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 TAC3Q9UHF0 121 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 GNPTGQ9UJJ9 305 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 MGAT4AQ9UM21 535 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 NPIPA1Q9UND3 350 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 RABL2BQ9UNT1 228 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 MRPS33Q9Y291 106 aaKnown RBP1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 GSTK1Q9Y2Q3 226 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 RRP15Q9Y3B9 282 aaKnown RBP1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 AUP1Q9Y679 476 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 SLC22A7Q9Y694 548 aa1.97□□□□□ -2.09
SMARCB1-208ENST00000634926 MED12Q93074 2177 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 LYSTQ99698 3801 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 ROS1P08922 2347 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 KMT2CQ8NEZ4 4911 aaKnown RBP1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 FREM3P0C091 2139 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 MED12LQ86YW9 2145 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 ARID1AO14497 2285 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 COL7A1Q02388 2944 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 TRBV7-9A0A0J9YWB2 115 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 A0A1B0GTH9 108 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 NKX2-6A6NCS4 301 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 MIF4GDA9UHW6 222 aaKnown RBP1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 EPM2AB3EWF7 344 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 B4DXG7 233 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 TXNDC9O14530 226 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 GPRIN2O60269 458 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 LCMT2O60294 686 aaKnown RBP1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 SNNO75324 88 aaPredicted RBP1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 SNX4O95219 450 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 CATP04040 527 aaKnown RBP1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 CLPSP04118 112 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 IGKV3-11P04433 115 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 HCKP08631 526 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 MPC1LP0DKB6 136 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 ANXA3P12429 323 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 BCKDHAP12694 445 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 HSD17B1P14061 328 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 CPN1P15169 458 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 IGFBP5P24593 272 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 LOXP28300 417 aaPredicted RBP1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 RPL22P35268 128 aaKnown RBP1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 SPRP35270 261 aaPredicted RBP1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 OPRM1P35372 400 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 HSD17B2P37059 387 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 MAGEA1P43355 309 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 NUP107P57740 925 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 RPS15AP62244 130 aaKnown RBP1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms