RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 COX5BP10606 129 aa10.7□□□□□ -0.7
LINC00339-206ENST00000634451 GUCY1A3Q02108 690 aa10.7□□□□□ -0.7
LINC00339-206ENST00000634451 SCRN3Q0VDG4 424 aa10.7□□□□□ -0.7
LINC00339-206ENST00000634451 BEND6Q5SZJ8 279 aaPredicted RBP10.7□□□□□ -0.7
LINC00339-206ENST00000634451 WDR25Q64LD2 544 aaPredicted RBP10.7□□□□□ -0.7
LINC00339-206ENST00000634451 CORO6Q6QEF8 472 aa10.7□□□□□ -0.7
LINC00339-206ENST00000634451 Q6YL49 198 aa10.7□□□□□ -0.7
LINC00339-206ENST00000634451 C17orf107Q6ZR85 190 aa10.7□□□□□ -0.7
LINC00339-206ENST00000634451 ZER1Q7Z7L7 766 aa10.7□□□□□ -0.7
LINC00339-206ENST00000634451 PDZD9Q8IXQ8 264 aa10.7□□□□□ -0.7
LINC00339-206ENST00000634451 FGFRL1Q8N441 504 aa10.7□□□□□ -0.7
LINC00339-206ENST00000634451 OR8G5Q8NG78 346 aa10.7□□□□□ -0.7
LINC00339-206ENST00000634451 OR1F12Q8NHA8 337 aa10.7□□□□□ -0.7
LINC00339-206ENST00000634451 PRRC1Q96M27 445 aa10.7□□□□□ -0.7
LINC00339-206ENST00000634451 RBM4BQ9BQ04 359 aaKnown RBP10.7□□□□□ -0.7
LINC00339-206ENST00000634451 PRDM13Q9H4Q3 707 aa10.7□□□□□ -0.7
LINC00339-206ENST00000634451 IL20RAQ9UHF4 553 aa10.7□□□□□ -0.7
LINC00339-206ENST00000634451 BAG5Q9UL15 447 aa10.7□□□□□ -0.7
LINC00339-206ENST00000634451 TMCC3Q9ULS5 477 aa10.7□□□□□ -0.7
LINC00339-206ENST00000634451 COA3Q9Y2R0 106 aaPredicted RBP10.7□□□□□ -0.7
LINC00339-206ENST00000634451 TEX13CA0A0J9YWL9 993 aa10.69□□□□□ -0.7
LINC00339-206ENST00000634451 C5orf63A6NC05 138 aa10.69□□□□□ -0.7
LINC00339-206ENST00000634451 GMNCA6NCL1 334 aa10.69□□□□□ -0.7
LINC00339-206ENST00000634451 A6NIZ1 184 aa10.69□□□□□ -0.7
LINC00339-206ENST00000634451 EFCAB9A8MZ26 197 aa10.69□□□□□ -0.7
LINC00339-206ENST00000634451 IGHV4-59P01825 116 aa10.69□□□□□ -0.7
LINC00339-206ENST00000634451 PPIAL4GP0DN37 164 aa10.69□□□□□ -0.7
LINC00339-206ENST00000634451 RAC2P15153 192 aa10.69□□□□□ -0.7
LINC00339-206ENST00000634451 CFHR2P36980 270 aa10.69□□□□□ -0.7
LINC00339-206ENST00000634451 RAP1BP61224 184 aa10.69□□□□□ -0.7
LINC00339-206ENST00000634451 RAP1AP62834 184 aa10.69□□□□□ -0.7
LINC00339-206ENST00000634451 ELF3P78545 371 aaPredicted RBP10.69□□□□□ -0.7
LINC00339-206ENST00000634451 MAB21L1Q13394 359 aa10.69□□□□□ -0.7
LINC00339-206ENST00000634451 MPPED2Q15777 294 aa10.69□□□□□ -0.7
LINC00339-206ENST00000634451 RSPO1Q2MKA7 263 aaPredicted RBP10.69□□□□□ -0.7
LINC00339-206ENST00000634451 ARL9Q6T311 187 aa10.69□□□□□ -0.7
LINC00339-206ENST00000634451 PTCHD4Q6ZW05 846 aa10.69□□□□□ -0.7
LINC00339-206ENST00000634451 FAM122BQ7Z309 247 aa10.69□□□□□ -0.7
LINC00339-206ENST00000634451 OAFQ86UD1 273 aa10.69□□□□□ -0.7
LINC00339-206ENST00000634451 C1orf174Q8IYL3 243 aa10.69□□□□□ -0.7
LINC00339-206ENST00000634451 OR8B3Q8NGG8 313 aa10.69□□□□□ -0.7
LINC00339-206ENST00000634451 PTP4A1Q93096 173 aa10.69□□□□□ -0.7
LINC00339-206ENST00000634451 TSSK2Q96PF2 358 aa10.69□□□□□ -0.7
LINC00339-206ENST00000634451 OR8B2Q96RD0 313 aa10.69□□□□□ -0.7
LINC00339-206ENST00000634451 SYT4Q9H2B2 425 aa10.69□□□□□ -0.7
LINC00339-206ENST00000634451 RASSF4Q9H2L5 321 aa10.69□□□□□ -0.7
LINC00339-206ENST00000634451 BEX1Q9HBH7 125 aa10.69□□□□□ -0.7
LINC00339-206ENST00000634451 SMURF1Q9HCE7 757 aa10.69□□□□□ -0.7
LINC00339-206ENST00000634451 UFSP2Q9NUQ7 469 aa10.69□□□□□ -0.7
LINC00339-206ENST00000634451 ARMCX1Q9P291 453 aa10.69□□□□□ -0.7
LINC00339-206ENST00000634451 A0A087WUU8 490 aa10.68□□□□□ -0.7
LINC00339-206ENST00000634451 CLPSL1A2RUU4 121 aa10.68□□□□□ -0.7
LINC00339-206ENST00000634451 PRSS37A4D1T9 235 aa10.68□□□□□ -0.7
LINC00339-206ENST00000634451 DCTN6O00399 190 aa10.68□□□□□ -0.7
LINC00339-206ENST00000634451 SLC16A7O60669 478 aa10.68□□□□□ -0.7
LINC00339-206ENST00000634451 FAM20BO75063 409 aa10.68□□□□□ -0.7
LINC00339-206ENST00000634451 NR2C1P13056 603 aa10.68□□□□□ -0.7
LINC00339-206ENST00000634451 MMP9P14780 707 aa10.68□□□□□ -0.7
LINC00339-206ENST00000634451 RPL4P36578 427 aaKnown RBP10.68□□□□□ -0.7
LINC00339-206ENST00000634451 DLX1P56177 255 aa10.68□□□□□ -0.7
LINC00339-206ENST00000634451 PRKCDQ05655 676 aa10.68□□□□□ -0.7
LINC00339-206ENST00000634451 AQP6Q13520 282 aa10.68□□□□□ -0.7
LINC00339-206ENST00000634451 CLEC12AQ5QGZ9 265 aa10.68□□□□□ -0.7
LINC00339-206ENST00000634451 FAM205BPQ63HN1 556 aa10.68□□□□□ -0.7
LINC00339-206ENST00000634451 SFRP4Q6FHJ7 346 aaPredicted RBP10.68□□□□□ -0.7
LINC00339-206ENST00000634451 FBXW12Q6X9E4 464 aa10.68□□□□□ -0.7
LINC00339-206ENST00000634451 TSEN54Q7Z6J9 526 aaKnown RBP10.68□□□□□ -0.7
LINC00339-206ENST00000634451 SYT9Q86SS6 491 aa10.68□□□□□ -0.7
LINC00339-206ENST00000634451 NAA40Q86UY6 237 aa10.68□□□□□ -0.7
LINC00339-206ENST00000634451 BOLLQ8N9W6 283 aaKnown RBP10.68□□□□□ -0.7
LINC00339-206ENST00000634451 OR4F5Q8NH21 305 aa10.68□□□□□ -0.7
LINC00339-206ENST00000634451 LINC01006Q8NI28 216 aa10.68□□□□□ -0.7
LINC00339-206ENST00000634451 RASSF5Q8WWW0 418 aa10.68□□□□□ -0.7
LINC00339-206ENST00000634451 SLC30A2Q9BRI3 323 aa10.68□□□□□ -0.7
LINC00339-206ENST00000634451 SEMA6AQ9H2E6 1030 aa10.68□□□□□ -0.7
LINC00339-206ENST00000634451 RABEP2Q9H5N1 569 aa10.68□□□□□ -0.7
LINC00339-206ENST00000634451 CLN8Q9UBY8 286 aa10.68□□□□□ -0.7
LINC00339-206ENST00000634451 MIOXQ9UGB7 285 aa10.68□□□□□ -0.7
LINC00339-206ENST00000634451 LHFPL6Q9Y693 200 aa10.68□□□□□ -0.7
LINC00339-206ENST00000634451 NOTCH3Q9UM47 2321 aa10.67□□□□□ -0.7
LINC00339-206ENST00000634451 A0A0G2JND7 137 aa10.67□□□□□ -0.7
LINC00339-206ENST00000634451 A0A0U1RQK1 487 aa10.67□□□□□ -0.7
LINC00339-206ENST00000634451 CENPVL3A0A0U1RRI6 287 aa10.67□□□□□ -0.7
LINC00339-206ENST00000634451 A0A1B0GW55 424 aa10.67□□□□□ -0.7
LINC00339-206ENST00000634451 C3orf80F5H4A9 247 aa10.67□□□□□ -0.7
LINC00339-206ENST00000634451 SURF4O15260 269 aa10.67□□□□□ -0.7
LINC00339-206ENST00000634451 GPR137BO60478 399 aa10.67□□□□□ -0.7
LINC00339-206ENST00000634451 NDUFA7O95182 113 aa10.67□□□□□ -0.7
LINC00339-206ENST00000634451 PRB2P02812 416 aaPredicted RBP10.67□□□□□ -0.7
LINC00339-206ENST00000634451 CD14P08571 375 aa10.67□□□□□ -0.7
LINC00339-206ENST00000634451 DUX4L2P0CJ85 424 aa10.67□□□□□ -0.7
LINC00339-206ENST00000634451 DUX4L3P0CJ86 424 aa10.67□□□□□ -0.7
LINC00339-206ENST00000634451 DUX4L4P0CJ87 422 aa10.67□□□□□ -0.7
LINC00339-206ENST00000634451 DUX4L5P0CJ88 424 aa10.67□□□□□ -0.7
LINC00339-206ENST00000634451 DUX4L6P0CJ89 424 aa10.67□□□□□ -0.7
LINC00339-206ENST00000634451 DUX4L7P0CJ90 424 aa10.67□□□□□ -0.7
LINC00339-206ENST00000634451 KDELR2P33947 212 aa10.67□□□□□ -0.7
LINC00339-206ENST00000634451 GUCA1AP43080 201 aaPredicted RBP10.67□□□□□ -0.7
LINC00339-206ENST00000634451 FXYD6P3P58550 94 aa10.67□□□□□ -0.7
LINC00339-206ENST00000634451 ST3GAL3Q11203 375 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms