RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 C6orf52Q5T4I8 152 aa12.72□□□□□ -0.37
PNKP-221ENST00000627317 ZNF454Q8N9F8 522 aa12.72□□□□□ -0.37
PNKP-221ENST00000627317 OR51G2Q8NGK0 314 aa12.72□□□□□ -0.37
PNKP-221ENST00000627317 AKAP1Q92667 903 aaKnown RBP eCLIP12.72□□□□□ -0.37
PNKP-221ENST00000627317 MAP6Q96JE9 813 aa12.72□□□□□ -0.37
PNKP-221ENST00000627317 POM121L2Q96KW2 1035 aa12.72□□□□□ -0.37
PNKP-221ENST00000627317 COQ7Q99807 217 aa12.72□□□□□ -0.37
PNKP-221ENST00000627317 ATF6BQ99941 703 aa12.72□□□□□ -0.37
PNKP-221ENST00000627317 YIPF3Q9GZM5 350 aa12.72□□□□□ -0.37
PNKP-221ENST00000627317 AASSQ9UDR5 926 aa12.72□□□□□ -0.37
PNKP-221ENST00000627317 LAMP5Q9UJQ1 280 aa12.72□□□□□ -0.37
PNKP-221ENST00000627317 ZFHX3Q15911 3703 aa12.71□□□□□ -0.37
PNKP-221ENST00000627317 LOC100509620A0A075B734 347 aa12.71□□□□□ -0.37
PNKP-221ENST00000627317 ZNF878C9JN71 531 aa12.71□□□□□ -0.37
PNKP-221ENST00000627317 HS3ST1O14792 307 aa12.71□□□□□ -0.37
PNKP-221ENST00000627317 LYNP07948 512 aa12.71□□□□□ -0.37
PNKP-221ENST00000627317 GNAO1P09471 354 aa12.71□□□□□ -0.37
PNKP-221ENST00000627317 ZNF35P13682 527 aa12.71□□□□□ -0.37
PNKP-221ENST00000627317 GABRB1P18505 474 aa12.71□□□□□ -0.37
PNKP-221ENST00000627317 MTNR1AP48039 350 aa12.71□□□□□ -0.37
PNKP-221ENST00000627317 TAF13Q15543 124 aa12.71□□□□□ -0.37
PNKP-221ENST00000627317 SNCBQ16143 134 aa12.71□□□□□ -0.37
PNKP-221ENST00000627317 KRT80Q6KB66 452 aa12.71□□□□□ -0.37
PNKP-221ENST00000627317 ARL9Q6T311 187 aa12.71□□□□□ -0.37
PNKP-221ENST00000627317 LRRC75A-AS1Q8N1F1 130 aa12.71□□□□□ -0.37
PNKP-221ENST00000627317 PAQR4Q8N4S7 273 aaPredicted RBP12.71□□□□□ -0.37
PNKP-221ENST00000627317 WFDC11Q8NEX6 87 aa12.71□□□□□ -0.37
PNKP-221ENST00000627317 OTOSQ8NHW6 89 aa12.71□□□□□ -0.37
PNKP-221ENST00000627317 ST7LQ8TDW4 575 aa12.71□□□□□ -0.37
PNKP-221ENST00000627317 TFAP2CQ92754 450 aa12.71□□□□□ -0.37
PNKP-221ENST00000627317 NEUROG1Q92886 237 aa12.71□□□□□ -0.37
PNKP-221ENST00000627317 SLAMF6Q96DU3 332 aa12.71□□□□□ -0.37
PNKP-221ENST00000627317 COPS4Q9BT78 406 aa12.71□□□□□ -0.37
PNKP-221ENST00000627317 ABHD6Q9BV23 337 aa12.71□□□□□ -0.37
PNKP-221ENST00000627317 ADGRL4Q9HBW9 690 aa12.71□□□□□ -0.37
PNKP-221ENST00000627317 CENPMQ9NSP4 180 aa12.71□□□□□ -0.37
PNKP-221ENST00000627317 HAO2Q9NYQ3 351 aa12.71□□□□□ -0.37
PNKP-221ENST00000627317 EIF3KQ9UBQ5 218 aaKnown RBP12.71□□□□□ -0.37
PNKP-221ENST00000627317 TMEM14AQ9Y6G1 99 aa12.71□□□□□ -0.37
PNKP-221ENST00000627317 HSPE1-MOB4S4R3N1 261 aa12.71□□□□□ -0.37
PNKP-221ENST00000627317 APOL3O95236 402 aa12.7□□□□□ -0.38
PNKP-221ENST00000627317 ABHD16AO95870 558 aa12.7□□□□□ -0.38
PNKP-221ENST00000627317 SBK2P0C263 348 aa12.7□□□□□ -0.38
PNKP-221ENST00000627317 PAX1P15863 534 aa12.7□□□□□ -0.38
PNKP-221ENST00000627317 NUDT6P53370 316 aa12.7□□□□□ -0.38
PNKP-221ENST00000627317 RPS23P62266 143 aaKnown RBP12.7□□□□□ -0.38
PNKP-221ENST00000627317 HGFACQ04756 655 aa12.7□□□□□ -0.38
PNKP-221ENST00000627317 ZNF91Q05481 1191 aa12.7□□□□□ -0.38
PNKP-221ENST00000627317 VHLLQ6RSH7 139 aa12.7□□□□□ -0.38
PNKP-221ENST00000627317 UNQ6126/PRO20091Q6UXV3 157 aa12.7□□□□□ -0.38
PNKP-221ENST00000627317 SPATC1Q76KD6 591 aa12.7□□□□□ -0.38
PNKP-221ENST00000627317 SLC35F2Q8IXU6 374 aa12.7□□□□□ -0.38
PNKP-221ENST00000627317 ZNF611Q8N823 705 aa12.7□□□□□ -0.38
PNKP-221ENST00000627317 OR10S1Q8NGN2 331 aa12.7□□□□□ -0.38
PNKP-221ENST00000627317 SMAP2Q8WU79 429 aaPredicted RBP12.7□□□□□ -0.38
PNKP-221ENST00000627317 THEM6Q8WUY1 208 aa12.7□□□□□ -0.38
PNKP-221ENST00000627317 SLC7A6Q92536 515 aa12.7□□□□□ -0.38
PNKP-221ENST00000627317 PIGTQ969N2 578 aa12.7□□□□□ -0.38
PNKP-221ENST00000627317 FBXW5Q969U6 566 aa12.7□□□□□ -0.38
PNKP-221ENST00000627317 SPTSSAQ969W0 71 aa12.7□□□□□ -0.38
PNKP-221ENST00000627317 RNFT2Q96EX2 444 aa12.7□□□□□ -0.38
PNKP-221ENST00000627317 MNTQ99583 582 aa12.7□□□□□ -0.38
PNKP-221ENST00000627317 CCL19Q99731 98 aa12.7□□□□□ -0.38
PNKP-221ENST00000627317 OR51B6Q9H340 312 aa12.7□□□□□ -0.38
PNKP-221ENST00000627317 PNRC2Q9NPJ4 139 aaKnown RBP12.7□□□□□ -0.38
PNKP-221ENST00000627317 DDX28Q9NUL7 540 aaKnown RBP12.7□□□□□ -0.38
PNKP-221ENST00000627317 CISD1Q9NZ45 108 aaKnown RBP12.7□□□□□ -0.38
PNKP-221ENST00000627317 RTTNQ86VV8 2226 aa12.7□□□□□ -0.38
PNKP-221ENST00000627317 ZANQ9Y493 2812 aa12.69□□□□□ -0.38
PNKP-221ENST00000627317 E7EQL1 145 aa12.69□□□□□ -0.38
PNKP-221ENST00000627317 ZNF670-ZNF695F2Z2N8 137 aa12.69□□□□□ -0.38
PNKP-221ENST00000627317 F5H5K5 113 aa12.69□□□□□ -0.38
PNKP-221ENST00000627317 DBHP09172 617 aa12.69□□□□□ -0.38
PNKP-221ENST00000627317 FAM157BP0CG42 384 aa12.69□□□□□ -0.38
PNKP-221ENST00000627317 DBTP11182 482 aaKnown RBP12.69□□□□□ -0.38
PNKP-221ENST00000627317 NR4A1P22736 598 aa12.69□□□□□ -0.38
PNKP-221ENST00000627317 PCSK6P29122 969 aa12.69□□□□□ -0.38
PNKP-221ENST00000627317 SLC15A1P46059 708 aa12.69□□□□□ -0.38
PNKP-221ENST00000627317 HCCSP53701 268 aa12.69□□□□□ -0.38
PNKP-221ENST00000627317 USP51Q70EK9 711 aa12.69□□□□□ -0.38
PNKP-221ENST00000627317 THAP5Q7Z6K1 395 aa12.69□□□□□ -0.38
PNKP-221ENST00000627317 NUP37Q8NFH4 326 aa12.69□□□□□ -0.38
PNKP-221ENST00000627317 CNIH3Q8TBE1 160 aa12.69□□□□□ -0.38
PNKP-221ENST00000627317 RNF133Q8WVZ7 376 aa12.69□□□□□ -0.38
PNKP-221ENST00000627317 APH1BQ8WW43 257 aa12.69□□□□□ -0.38
PNKP-221ENST00000627317 IPCEF1Q8WWN9 437 aaPredicted RBP12.69□□□□□ -0.38
PNKP-221ENST00000627317 ASB17Q8WXJ9 295 aa12.69□□□□□ -0.38
PNKP-221ENST00000627317 DCLRE1CQ96SD1 692 aaKnown RBP12.69□□□□□ -0.38
PNKP-221ENST00000627317 AMELYQ99218 206 aa12.69□□□□□ -0.38
PNKP-221ENST00000627317 DHRS9Q9BPW9 319 aa12.69□□□□□ -0.38
PNKP-221ENST00000627317 GSX2Q9BZM3 304 aa12.69□□□□□ -0.38
PNKP-221ENST00000627317 RASSF4Q9H2L5 321 aa12.69□□□□□ -0.38
PNKP-221ENST00000627317 ELOVL3Q9HB03 270 aa12.69□□□□□ -0.38
PNKP-221ENST00000627317 CA10Q9NS85 328 aa12.69□□□□□ -0.38
PNKP-221ENST00000627317 ZNF701Q9NV72 531 aaPredicted RBP12.69□□□□□ -0.38
PNKP-221ENST00000627317 FAIMQ9NVQ4 179 aa12.69□□□□□ -0.38
PNKP-221ENST00000627317 KLHDC2Q9Y2U9 406 aa12.69□□□□□ -0.38
PNKP-221ENST00000627317 GRIP1Q9Y3R0 1128 aa12.69□□□□□ -0.38
PNKP-221ENST00000627317 NIPBLQ6KC79 2804 aaeCLIP12.69□□□□□ -0.38
PNKP-221ENST00000627317 VSTM5A8MXK1 200 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms