RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 FOXRED1Q96CU9 486 aaPredicted RBP17.53■□□□□ 0.4
PDLIM3-212ENST00000620787 FAHD2AQ96GK7 314 aa17.53■□□□□ 0.4
PDLIM3-212ENST00000620787 G6PC2Q9NQR9 355 aa17.53■□□□□ 0.4
PDLIM3-212ENST00000620787 ZNF629Q9UEG4 869 aaPredicted RBP17.53■□□□□ 0.4
PDLIM3-212ENST00000620787 MKL2Q9ULH7 1088 aa17.53■□□□□ 0.4
PDLIM3-212ENST00000620787 CARHSP1Q9Y2V2 147 aaKnown RBP17.53■□□□□ 0.4
PDLIM3-212ENST00000620787 TMEM184BQ9Y519 407 aaPredicted RBP17.53■□□□□ 0.4
PDLIM3-212ENST00000620787 R4GMQ9 66 aa17.53■□□□□ 0.4
PDLIM3-212ENST00000620787 ICOSLGO75144 302 aa17.53■□□□□ 0.4
PDLIM3-212ENST00000620787 CRHP06850 196 aa17.53■□□□□ 0.4
PDLIM3-212ENST00000620787 SLC6A8P48029 635 aa17.53■□□□□ 0.4
PDLIM3-212ENST00000620787 VEGFBP49765 207 aa17.53■□□□□ 0.4
PDLIM3-212ENST00000620787 AKR1D1P51857 326 aa17.53■□□□□ 0.4
PDLIM3-212ENST00000620787 DCDP81605 110 aaKnown RBP17.53■□□□□ 0.4
PDLIM3-212ENST00000620787 OR7A5Q15622 319 aa17.53■□□□□ 0.4
PDLIM3-212ENST00000620787 TMEM71Q6P5X7 295 aa17.53■□□□□ 0.4
PDLIM3-212ENST00000620787 KCTD9Q7L273 389 aa17.53■□□□□ 0.4
PDLIM3-212ENST00000620787 MARCH3Q86UD3 253 aa17.53■□□□□ 0.4
PDLIM3-212ENST00000620787 PRR22Q8IZ63 422 aa17.53■□□□□ 0.4
PDLIM3-212ENST00000620787 PAQR8Q8TEZ7 354 aa17.53■□□□□ 0.4
PDLIM3-212ENST00000620787 BADQ92934 168 aa17.53■□□□□ 0.4
PDLIM3-212ENST00000620787 ADOQ96SZ5 270 aa17.53■□□□□ 0.4
PDLIM3-212ENST00000620787 TDRD6O60522 2096 aaKnown RBP17.53■□□□□ 0.4
PDLIM3-212ENST00000620787 EFSO43281 561 aa17.52■□□□□ 0.4
PDLIM3-212ENST00000620787 MPZL1O95297 269 aa17.52■□□□□ 0.4
PDLIM3-212ENST00000620787 PVALBP20472 110 aaPredicted RBP17.52■□□□□ 0.4
PDLIM3-212ENST00000620787 YPEL5P62699 121 aa17.52■□□□□ 0.4
PDLIM3-212ENST00000620787 MICBQ29980 383 aa17.52■□□□□ 0.4
PDLIM3-212ENST00000620787 PLEKHN1Q494U1 663 aaPredicted RBP17.52■□□□□ 0.4
PDLIM3-212ENST00000620787 ZNF542PQ5EBM4 170 aa17.52■□□□□ 0.4
PDLIM3-212ENST00000620787 SLC22A18ASQ8N1D0 253 aa17.52■□□□□ 0.4
PDLIM3-212ENST00000620787 SLC30A7Q8NEW0 376 aa17.52■□□□□ 0.4
PDLIM3-212ENST00000620787 OR4K17Q8NGC6 315 aa17.52■□□□□ 0.4
PDLIM3-212ENST00000620787 NUDCD2Q8WVJ2 157 aa17.52■□□□□ 0.4
PDLIM3-212ENST00000620787 HERVK_113Q902F9 699 aa17.52■□□□□ 0.4
PDLIM3-212ENST00000620787 TXNIPQ9H3M7 391 aa17.52■□□□□ 0.4
PDLIM3-212ENST00000620787 ESRP2Q9H6T0 727 aaKnown RBP17.52■□□□□ 0.4
PDLIM3-212ENST00000620787 FN3KRPQ9HA64 309 aa17.52■□□□□ 0.4
PDLIM3-212ENST00000620787 CSAG2Q9Y5P2 127 aa17.52■□□□□ 0.4
PDLIM3-212ENST00000620787 ARID1BQ8NFD5 2236 aaPredicted RBP17.52■□□□□ 0.4
PDLIM3-212ENST00000620787 TEX13DA0A0J9YY54 714 aaPredicted RBP17.52■□□□□ 0.39
PDLIM3-212ENST00000620787 DBX1A6NMT0 343 aa17.52■□□□□ 0.39
PDLIM3-212ENST00000620787 EIF1AYO14602 144 aaKnown RBP17.52■□□□□ 0.39
PDLIM3-212ENST00000620787 HCRTR2O43614 444 aa17.52■□□□□ 0.39
PDLIM3-212ENST00000620787 TNFP01375 233 aa17.52■□□□□ 0.39
PDLIM3-212ENST00000620787 ERCC1P07992 297 aaPredicted RBP17.52■□□□□ 0.39
PDLIM3-212ENST00000620787 VAMP1P23763 118 aa17.52■□□□□ 0.39
PDLIM3-212ENST00000620787 PSMB6P28072 239 aa17.52■□□□□ 0.39
PDLIM3-212ENST00000620787 GALNSP34059 522 aa17.52■□□□□ 0.39
PDLIM3-212ENST00000620787 RORAP35398 523 aa17.52■□□□□ 0.39
PDLIM3-212ENST00000620787 EIF1AXP47813 144 aaKnown RBP17.52■□□□□ 0.39
PDLIM3-212ENST00000620787 OR13H1Q8NG92 308 aa17.52■□□□□ 0.39
PDLIM3-212ENST00000620787 PTPMT1Q8WUK0 201 aaPredicted RBP17.52■□□□□ 0.39
PDLIM3-212ENST00000620787 MMABQ96EY8 250 aaPredicted RBP17.52■□□□□ 0.39
PDLIM3-212ENST00000620787 ZC3H10Q96K80 434 aaKnown RBP17.52■□□□□ 0.39
PDLIM3-212ENST00000620787 CHMP1AQ9HD42 196 aaPredicted RBP17.52■□□□□ 0.39
PDLIM3-212ENST00000620787 WBP1LQ9NX94 342 aa17.52■□□□□ 0.39
PDLIM3-212ENST00000620787 RAB22AQ9UL26 194 aa17.52■□□□□ 0.39
PDLIM3-212ENST00000620787 F5P12259 2224 aa17.51■□□□□ 0.39
PDLIM3-212ENST00000620787 DUS4LO95620 317 aaKnown RBP17.51■□□□□ 0.39
PDLIM3-212ENST00000620787 ISG15P05161 165 aa17.51■□□□□ 0.39
PDLIM3-212ENST00000620787 ATXN8OSP0DMR3 200 aa17.51■□□□□ 0.39
PDLIM3-212ENST00000620787 TPT1P13693 172 aaKnown RBP17.51■□□□□ 0.39
PDLIM3-212ENST00000620787 HRH1P35367 487 aa17.51■□□□□ 0.39
PDLIM3-212ENST00000620787 RAB13P51153 203 aa17.51■□□□□ 0.39
PDLIM3-212ENST00000620787 PNLIPRP2P54317 469 aa17.51■□□□□ 0.39
PDLIM3-212ENST00000620787 HHEXQ03014 270 aa17.51■□□□□ 0.39
PDLIM3-212ENST00000620787 ZNF528Q3MIS6 628 aa17.51■□□□□ 0.39
PDLIM3-212ENST00000620787 FRMD1Q8N878 549 aa17.51■□□□□ 0.39
PDLIM3-212ENST00000620787 NKAIN3Q8N8D7 197 aa17.51■□□□□ 0.39
PDLIM3-212ENST00000620787 OR4A4PQ8NGN8 299 aa17.51■□□□□ 0.39
PDLIM3-212ENST00000620787 ARL11Q969Q4 196 aa17.51■□□□□ 0.39
PDLIM3-212ENST00000620787 SELENOIQ9C0D9 397 aa17.51■□□□□ 0.39
PDLIM3-212ENST00000620787 ZNF768Q9H5H4 540 aaKnown RBP17.51■□□□□ 0.39
PDLIM3-212ENST00000620787 TRBV6-7A0A0A0MS04 114 aa17.51■□□□□ 0.39
PDLIM3-212ENST00000620787 LOC101059948A0A1B0GTJ6 334 aa17.51■□□□□ 0.39
PDLIM3-212ENST00000620787 METTL21EPA6NDL7 271 aa17.51■□□□□ 0.39
PDLIM3-212ENST00000620787 F8W036 122 aa17.51■□□□□ 0.39
PDLIM3-212ENST00000620787 AKR1C4P17516 323 aa17.51■□□□□ 0.39
PDLIM3-212ENST00000620787 BLOC1S1P78537 153 aa17.51■□□□□ 0.39
PDLIM3-212ENST00000620787 UNC119Q13432 240 aa17.51■□□□□ 0.39
PDLIM3-212ENST00000620787 DCUN1D4Q92564 292 aa17.51■□□□□ 0.39
PDLIM3-212ENST00000620787 C12orf57Q99622 126 aa17.51■□□□□ 0.39
PDLIM3-212ENST00000620787 TLNRD1Q9H1K6 362 aa17.51■□□□□ 0.39
PDLIM3-212ENST00000620787 CNTD2Q9H8S5 307 aa17.51■□□□□ 0.39
PDLIM3-212ENST00000620787 CYTL1Q9NRR1 136 aa17.51■□□□□ 0.39
PDLIM3-212ENST00000620787 COA4Q9NYJ1 87 aa17.51■□□□□ 0.39
PDLIM3-212ENST00000620787 OR52A1Q9UKL2 312 aa17.51■□□□□ 0.39
PDLIM3-212ENST00000620787 OR5K4A6NMS3 321 aa17.5■□□□□ 0.39
PDLIM3-212ENST00000620787 MT-ATP6P00846 226 aa17.5■□□□□ 0.39
PDLIM3-212ENST00000620787 SERPINF1P36955 418 aa17.5■□□□□ 0.39
PDLIM3-212ENST00000620787 RFC3P40938 356 aa17.5■□□□□ 0.39
PDLIM3-212ENST00000620787 H3F3CQ6NXT2 135 aa17.5■□□□□ 0.39
PDLIM3-212ENST00000620787 MRGPRX1Q96LB2 322 aa17.5■□□□□ 0.39
PDLIM3-212ENST00000620787 COA3Q9Y2R0 106 aaPredicted RBP17.5■□□□□ 0.39
PDLIM3-212ENST00000620787 C5orf51A6NDU8 294 aa17.5■□□□□ 0.39
PDLIM3-212ENST00000620787 DXOO77932 396 aaKnown RBP17.5■□□□□ 0.39
PDLIM3-212ENST00000620787 F12P00748 615 aaPredicted RBP17.5■□□□□ 0.39
PDLIM3-212ENST00000620787 AKT2P31751 481 aa17.5■□□□□ 0.39
PDLIM3-212ENST00000620787 CBX5P45973 191 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms