RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-231	ENST00000622045	ZNF542P	Q5EBM4	170 aa		12.93	□□□□□ -0.34
SYNRG-231	ENST00000622045	NPSR1	Q6W5P4	371 aa		12.93	□□□□□ -0.34
SYNRG-231	ENST00000622045	PPP1R3B	Q86XI6	285 aa		12.93	□□□□□ -0.34
SYNRG-231	ENST00000622045	METTL27	Q8N6F8	245 aa	Predicted RBP	12.93	□□□□□ -0.34
SYNRG-231	ENST00000622045	BCORP1	Q8N888	145 aa		12.93	□□□□□ -0.34
SYNRG-231	ENST00000622045	EDA	Q92838	391 aa		12.93	□□□□□ -0.34
SYNRG-231	ENST00000622045	FAM46B	Q96A09	425 aa		12.93	□□□□□ -0.34
SYNRG-231	ENST00000622045	VSTM2L	Q96N03	204 aa		12.93	□□□□□ -0.34
SYNRG-231	ENST00000622045	DCBLD2	Q96PD2	775 aa		12.93	□□□□□ -0.34
SYNRG-231	ENST00000622045	LPAR4	Q99677	370 aa		12.93	□□□□□ -0.34
SYNRG-231	ENST00000622045		H0YIZ8	118 aa		12.93	□□□□□ -0.34
SYNRG-231	ENST00000622045	CLDN4	O14493	209 aa		12.93	□□□□□ -0.34
SYNRG-231	ENST00000622045	PLRG1	O43660	514 aa	Known RBP	12.93	□□□□□ -0.34
SYNRG-231	ENST00000622045	CRH	P06850	196 aa		12.93	□□□□□ -0.34
SYNRG-231	ENST00000622045	HEXA	P06865	529 aa		12.93	□□□□□ -0.34
SYNRG-231	ENST00000622045	SPARC	P09486	303 aa		12.93	□□□□□ -0.34
SYNRG-231	ENST00000622045	RCC1	P18754	421 aa	Predicted RBP	12.93	□□□□□ -0.34
SYNRG-231	ENST00000622045	ALOX5AP	P20292	161 aa		12.93	□□□□□ -0.34
SYNRG-231	ENST00000622045	SLC25A1	P53007	311 aa		12.93	□□□□□ -0.34
SYNRG-231	ENST00000622045	PPP1CA	P62136	330 aa		12.93	□□□□□ -0.34
SYNRG-231	ENST00000622045	RPL18	Q07020	188 aa	Known RBP	12.93	□□□□□ -0.34
SYNRG-231	ENST00000622045	TMEM31	Q5JXX7	168 aa		12.93	□□□□□ -0.34
SYNRG-231	ENST00000622045	WBP2NL	Q6ICG8	309 aa		12.93	□□□□□ -0.34
SYNRG-231	ENST00000622045	SFTPA2	Q8IWL1	248 aa		12.93	□□□□□ -0.34
SYNRG-231	ENST00000622045	PAQR4	Q8N4S7	273 aa	Predicted RBP	12.93	□□□□□ -0.34
SYNRG-231	ENST00000622045	C16orf52	Q8NHV5	167 aa		12.93	□□□□□ -0.34
SYNRG-231	ENST00000622045	NUDCD2	Q8WVJ2	157 aa		12.93	□□□□□ -0.34
SYNRG-231	ENST00000622045	IP6K3	Q96PC2	410 aa		12.93	□□□□□ -0.34
SYNRG-231	ENST00000622045	CYTL1	Q9NRR1	136 aa		12.93	□□□□□ -0.34
SYNRG-231	ENST00000622045	LPAR3	Q9UBY5	353 aa		12.93	□□□□□ -0.34
SYNRG-231	ENST00000622045	DHDH	Q9UQ10	334 aa		12.93	□□□□□ -0.34
SYNRG-231	ENST00000622045	MPDZ	O75970	2070 aa		12.93	□□□□□ -0.34
SYNRG-231	ENST00000622045	TRBV5-7	A0A0A0MS05	114 aa		12.93	□□□□□ -0.34
SYNRG-231	ENST00000622045	METTL21EP	A6NDL7	271 aa		12.93	□□□□□ -0.34
SYNRG-231	ENST00000622045	HCRTR1	O43613	425 aa		12.93	□□□□□ -0.34
SYNRG-231	ENST00000622045	ADAP1	O75689	374 aa		12.93	□□□□□ -0.34
SYNRG-231	ENST00000622045	ARG1	P05089	322 aa		12.93	□□□□□ -0.34
SYNRG-231	ENST00000622045	PNMT	P11086	282 aa		12.93	□□□□□ -0.34
SYNRG-231	ENST00000622045	PI3	P19957	117 aa		12.93	□□□□□ -0.34
SYNRG-231	ENST00000622045	BTG2	P78543	158 aa		12.93	□□□□□ -0.34
SYNRG-231	ENST00000622045	NFATC4	Q14934	902 aa		12.93	□□□□□ -0.34
SYNRG-231	ENST00000622045	SLC9A3R2	Q15599	337 aa		12.93	□□□□□ -0.34
SYNRG-231	ENST00000622045	DHRS11	Q6UWP2	260 aa		12.93	□□□□□ -0.34
SYNRG-231	ENST00000622045	OR51A2	Q8NGJ7	313 aa		12.93	□□□□□ -0.34
SYNRG-231	ENST00000622045	LMF2	Q9BU23	707 aa	Known RBP	12.93	□□□□□ -0.34
SYNRG-231	ENST00000622045	PRTFDC1	Q9NRG1	225 aa		12.93	□□□□□ -0.34
SYNRG-231	ENST00000622045	SLC17A2	O00624	439 aa		12.92	□□□□□ -0.34
SYNRG-231	ENST00000622045	CTSB	P07858	339 aa		12.92	□□□□□ -0.34
SYNRG-231	ENST00000622045	NME1	P15531	152 aa	Known RBP	12.92	□□□□□ -0.34
SYNRG-231	ENST00000622045	PMPCA	Q10713	525 aa		12.92	□□□□□ -0.34
SYNRG-231	ENST00000622045	EBP	Q15125	230 aa	Known RBP	12.92	□□□□□ -0.34
SYNRG-231	ENST00000622045	ISX	Q2M1V0	245 aa		12.92	□□□□□ -0.34
SYNRG-231	ENST00000622045	CBLN3	Q6UW01	205 aa		12.92	□□□□□ -0.34
SYNRG-231	ENST00000622045	CDC20B	Q86Y33	519 aa		12.92	□□□□□ -0.34
SYNRG-231	ENST00000622045	FAM174A	Q8TBP5	190 aa		12.92	□□□□□ -0.34
SYNRG-231	ENST00000622045	RPS4Y2	Q8TD47	263 aa		12.92	□□□□□ -0.34
SYNRG-231	ENST00000622045	SLC41A2	Q96JW4	573 aa		12.92	□□□□□ -0.34
SYNRG-231	ENST00000622045	CERS4	Q9HA82	394 aa		12.92	□□□□□ -0.34
SYNRG-231	ENST00000622045	TAS2R4	Q9NYW5	299 aa		12.92	□□□□□ -0.34
SYNRG-231	ENST00000622045	STK17B	O94768	372 aa		12.92	□□□□□ -0.34
SYNRG-231	ENST00000622045	ABHD16A	O95870	558 aa		12.92	□□□□□ -0.34
SYNRG-231	ENST00000622045	S1PR1	P21453	382 aa		12.92	□□□□□ -0.34
SYNRG-231	ENST00000622045	ZNF595	Q8IYB9	648 aa		12.92	□□□□□ -0.34
SYNRG-231	ENST00000622045	FAM24B	Q8N5W8	94 aa		12.92	□□□□□ -0.34
SYNRG-231	ENST00000622045	SLC30A7	Q8NEW0	376 aa		12.92	□□□□□ -0.34
SYNRG-231	ENST00000622045	TCTEX1D2	Q8WW35	142 aa		12.92	□□□□□ -0.34
SYNRG-231	ENST00000622045	RHOV	Q96L33	236 aa		12.92	□□□□□ -0.34
SYNRG-231	ENST00000622045	RNF126	Q9BV68	326 aa		12.92	□□□□□ -0.34
SYNRG-231	ENST00000622045	SEC61A2	Q9H9S3	476 aa		12.92	□□□□□ -0.34
SYNRG-231	ENST00000622045	SEBOX	Q9HB31	216 aa	Predicted RBP	12.92	□□□□□ -0.34
SYNRG-231	ENST00000622045	TMEM100	Q9NV29	134 aa		12.92	□□□□□ -0.34
SYNRG-231	ENST00000622045	GSKIP	Q9P0R6	139 aa		12.92	□□□□□ -0.34
SYNRG-231	ENST00000622045	HIF3A	Q9Y2N7	669 aa		12.92	□□□□□ -0.34
SYNRG-231	ENST00000622045	IGKV1D-42	A0A075B6H8	117 aa		12.92	□□□□□ -0.34
SYNRG-231	ENST00000622045		A0A0J9YY10	115 aa		12.92	□□□□□ -0.34
SYNRG-231	ENST00000622045	SCD	O00767	359 aa		12.92	□□□□□ -0.34
SYNRG-231	ENST00000622045	OR8U8	P0C7N1	319 aa		12.92	□□□□□ -0.34
SYNRG-231	ENST00000622045	RNH1	P13489	461 aa	Known RBP	12.92	□□□□□ -0.34
SYNRG-231	ENST00000622045	ZNF561	Q8N587	486 aa		12.92	□□□□□ -0.34
SYNRG-231	ENST00000622045	KTI12	Q96EK9	354 aa	Predicted RBP	12.92	□□□□□ -0.34
SYNRG-231	ENST00000622045	C4orf45	Q96LM5	186 aa		12.92	□□□□□ -0.34
SYNRG-231	ENST00000622045	FN3KRP	Q9HA64	309 aa		12.92	□□□□□ -0.34
SYNRG-231	ENST00000622045	MMP25	Q9NPA2	562 aa		12.92	□□□□□ -0.34
SYNRG-231	ENST00000622045	OR5AC2	Q9NZP5	309 aa		12.92	□□□□□ -0.34
SYNRG-231	ENST00000622045	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	12.91	□□□□□ -0.34
SYNRG-231	ENST00000622045	SOX1	O00570	391 aa	Predicted RBP	12.91	□□□□□ -0.34
SYNRG-231	ENST00000622045	CT45A8	P0DMV1	189 aa		12.91	□□□□□ -0.34
SYNRG-231	ENST00000622045	CT45A9	P0DMV2	189 aa		12.91	□□□□□ -0.34
SYNRG-231	ENST00000622045	MAOA	P21397	527 aa		12.91	□□□□□ -0.34
SYNRG-231	ENST00000622045	CAV2	P51636	162 aa		12.91	□□□□□ -0.34
SYNRG-231	ENST00000622045	RPS4X	P62701	263 aa	Known RBP	12.91	□□□□□ -0.34
SYNRG-231	ENST00000622045	SKP2	Q13309	424 aa		12.91	□□□□□ -0.34
SYNRG-231	ENST00000622045	CT45A2	Q5DJT8	189 aa		12.91	□□□□□ -0.34
SYNRG-231	ENST00000622045	CDPF1	Q6NVV7	123 aa		12.91	□□□□□ -0.34
SYNRG-231	ENST00000622045	TRAPPC6B	Q86SZ2	158 aa		12.91	□□□□□ -0.34
SYNRG-231	ENST00000622045	RTN4RL2	Q86UN3	420 aa		12.91	□□□□□ -0.34
SYNRG-231	ENST00000622045	SLC25A42	Q86VD7	318 aa		12.91	□□□□□ -0.34
SYNRG-231	ENST00000622045	LILRB2	Q8N423	598 aa		12.91	□□□□□ -0.34
SYNRG-231	ENST00000622045	METTL21A	Q8WXB1	218 aa		12.91	□□□□□ -0.34
SYNRG-231	ENST00000622045	OR10A5	Q9H207	317 aa		12.91	□□□□□ -0.34

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