RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 OR5L1Q8NGL2 311 aa15.89■□□□□ 0.13
SMN2-215ENST00000628696 OR13G1Q8NGZ3 307 aa15.89■□□□□ 0.13
SMN2-215ENST00000628696 RAB40AQ8WXH6 277 aa15.89■□□□□ 0.13
SMN2-215ENST00000628696 RASD2Q96D21 266 aa15.89■□□□□ 0.13
SMN2-215ENST00000628696 SYT4Q9H2B2 425 aa15.89■□□□□ 0.13
SMN2-215ENST00000628696 SAR1AQ9NR31 198 aa15.89■□□□□ 0.13
SMN2-215ENST00000628696 MRGBPQ9NV56 204 aa15.89■□□□□ 0.13
SMN2-215ENST00000628696 MIOXQ9UGB7 285 aa15.89■□□□□ 0.13
SMN2-215ENST00000628696 POLR1DQ9Y2S0 133 aa15.89■□□□□ 0.13
SMN2-215ENST00000628696 OR6C6A6NF89 314 aa15.88■□□□□ 0.13
SMN2-215ENST00000628696 H0YL77 283 aa15.88■□□□□ 0.13
SMN2-215ENST00000628696 CLDN34H7C241 214 aa15.88■□□□□ 0.13
SMN2-215ENST00000628696 RER1O15258 196 aa15.88■□□□□ 0.13
SMN2-215ENST00000628696 TROVE2P10155 538 aaKnown RBP eCLIP15.88■□□□□ 0.13
SMN2-215ENST00000628696 ZNF26P17031 533 aaPredicted RBP15.88■□□□□ 0.13
SMN2-215ENST00000628696 OMGP23515 440 aa15.88■□□□□ 0.13
SMN2-215ENST00000628696 CENPAP49450 140 aa15.88■□□□□ 0.13
SMN2-215ENST00000628696 SRP9P49458 86 aaKnown RBP15.88■□□□□ 0.13
SMN2-215ENST00000628696 LSM6P62312 80 aaKnown RBP15.88■□□□□ 0.13
SMN2-215ENST00000628696 DEFA6Q01524 100 aa15.88■□□□□ 0.13
SMN2-215ENST00000628696 KRR1Q13601 381 aaKnown RBP15.88■□□□□ 0.13
SMN2-215ENST00000628696 IFI44LQ53G44 452 aa15.88■□□□□ 0.13
SMN2-215ENST00000628696 TMPRSS11FQ6ZWK6 438 aa15.88■□□□□ 0.13
SMN2-215ENST00000628696 FKBP9P1Q75LS8 142 aa15.88■□□□□ 0.13
SMN2-215ENST00000628696 SPATC1Q76KD6 591 aa15.88■□□□□ 0.13
SMN2-215ENST00000628696 FAM122BQ7Z309 247 aa15.88■□□□□ 0.13
SMN2-215ENST00000628696 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.88■□□□□ 0.13
SMN2-215ENST00000628696 MOGAT3Q86VF5 341 aa15.88■□□□□ 0.13
SMN2-215ENST00000628696 PLEKHA8Q96JA3 519 aa15.88■□□□□ 0.13
SMN2-215ENST00000628696 ZNF582Q96NG8 517 aaPredicted RBP15.88■□□□□ 0.13
SMN2-215ENST00000628696 TMEM246Q9BRR3 403 aa15.88■□□□□ 0.13
SMN2-215ENST00000628696 TRAV40A0A0B4J280 105 aa15.87■□□□□ 0.13
SMN2-215ENST00000628696 IGHV2-70DA0A0C4DH43 119 aa15.87■□□□□ 0.13
SMN2-215ENST00000628696 MDFIC2A0A1B0GVS7 189 aa15.87■□□□□ 0.13
SMN2-215ENST00000628696 SOCS2O14508 198 aa15.87■□□□□ 0.13
SMN2-215ENST00000628696 IMPA2O14732 288 aa15.87■□□□□ 0.13
SMN2-215ENST00000628696 GSTA4O15217 222 aa15.87■□□□□ 0.13
SMN2-215ENST00000628696 PPIAL4GP0DN37 164 aa15.87■□□□□ 0.13
SMN2-215ENST00000628696 MDKP21741 143 aaPredicted RBP15.87■□□□□ 0.13
SMN2-215ENST00000628696 RGS6P49758 472 aa15.87■□□□□ 0.13
SMN2-215ENST00000628696 PAX2Q02962 417 aa15.87■□□□□ 0.13
SMN2-215ENST00000628696 FAM201AQ5SY85 155 aa15.87■□□□□ 0.13
SMN2-215ENST00000628696 FBXW12Q6X9E4 464 aa15.87■□□□□ 0.13
SMN2-215ENST00000628696 FAM156AQ8NDB6 213 aa15.87■□□□□ 0.13
SMN2-215ENST00000628696 BHLHE23Q8NDY6 225 aa15.87■□□□□ 0.13
SMN2-215ENST00000628696 ZDHHC16Q969W1 377 aa15.87■□□□□ 0.13
SMN2-215ENST00000628696 TMIGD2Q96BF3 282 aa15.87■□□□□ 0.13
SMN2-215ENST00000628696 UPRTQ96BW1 309 aa15.87■□□□□ 0.13
SMN2-215ENST00000628696 NEIL1Q96FI4 390 aaPredicted RBP15.87■□□□□ 0.13
SMN2-215ENST00000628696 FAM46AQ96IP4 442 aaKnown RBP15.87■□□□□ 0.13
SMN2-215ENST00000628696 CMTM6Q9NX76 183 aa15.87■□□□□ 0.13
SMN2-215ENST00000628696 LRRC30A6NM36 301 aa15.86■□□□□ 0.13
SMN2-215ENST00000628696 F5H5P2 479 aa15.86■□□□□ 0.13
SMN2-215ENST00000628696 CXCR6O00574 342 aa15.86■□□□□ 0.13
SMN2-215ENST00000628696 NDUFB2O95178 105 aa15.86■□□□□ 0.13
SMN2-215ENST00000628696 CPT2P23786 658 aa15.86■□□□□ 0.13
SMN2-215ENST00000628696 C16orf87Q6PH81 154 aa15.86■□□□□ 0.13
SMN2-215ENST00000628696 C9orf139Q6ZV77 190 aa15.86■□□□□ 0.13
SMN2-215ENST00000628696 NLRC3Q7RTR2 1065 aa15.86■□□□□ 0.13
SMN2-215ENST00000628696 HDXQ7Z353 690 aa15.86■□□□□ 0.13
SMN2-215ENST00000628696 POU5F2Q8N7G0 328 aa15.86■□□□□ 0.13
SMN2-215ENST00000628696 OR8B3Q8NGG8 313 aa15.86■□□□□ 0.13
SMN2-215ENST00000628696 APOBEC3DQ96AK3 386 aaPredicted RBP15.86■□□□□ 0.13
SMN2-215ENST00000628696 RCN3Q96D15 328 aa15.86■□□□□ 0.13
SMN2-215ENST00000628696 OR8B2Q96RD0 313 aa15.86■□□□□ 0.13
SMN2-215ENST00000628696 WDR76Q9H967 626 aa15.86■□□□□ 0.13
SMN2-215ENST00000628696 NMNAT1Q9HAN9 279 aaPredicted RBP15.86■□□□□ 0.13
SMN2-215ENST00000628696 TNFRSF19Q9NS68 423 aa15.86■□□□□ 0.13
SMN2-215ENST00000628696 TMEM5Q9Y2B1 443 aa15.86■□□□□ 0.13
SMN2-215ENST00000628696 PLATP00750 562 aa15.85■□□□□ 0.13
SMN2-215ENST00000628696 SDHAP31040 664 aa15.85■□□□□ 0.13
SMN2-215ENST00000628696 PITPNBP48739 271 aa15.85■□□□□ 0.13
SMN2-215ENST00000628696 LIPEQ05469 1076 aa15.85■□□□□ 0.13
SMN2-215ENST00000628696 PDLIM3Q53GG5 364 aaPredicted RBP15.85■□□□□ 0.13
SMN2-215ENST00000628696 GPR139Q6DWJ6 353 aa15.85■□□□□ 0.13
SMN2-215ENST00000628696 BRD3OSQ6XYD6 125 aa15.85■□□□□ 0.13
SMN2-215ENST00000628696 CBLL1Q75N03 491 aa15.85■□□□□ 0.13
SMN2-215ENST00000628696 CYP4Z1Q86W10 505 aa15.85■□□□□ 0.13
SMN2-215ENST00000628696 C1orf87Q8N0U7 546 aa15.85■□□□□ 0.13
SMN2-215ENST00000628696 OR10S1Q8NGN2 331 aa15.85■□□□□ 0.13
SMN2-215ENST00000628696 HSH2DQ96JZ2 352 aa15.85■□□□□ 0.13
SMN2-215ENST00000628696 SLC30A2Q9BRI3 323 aa15.85■□□□□ 0.13
SMN2-215ENST00000628696 NUDT16L1Q9BRJ7 211 aaKnown RBP15.85■□□□□ 0.13
SMN2-215ENST00000628696 NUAK2Q9H093 628 aa15.85■□□□□ 0.13
SMN2-215ENST00000628696 SLITRK2Q9H156 845 aa15.85■□□□□ 0.13
SMN2-215ENST00000628696 TMEM100Q9NV29 134 aa15.85■□□□□ 0.13
SMN2-215ENST00000628696 VSX1Q9NZR4 365 aaPredicted RBP15.85■□□□□ 0.13
SMN2-215ENST00000628696 AP3M1Q9Y2T2 418 aa15.85■□□□□ 0.13
SMN2-215ENST00000628696 IER3IP1Q9Y5U9 82 aa15.85■□□□□ 0.13
SMN2-215ENST00000628696 CAPN7Q9Y6W3 813 aa15.85■□□□□ 0.13
SMN2-215ENST00000628696 KIR2DS1A0A191URI9 304 aa15.84■□□□□ 0.13
SMN2-215ENST00000628696 J3QW42 95 aa15.84■□□□□ 0.13
SMN2-215ENST00000628696 MLNRO43193 412 aa15.84■□□□□ 0.13
SMN2-215ENST00000628696 HOXA3O43365 443 aaPredicted RBP15.84■□□□□ 0.13
SMN2-215ENST00000628696 PTP4A3O75365 173 aa15.84■□□□□ 0.13
SMN2-215ENST00000628696 SERPINA1P01009 418 aa15.84■□□□□ 0.13
SMN2-215ENST00000628696 HLA-DPB1P04440 258 aa15.84■□□□□ 0.13
SMN2-215ENST00000628696 IRF2P14316 349 aa15.84■□□□□ 0.13
SMN2-215ENST00000628696 SELEP16581 610 aa15.84■□□□□ 0.13
SMN2-215ENST00000628696 PMELP40967 661 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms