RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 CSNK2A1P68400 391 aaPredicted RBP17.48■□□□□ 0.39
PCDHB11-202ENST00000624887 GABREP78334 506 aa17.48■□□□□ 0.39
PCDHB11-202ENST00000624887 POU4F3Q15319 338 aa17.48■□□□□ 0.39
PCDHB11-202ENST00000624887 TOMM20Q15388 145 aa17.48■□□□□ 0.39
PCDHB11-202ENST00000624887 ELFN2Q5R3F8 820 aa17.48■□□□□ 0.39
PCDHB11-202ENST00000624887 GLYATL3Q5SZD4 288 aa17.48■□□□□ 0.39
PCDHB11-202ENST00000624887 OLFML2AQ68BL7 652 aa17.48■□□□□ 0.39
PCDHB11-202ENST00000624887 CREB3L2Q70SY1 520 aa17.48■□□□□ 0.39
PCDHB11-202ENST00000624887 OR6M1Q8NGM8 313 aa17.48■□□□□ 0.39
PCDHB11-202ENST00000624887 LIN37Q96GY3 246 aaPredicted RBP17.48■□□□□ 0.39
PCDHB11-202ENST00000624887 OR2M2Q96R28 347 aa17.48■□□□□ 0.39
PCDHB11-202ENST00000624887 NAA11Q9BSU3 229 aaPredicted RBP17.48■□□□□ 0.39
PCDHB11-202ENST00000624887 MED28Q9H204 178 aa17.48■□□□□ 0.39
PCDHB11-202ENST00000624887 NIPAL2Q9H841 368 aa17.48■□□□□ 0.39
PCDHB11-202ENST00000624887 SDK2Q58EX2 2172 aa17.48■□□□□ 0.39
PCDHB11-202ENST00000624887 LOC390937A0A1W2PQ73 354 aa17.48■□□□□ 0.39
PCDHB11-202ENST00000624887 CIB4A0PJX0 185 aa17.48■□□□□ 0.39
PCDHB11-202ENST00000624887 C9orf172C9J069 976 aa17.48■□□□□ 0.39
PCDHB11-202ENST00000624887 LMX1BO60663 402 aa17.48■□□□□ 0.39
PCDHB11-202ENST00000624887 MAB21L1Q13394 359 aa17.48■□□□□ 0.39
PCDHB11-202ENST00000624887 GSG1Q2KHT4 349 aa17.48■□□□□ 0.39
PCDHB11-202ENST00000624887 TMEM255AQ5JRV8 349 aa17.48■□□□□ 0.39
PCDHB11-202ENST00000624887 B3GNTL1Q67FW5 361 aaPredicted RBP17.48■□□□□ 0.39
PCDHB11-202ENST00000624887 BIVMQ86UB2 503 aa17.48■□□□□ 0.39
PCDHB11-202ENST00000624887 CDH24Q86UP0 819 aa17.48■□□□□ 0.39
PCDHB11-202ENST00000624887 TRAF4Q9BUZ4 470 aaPredicted RBP17.48■□□□□ 0.39
PCDHB11-202ENST00000624887 KCNK15Q9H427 330 aa17.48■□□□□ 0.39
PCDHB11-202ENST00000624887 MOB1AQ9H8S9 216 aa17.48■□□□□ 0.39
PCDHB11-202ENST00000624887 GLTPQ9NZD2 209 aa17.48■□□□□ 0.39
PCDHB11-202ENST00000624887 C1QBP02746 253 aa17.47■□□□□ 0.39
PCDHB11-202ENST00000624887 SERPINA7P05543 415 aa17.47■□□□□ 0.39
PCDHB11-202ENST00000624887 PSMA6P60900 246 aaKnown RBP17.47■□□□□ 0.39
PCDHB11-202ENST00000624887 SPOCK1Q08629 439 aa17.47■□□□□ 0.39
PCDHB11-202ENST00000624887 SFRP4Q6FHJ7 346 aaPredicted RBP17.47■□□□□ 0.39
PCDHB11-202ENST00000624887 LYPD6Q86Y78 171 aa17.47■□□□□ 0.39
PCDHB11-202ENST00000624887 NAXDQ8IW45 347 aa17.47■□□□□ 0.39
PCDHB11-202ENST00000624887 NKAIN3Q8N8D7 197 aa17.47■□□□□ 0.39
PCDHB11-202ENST00000624887 ASCC1Q8N9N2 400 aaKnown RBP17.47■□□□□ 0.39
PCDHB11-202ENST00000624887 SUMF1Q8NBK3 374 aa17.47■□□□□ 0.39
PCDHB11-202ENST00000624887 C20orf85Q9H1P6 137 aa17.47■□□□□ 0.39
PCDHB11-202ENST00000624887 OR51J1Q9H342 316 aa17.47■□□□□ 0.39
PCDHB11-202ENST00000624887 P4HTMQ9NXG6 502 aa17.47■□□□□ 0.39
PCDHB11-202ENST00000624887 ASH2LQ9UBL3 628 aa17.47■□□□□ 0.39
PCDHB11-202ENST00000624887 CGGBP1Q9UFW8 167 aaPredicted RBP17.47■□□□□ 0.39
PCDHB11-202ENST00000624887 MRPS18BQ9Y676 258 aaKnown RBP17.47■□□□□ 0.39
PCDHB11-202ENST00000624887 A0A0J9YW62 118 aa17.46■□□□□ 0.39
PCDHB11-202ENST00000624887 DCDC2BA2VCK2 349 aa17.46■□□□□ 0.39
PCDHB11-202ENST00000624887 GJE1A6NN92 205 aa17.46■□□□□ 0.39
PCDHB11-202ENST00000624887 PSMB1P20618 241 aaKnown RBP17.46■□□□□ 0.39
PCDHB11-202ENST00000624887 STOMP27105 288 aa17.46■□□□□ 0.39
PCDHB11-202ENST00000624887 HSD11B1P28845 292 aa17.46■□□□□ 0.39
PCDHB11-202ENST00000624887 ERP29P30040 261 aaKnown RBP17.46■□□□□ 0.39
PCDHB11-202ENST00000624887 SRD5A2P31213 254 aa17.46■□□□□ 0.39
PCDHB11-202ENST00000624887 CLDN6P56747 220 aa17.46■□□□□ 0.39
PCDHB11-202ENST00000624887 CDK10Q15131 360 aa17.46■□□□□ 0.39
PCDHB11-202ENST00000624887 ACER2Q5QJU3 275 aa17.46■□□□□ 0.39
PCDHB11-202ENST00000624887 C1orf100Q5SVJ3 147 aa17.46■□□□□ 0.39
PCDHB11-202ENST00000624887 DEDD2Q8WXF8 326 aa17.46■□□□□ 0.39
PCDHB11-202ENST00000624887 PHF21AQ96BD5 680 aa17.46■□□□□ 0.39
PCDHB11-202ENST00000624887 FGGYQ96C11 551 aa17.46■□□□□ 0.39
PCDHB11-202ENST00000624887 NKX3-1Q99801 234 aaPredicted RBP17.46■□□□□ 0.39
PCDHB11-202ENST00000624887 PNRC2Q9NPJ4 139 aaKnown RBP17.46■□□□□ 0.39
PCDHB11-202ENST00000624887 PAQR5Q9NXK6 330 aaPredicted RBP17.46■□□□□ 0.39
PCDHB11-202ENST00000624887 PCSK5Q92824 1860 aa17.46■□□□□ 0.39
PCDHB11-202ENST00000624887 IGHV3-15A0A0B4J1V0 119 aa17.46■□□□□ 0.39
PCDHB11-202ENST00000624887 A0A0G2JMM0 328 aa17.46■□□□□ 0.39
PCDHB11-202ENST00000624887 A0A1W2PPB8 328 aa17.46■□□□□ 0.39
PCDHB11-202ENST00000624887 A0A1W2PRS3 328 aa17.46■□□□□ 0.39
PCDHB11-202ENST00000624887 KIR3DP1A8MWS1 328 aa17.46■□□□□ 0.39
PCDHB11-202ENST00000624887 PRR33A8MZF0 331 aa17.46■□□□□ 0.39
PCDHB11-202ENST00000624887 H7C417 338 aa17.46■□□□□ 0.39
PCDHB11-202ENST00000624887 SYT7O43581 403 aa17.46■□□□□ 0.39
PCDHB11-202ENST00000624887 CSNK1A1P48729 337 aa17.46■□□□□ 0.39
PCDHB11-202ENST00000624887 GZMKP49863 264 aa17.46■□□□□ 0.39
PCDHB11-202ENST00000624887 ZNF133P52736 654 aaPredicted RBP17.46■□□□□ 0.39
PCDHB11-202ENST00000624887 B3GALT5-AS1P59052 145 aa17.46■□□□□ 0.39
PCDHB11-202ENST00000624887 CAMK2BQ13554 666 aa17.46■□□□□ 0.39
PCDHB11-202ENST00000624887 FCN2Q15485 313 aa17.46■□□□□ 0.39
PCDHB11-202ENST00000624887 CDCP2Q5VXM1 449 aa17.46■□□□□ 0.39
PCDHB11-202ENST00000624887 CD276Q5ZPR3 534 aa17.46■□□□□ 0.39
PCDHB11-202ENST00000624887 TMEM54Q969K7 222 aa17.46■□□□□ 0.39
PCDHB11-202ENST00000624887 FOXRED1Q96CU9 486 aaPredicted RBP17.46■□□□□ 0.39
PCDHB11-202ENST00000624887 UCN2Q96RP3 112 aa17.46■□□□□ 0.39
PCDHB11-202ENST00000624887 EDEM2Q9BV94 578 aa17.46■□□□□ 0.39
PCDHB11-202ENST00000624887 MTFP1Q9UDX5 166 aa17.46■□□□□ 0.39
PCDHB11-202ENST00000624887 NPIPA2E9PIF3 369 aa17.45■□□□□ 0.38
PCDHB11-202ENST00000624887 NPIPA3F8WFD2 350 aa17.45■□□□□ 0.38
PCDHB11-202ENST00000624887 RBBP9O75884 186 aa17.45■□□□□ 0.38
PCDHB11-202ENST00000624887 KDM4BO94953 1096 aa17.45■□□□□ 0.38
PCDHB11-202ENST00000624887 C10orf128Q5T292 105 aa17.45■□□□□ 0.38
PCDHB11-202ENST00000624887 LUZP2Q86TE4 346 aa17.45■□□□□ 0.38
PCDHB11-202ENST00000624887 JAGN1Q8N5M9 183 aa17.45■□□□□ 0.38
PCDHB11-202ENST00000624887 ESX1Q8N693 406 aa17.45■□□□□ 0.38
PCDHB11-202ENST00000624887 OR9K2Q8NGE7 335 aa17.45■□□□□ 0.38
PCDHB11-202ENST00000624887 GIMAP1Q8WWP7 306 aa17.45■□□□□ 0.38
PCDHB11-202ENST00000624887 ZNF385AQ96PM9 386 aaKnown RBP17.45■□□□□ 0.38
PCDHB11-202ENST00000624887 GPR179Q6PRD1 2367 aa17.45■□□□□ 0.38
PCDHB11-202ENST00000624887 TRAV18A0A075B6X5 111 aa17.44■□□□□ 0.38
PCDHB11-202ENST00000624887 TNFSF11O14788 317 aa17.44■□□□□ 0.38
PCDHB11-202ENST00000624887 LDLRAD4O15165 306 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms