RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 SLC18B1Q6NT16 456 aa10.6□□□□□ -0.71
LINC00963-217ENST00000624009 SDR9C7Q8NEX9 313 aa10.6□□□□□ -0.71
LINC00963-217ENST00000624009 DNAJC9Q8WXX5 260 aa10.6□□□□□ -0.71
LINC00963-217ENST00000624009 HAVCR1Q96D42 359 aa10.6□□□□□ -0.71
LINC00963-217ENST00000624009 ELMOD3Q96FG2 381 aa10.6□□□□□ -0.71
LINC00963-217ENST00000624009 RBM4Q9BWF3 364 aaKnown RBP10.6□□□□□ -0.71
LINC00963-217ENST00000624009 C1QTNF5Q9BXJ0 243 aa10.6□□□□□ -0.71
LINC00963-217ENST00000624009 NMNAT2Q9BZQ4 307 aa10.6□□□□□ -0.71
LINC00963-217ENST00000624009 EGLN1Q9GZT9 426 aa10.6□□□□□ -0.71
LINC00963-217ENST00000624009 RERGLQ9H628 205 aa10.6□□□□□ -0.71
LINC00963-217ENST00000624009 SAP30LQ9HAJ7 183 aa10.6□□□□□ -0.71
LINC00963-217ENST00000624009 SRA1Q9HD15 236 aaKnown RBP10.6□□□□□ -0.71
LINC00963-217ENST00000624009 CMC2Q9NRP2 79 aa10.6□□□□□ -0.71
LINC00963-217ENST00000624009 DECR2Q9NUI1 292 aa10.6□□□□□ -0.71
LINC00963-217ENST00000624009 TBC1D23Q9NUY8 699 aa10.6□□□□□ -0.71
LINC00963-217ENST00000624009 VNN3Q9NY84 501 aa10.6□□□□□ -0.71
LINC00963-217ENST00000624009 KCNS2Q9ULS6 477 aa10.6□□□□□ -0.71
LINC00963-217ENST00000624009 POMPQ9Y244 141 aa10.6□□□□□ -0.71
LINC00963-217ENST00000624009 U3KQV3 271 aa10.6□□□□□ -0.71
LINC00963-217ENST00000624009 IGHV1-69-2A0A0G2JMI3 117 aa10.59□□□□□ -0.71
LINC00963-217ENST00000624009 LMX1BO60663 402 aa10.59□□□□□ -0.71
LINC00963-217ENST00000624009 IGHV1-46P01743 117 aa10.59□□□□□ -0.71
LINC00963-217ENST00000624009 ANXA8P13928 327 aa10.59□□□□□ -0.71
LINC00963-217ENST00000624009 PCMT1P22061 227 aa10.59□□□□□ -0.71
LINC00963-217ENST00000624009 COL8A2P25067 703 aa10.59□□□□□ -0.71
LINC00963-217ENST00000624009 MAGEB1P43366 347 aa10.59□□□□□ -0.71
LINC00963-217ENST00000624009 CCL8P80075 99 aa10.59□□□□□ -0.71
LINC00963-217ENST00000624009 PSG7Q13046 419 aa10.59□□□□□ -0.71
LINC00963-217ENST00000624009 CDK5R2Q13319 367 aa10.59□□□□□ -0.71
LINC00963-217ENST00000624009 TEX30Q5JUR7 227 aa10.59□□□□□ -0.71
LINC00963-217ENST00000624009 SPATA46Q5T0L3 261 aa10.59□□□□□ -0.71
LINC00963-217ENST00000624009 RHOUQ7L0Q8 258 aa10.59□□□□□ -0.71
LINC00963-217ENST00000624009 OR8D4Q8NGM9 314 aa10.59□□□□□ -0.71
LINC00963-217ENST00000624009 OR2AJ1Q8NGZ0 328 aa10.59□□□□□ -0.71
LINC00963-217ENST00000624009 TEX47Q8TBZ9 253 aa10.59□□□□□ -0.71
LINC00963-217ENST00000624009 MSI2Q96DH6 328 aaKnown RBP10.59□□□□□ -0.71
LINC00963-217ENST00000624009 FEVQ99581 238 aa10.59□□□□□ -0.71
LINC00963-217ENST00000624009 CDADC1Q9BWV3 514 aa10.59□□□□□ -0.71
LINC00963-217ENST00000624009 TSSK6Q9BXA6 273 aa10.59□□□□□ -0.71
LINC00963-217ENST00000624009 ZNF275Q9NSD4 429 aaPredicted RBP10.59□□□□□ -0.71
LINC00963-217ENST00000624009 DDX28Q9NUL7 540 aaKnown RBP10.59□□□□□ -0.71
LINC00963-217ENST00000624009 MRPL22Q9NWU5 206 aaKnown RBP10.59□□□□□ -0.71
LINC00963-217ENST00000624009 DNAJB9Q9UBS3 223 aa10.59□□□□□ -0.71
LINC00963-217ENST00000624009 PURGQ9UJV8 347 aaKnown RBP10.59□□□□□ -0.71
LINC00963-217ENST00000624009 GRIP1Q9Y3R0 1128 aa10.59□□□□□ -0.71
LINC00963-217ENST00000624009 FBN1P35555 2871 aaKnown RBP10.59□□□□□ -0.71
LINC00963-217ENST00000624009 LOC100289279A0A1B0GTE1 492 aa10.58□□□□□ -0.72
LINC00963-217ENST00000624009 RIIAD1A6NNX1 92 aa10.58□□□□□ -0.72
LINC00963-217ENST00000624009 IFNL4K9M1U5 179 aa10.58□□□□□ -0.72
LINC00963-217ENST00000624009 GNGT2O14610 69 aa10.58□□□□□ -0.72
LINC00963-217ENST00000624009 SURF4O15260 269 aa10.58□□□□□ -0.72
LINC00963-217ENST00000624009 GSC2O15499 205 aa10.58□□□□□ -0.72
LINC00963-217ENST00000624009 TIMM8AO60220 97 aaPredicted RBP10.58□□□□□ -0.72
LINC00963-217ENST00000624009 IFNA2P01563 188 aa10.58□□□□□ -0.72
LINC00963-217ENST00000624009 FAM157CP0CG43 387 aa10.58□□□□□ -0.72
LINC00963-217ENST00000624009 ZNF823P16415 610 aa10.58□□□□□ -0.72
LINC00963-217ENST00000624009 ZNF16P17020 682 aaPredicted RBP10.58□□□□□ -0.72
LINC00963-217ENST00000624009 ZNF3P17036 446 aa10.58□□□□□ -0.72
LINC00963-217ENST00000624009 TNFSF4P23510 183 aa10.58□□□□□ -0.72
LINC00963-217ENST00000624009 OTX1P32242 354 aaPredicted RBP10.58□□□□□ -0.72
LINC00963-217ENST00000624009 GRK5P34947 590 aa10.58□□□□□ -0.72
LINC00963-217ENST00000624009 CDH15P55291 814 aa10.58□□□□□ -0.72
LINC00963-217ENST00000624009 HFEQ30201 348 aa10.58□□□□□ -0.72
LINC00963-217ENST00000624009 TMEM255AQ5JRV8 349 aa10.58□□□□□ -0.72
LINC00963-217ENST00000624009 SLC35F1Q5T1Q4 408 aa10.58□□□□□ -0.72
LINC00963-217ENST00000624009 LINC01356Q8N9X3 169 aa10.58□□□□□ -0.72
LINC00963-217ENST00000624009 SLC37A3Q8NCC5 494 aa10.58□□□□□ -0.72
LINC00963-217ENST00000624009 PROKR2Q8NFJ6 384 aa10.58□□□□□ -0.72
LINC00963-217ENST00000624009 YIPF5Q969M3 257 aa10.58□□□□□ -0.72
LINC00963-217ENST00000624009 TIMD4Q96H15 378 aa10.58□□□□□ -0.72
LINC00963-217ENST00000624009 ATF6BQ99941 703 aa10.58□□□□□ -0.72
LINC00963-217ENST00000624009 CADM1Q9BY67 442 aaKnown RBP10.58□□□□□ -0.72
LINC00963-217ENST00000624009 PNRC2Q9NPJ4 139 aaKnown RBP10.58□□□□□ -0.72
LINC00963-217ENST00000624009 STARD10Q9Y365 291 aa10.58□□□□□ -0.72
LINC00963-217ENST00000624009 ARHGAP32A7KAX9 2087 aa10.57□□□□□ -0.72
LINC00963-217ENST00000624009 CUBNO60494 3623 aa10.57□□□□□ -0.72
LINC00963-217ENST00000624009 A0A1B0GWJ7 208 aa10.57□□□□□ -0.72
LINC00963-217ENST00000624009 ZSCAN5BA6NJL1 495 aa10.57□□□□□ -0.72
LINC00963-217ENST00000624009 B4DSR2 109 aa10.57□□□□□ -0.72
LINC00963-217ENST00000624009 CLDN25C9JDP6 229 aa10.57□□□□□ -0.72
LINC00963-217ENST00000624009 LYNX1G3V0Z9 82 aa10.57□□□□□ -0.72
LINC00963-217ENST00000624009 FKBP6O75344 327 aa10.57□□□□□ -0.72
LINC00963-217ENST00000624009 DEAF1O75398 565 aaPredicted RBP10.57□□□□□ -0.72
LINC00963-217ENST00000624009 HLA-DQA2P01906 255 aa10.57□□□□□ -0.72
LINC00963-217ENST00000624009 ACSM4P0C7M7 580 aa10.57□□□□□ -0.72
LINC00963-217ENST00000624009 LYNX1P0DP58 116 aa10.57□□□□□ -0.72
LINC00963-217ENST00000624009 SELEP16581 610 aa10.57□□□□□ -0.72
LINC00963-217ENST00000624009 TNFRSF1AP19438 455 aa10.57□□□□□ -0.72
LINC00963-217ENST00000624009 FMO3P31513 532 aa10.57□□□□□ -0.72
LINC00963-217ENST00000624009 DVL1P1P54792 670 aaPredicted RBP10.57□□□□□ -0.72
LINC00963-217ENST00000624009 PPP1R8Q12972 351 aaKnown RBP10.57□□□□□ -0.72
LINC00963-217ENST00000624009 MEP1BQ16820 701 aa10.57□□□□□ -0.72
LINC00963-217ENST00000624009 RSPO1Q2MKA7 263 aaPredicted RBP10.57□□□□□ -0.72
LINC00963-217ENST00000624009 ALKBH6Q3KRA9 238 aa10.57□□□□□ -0.72
LINC00963-217ENST00000624009 SLC27A4Q6P1M0 643 aa10.57□□□□□ -0.72
LINC00963-217ENST00000624009 USP51Q70EK9 711 aa10.57□□□□□ -0.72
LINC00963-217ENST00000624009 SPATA24Q86W54 205 aa10.57□□□□□ -0.72
LINC00963-217ENST00000624009 PRIMA1Q86XR5 153 aa10.57□□□□□ -0.72
LINC00963-217ENST00000624009 CMBLQ96DG6 245 aa10.57□□□□□ -0.72
LINC00963-217ENST00000624009 PITX2Q99697 317 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms