RNA–Protein interactions for RNA: ENST00000630499.2

SRRM2-231, Transcript of serine/arginine repetitive matrix 2, human

TSL 1 (best) BASIC

Gene SRRM2, Length 1,207 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM2-231	ENST00000630499	NMNAT1	Q9HAN9	279 aa	Predicted RBP	18.64	■□□□□ 0.57
SRRM2-231	ENST00000630499	COA3	Q9Y2R0	106 aa	Predicted RBP	18.64	■□□□□ 0.57
SRRM2-231	ENST00000630499	SOX21	Q9Y651	276 aa	Predicted RBP	18.64	■□□□□ 0.57
SRRM2-231	ENST00000630499	CXCR6	O00574	342 aa		18.63	■□□□□ 0.57
SRRM2-231	ENST00000630499	NME4	O00746	187 aa		18.63	■□□□□ 0.57
SRRM2-231	ENST00000630499	SURF4	O15260	269 aa		18.63	■□□□□ 0.57
SRRM2-231	ENST00000630499	MLNR	O43193	412 aa		18.63	■□□□□ 0.57
SRRM2-231	ENST00000630499	PLAT	P00750	562 aa		18.63	■□□□□ 0.57
SRRM2-231	ENST00000630499	CPT2	P23786	658 aa		18.63	■□□□□ 0.57
SRRM2-231	ENST00000630499	SDHA	P31040	664 aa		18.63	■□□□□ 0.57
SRRM2-231	ENST00000630499	RPL4	P36578	427 aa	Known RBP	18.63	■□□□□ 0.57
SRRM2-231	ENST00000630499	LIPE	Q05469	1076 aa		18.63	■□□□□ 0.57
SRRM2-231	ENST00000630499	KRR1	Q13601	381 aa	Known RBP	18.63	■□□□□ 0.57
SRRM2-231	ENST00000630499	RSPO1	Q2MKA7	263 aa	Predicted RBP	18.63	■□□□□ 0.57
SRRM2-231	ENST00000630499	KRTAP27-1	Q3LI81	207 aa		18.63	■□□□□ 0.57
SRRM2-231	ENST00000630499	IFI44L	Q53G44	452 aa		18.63	■□□□□ 0.57
SRRM2-231	ENST00000630499	RBMS3	Q6XE24	437 aa	Known RBP	18.63	■□□□□ 0.57
SRRM2-231	ENST00000630499	PTCHD4	Q6ZW05	846 aa		18.63	■□□□□ 0.57
SRRM2-231	ENST00000630499	GLB1L2	Q8IW92	636 aa		18.63	■□□□□ 0.57
SRRM2-231	ENST00000630499	MUC20	Q8N307	709 aa	Predicted RBP	18.63	■□□□□ 0.57
SRRM2-231	ENST00000630499	UPRT	Q96BW1	309 aa		18.63	■□□□□ 0.57
SRRM2-231	ENST00000630499	HSH2D	Q96JZ2	352 aa		18.63	■□□□□ 0.57
SRRM2-231	ENST00000630499	MEGF10	Q96KG7	1140 aa		18.63	■□□□□ 0.57
SRRM2-231	ENST00000630499	MRI1	Q9BV20	369 aa		18.63	■□□□□ 0.57
SRRM2-231	ENST00000630499	IFNL4	K9M1U5	179 aa		18.62	■□□□□ 0.57
SRRM2-231	ENST00000630499	XKRY	O14609	159 aa		18.62	■□□□□ 0.57
SRRM2-231	ENST00000630499	SLC22A2	O15244	555 aa		18.62	■□□□□ 0.57
SRRM2-231	ENST00000630499	RER1	O15258	196 aa		18.62	■□□□□ 0.57
SRRM2-231	ENST00000630499	TROVE2	P10155	538 aa	Known RBP eCLIP	18.62	■□□□□ 0.57	9e-6	■□□□□ 8.9
SRRM2-231	ENST00000630499	SF3A3	Q12874	501 aa	Known RBP eCLIP	18.62	■□□□□ 0.57	6e-7	■■■■□ 22
SRRM2-231	ENST00000630499	BAMBI	Q13145	260 aa		18.62	■□□□□ 0.57
SRRM2-231	ENST00000630499	SLC9A3R2	Q15599	337 aa		18.62	■□□□□ 0.57
SRRM2-231	ENST00000630499	ZNF181	Q2M3W8	571 aa		18.62	■□□□□ 0.57
SRRM2-231	ENST00000630499	ESCO2	Q56NI9	601 aa		18.62	■□□□□ 0.57
SRRM2-231	ENST00000630499	POU5F2	Q8N7G0	328 aa		18.62	■□□□□ 0.57
SRRM2-231	ENST00000630499	OR8G5	Q8NG78	346 aa		18.62	■□□□□ 0.57
SRRM2-231	ENST00000630499	OR10AD1	Q8NGE0	317 aa		18.62	■□□□□ 0.57
SRRM2-231	ENST00000630499	ZNF420	Q8TAQ5	688 aa	Predicted RBP	18.62	■□□□□ 0.57
SRRM2-231	ENST00000630499	FAM46A	Q96IP4	442 aa	Known RBP	18.62	■□□□□ 0.57
SRRM2-231	ENST00000630499	SLC30A2	Q9BRI3	323 aa		18.62	■□□□□ 0.57
SRRM2-231	ENST00000630499	CCDC134	Q9H6E4	229 aa		18.62	■□□□□ 0.57
SRRM2-231	ENST00000630499	AP3M1	Q9Y2T2	418 aa		18.62	■□□□□ 0.57
SRRM2-231	ENST00000630499	LHFPL6	Q9Y693	200 aa		18.62	■□□□□ 0.57
SRRM2-231	ENST00000630499	CAPN7	Q9Y6W3	813 aa		18.62	■□□□□ 0.57
SRRM2-231	ENST00000630499	ENPP4	Q9Y6X5	453 aa		18.62	■□□□□ 0.57
SRRM2-231	ENST00000630499		H0YL77	283 aa		18.61	■□□□□ 0.57
SRRM2-231	ENST00000630499	DCTN6	O00399	190 aa		18.61	■□□□□ 0.57
SRRM2-231	ENST00000630499	SLC16A7	O60669	478 aa		18.61	■□□□□ 0.57
SRRM2-231	ENST00000630499	KHDRBS3	O75525	346 aa	Known RBP	18.61	■□□□□ 0.57
SRRM2-231	ENST00000630499	ZNF682	O95780	498 aa		18.61	■□□□□ 0.57
SRRM2-231	ENST00000630499	TXNDC12	O95881	172 aa		18.61	■□□□□ 0.57
SRRM2-231	ENST00000630499	PMEL	P40967	661 aa		18.61	■□□□□ 0.57
SRRM2-231	ENST00000630499	OMP	P47874	163 aa		18.61	■□□□□ 0.57
SRRM2-231	ENST00000630499	RGS6	P49758	472 aa		18.61	■□□□□ 0.57
SRRM2-231	ENST00000630499	GPR139	Q6DWJ6	353 aa		18.61	■□□□□ 0.57
SRRM2-231	ENST00000630499	OR2T2	Q6IF00	324 aa		18.61	■□□□□ 0.57
SRRM2-231	ENST00000630499	C1orf94	Q6P1W5	598 aa		18.61	■□□□□ 0.57
SRRM2-231	ENST00000630499	COLCA1	Q6ZS62	124 aa		18.61	■□□□□ 0.57
SRRM2-231	ENST00000630499	ARPIN	Q7Z6K5	226 aa		18.61	■□□□□ 0.57
SRRM2-231	ENST00000630499	OR5AS1	Q8N127	324 aa		18.61	■□□□□ 0.57
SRRM2-231	ENST00000630499	FUZ	Q9BT04	418 aa		18.61	■□□□□ 0.57
SRRM2-231	ENST00000630499	SSBP3	Q9BWW4	388 aa	Predicted RBP	18.61	■□□□□ 0.57
SRRM2-231	ENST00000630499	NUAK2	Q9H093	628 aa		18.61	■□□□□ 0.57
SRRM2-231	ENST00000630499	PTTG3P	Q9NZH4	202 aa		18.61	■□□□□ 0.57
SRRM2-231	ENST00000630499	ARMCX1	Q9P291	453 aa		18.61	■□□□□ 0.57
SRRM2-231	ENST00000630499	OR5V1	Q9UGF6	321 aa		18.61	■□□□□ 0.57
SRRM2-231	ENST00000630499	IL20RA	Q9UHF4	553 aa		18.61	■□□□□ 0.57
SRRM2-231	ENST00000630499	TMEM5	Q9Y2B1	443 aa		18.61	■□□□□ 0.57
SRRM2-231	ENST00000630499	NOTCH1	P46531	2555 aa		18.61	■□□□□ 0.57
SRRM2-231	ENST00000630499	IGHV2-70D	A0A0C4DH43	119 aa		18.6	■□□□□ 0.57
SRRM2-231	ENST00000630499		A0A1W2PRQ8	180 aa		18.6	■□□□□ 0.57
SRRM2-231	ENST00000630499	NDUFB2	O95178	105 aa		18.6	■□□□□ 0.57
SRRM2-231	ENST00000630499	GPANK1	O95872	356 aa		18.6	■□□□□ 0.57
SRRM2-231	ENST00000630499	CYB5R3	P00387	301 aa	Predicted RBP	18.6	■□□□□ 0.57
SRRM2-231	ENST00000630499	CDKN2A	P42771	156 aa	Known RBP	18.6	■□□□□ 0.57
SRRM2-231	ENST00000630499	DGCR6	Q14129	220 aa		18.6	■□□□□ 0.57
SRRM2-231	ENST00000630499	SLC27A4	Q6P1M0	643 aa		18.6	■□□□□ 0.57
SRRM2-231	ENST00000630499	LEG1	Q6P5S2	330 aa		18.6	■□□□□ 0.57
SRRM2-231	ENST00000630499	ADCK1	Q86TW2	530 aa		18.6	■□□□□ 0.57
SRRM2-231	ENST00000630499	KLB	Q86Z14	1044 aa		18.6	■□□□□ 0.57
SRRM2-231	ENST00000630499	PARP8	Q8N3A8	854 aa		18.6	■□□□□ 0.57
SRRM2-231	ENST00000630499	OR13G1	Q8NGZ3	307 aa		18.6	■□□□□ 0.57
SRRM2-231	ENST00000630499	TAF15	Q92804	592 aa	Known RBP eCLIP	18.6	■□□□□ 0.57	3e-22	■■□□□ 13.4
SRRM2-231	ENST00000630499	TMEM246	Q9BRR3	403 aa		18.6	■□□□□ 0.57
SRRM2-231	ENST00000630499	PRDM13	Q9H4Q3	707 aa		18.6	■□□□□ 0.57
SRRM2-231	ENST00000630499	UNKL	Q9H9P5	680 aa	Known RBP	18.6	■□□□□ 0.57
SRRM2-231	ENST00000630499	IGLV1-36	A0A0B4J1U3	117 aa		18.59	■□□□□ 0.57
SRRM2-231	ENST00000630499	IQCF6	A8MYZ5	107 aa		18.59	■□□□□ 0.57
SRRM2-231	ENST00000630499	ZNF205	O95201	554 aa		18.59	■□□□□ 0.57
SRRM2-231	ENST00000630499	SERPINA1	P01009	418 aa		18.59	■□□□□ 0.57
SRRM2-231	ENST00000630499	MDH1	P40925	334 aa	Known RBP	18.59	■□□□□ 0.57
SRRM2-231	ENST00000630499	GSK3B	P49841	420 aa		18.59	■□□□□ 0.57
SRRM2-231	ENST00000630499	SEC23B	Q15437	767 aa		18.59	■□□□□ 0.57
SRRM2-231	ENST00000630499	ZNF404	Q494X3	552 aa		18.59	■□□□□ 0.57
SRRM2-231	ENST00000630499	OR52E2	Q8NGJ4	325 aa		18.59	■□□□□ 0.57
SRRM2-231	ENST00000630499	RP9	Q8TA86	221 aa	Known RBP	18.59	■□□□□ 0.57
SRRM2-231	ENST00000630499	APOBEC3D	Q96AK3	386 aa	Predicted RBP	18.59	■□□□□ 0.57
SRRM2-231	ENST00000630499	COQ7	Q99807	217 aa		18.59	■□□□□ 0.57
SRRM2-231	ENST00000630499	NDUFAF4	Q9P032	175 aa		18.59	■□□□□ 0.57
SRRM2-231	ENST00000630499	GATA4	P43694	442 aa		18.58	■□□□□ 0.56

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms