RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 ERVS71-1P61550 626 aa11.79□□□□□ -0.52
NEK3-210ENST00000620675 GALK2Q01415 458 aa11.79□□□□□ -0.52
NEK3-210ENST00000620675 PLP2Q04941 152 aa11.79□□□□□ -0.52
NEK3-210ENST00000620675 KRT80Q6KB66 452 aa11.79□□□□□ -0.52
NEK3-210ENST00000620675 DPPA2Q7Z7J5 298 aa11.79□□□□□ -0.52
NEK3-210ENST00000620675 BPIFB6Q8NFQ5 453 aa11.79□□□□□ -0.52
NEK3-210ENST00000620675 RNF133Q8WVZ7 376 aa11.79□□□□□ -0.52
NEK3-210ENST00000620675 NRGNQ92686 78 aa11.79□□□□□ -0.52
NEK3-210ENST00000620675 TMEM204Q9BSN7 226 aa11.79□□□□□ -0.52
NEK3-210ENST00000620675 YIPF3Q9GZM5 350 aa11.79□□□□□ -0.52
NEK3-210ENST00000620675 NGBQ9NPG2 151 aa11.79□□□□□ -0.52
NEK3-210ENST00000620675 LAMP5Q9UJQ1 280 aa11.79□□□□□ -0.52
NEK3-210ENST00000620675 F5H5K5 113 aa11.78□□□□□ -0.52
NEK3-210ENST00000620675 GPRIN2O60269 458 aa11.78□□□□□ -0.52
NEK3-210ENST00000620675 CD3EP07766 207 aa11.78□□□□□ -0.52
NEK3-210ENST00000620675 SLC2A1P11166 492 aa11.78□□□□□ -0.52
NEK3-210ENST00000620675 ATP6V1E1P36543 226 aa11.78□□□□□ -0.52
NEK3-210ENST00000620675 PRKXP51817 358 aa11.78□□□□□ -0.52
NEK3-210ENST00000620675 ZNF85Q03923 595 aa11.78□□□□□ -0.52
NEK3-210ENST00000620675 TLE4Q04727 773 aa11.78□□□□□ -0.52
NEK3-210ENST00000620675 SLC22A25Q6T423 547 aa11.78□□□□□ -0.52
NEK3-210ENST00000620675 ALDH16A1Q8IZ83 802 aa11.78□□□□□ -0.52
NEK3-210ENST00000620675 OR52I1Q8NGK6 324 aa11.78□□□□□ -0.52
NEK3-210ENST00000620675 GGHQ92820 318 aa11.78□□□□□ -0.52
NEK3-210ENST00000620675 Q96MT0 163 aa11.78□□□□□ -0.52
NEK3-210ENST00000620675 ATF6BQ99941 703 aa11.78□□□□□ -0.52
NEK3-210ENST00000620675 ZNF649Q9BS31 505 aa11.78□□□□□ -0.52
NEK3-210ENST00000620675 POFUT1Q9H488 388 aa11.78□□□□□ -0.52
NEK3-210ENST00000620675 PAK1IP1Q9NWT1 392 aaPredicted RBP11.78□□□□□ -0.52
NEK3-210ENST00000620675 EXOGQ9Y2C4 368 aaKnown RBP11.78□□□□□ -0.52
NEK3-210ENST00000620675 RNF115Q9Y4L5 304 aa11.78□□□□□ -0.52
NEK3-210ENST00000620675 TMCC2O75069 709 aa11.77□□□□□ -0.52
NEK3-210ENST00000620675 APLNRP35414 380 aa11.77□□□□□ -0.52
NEK3-210ENST00000620675 OPRL1P41146 370 aa11.77□□□□□ -0.52
NEK3-210ENST00000620675 PRSS12P56730 875 aa11.77□□□□□ -0.52
NEK3-210ENST00000620675 KRTAP27-1Q3LI81 207 aa11.77□□□□□ -0.52
NEK3-210ENST00000620675 C3orf36Q3SXR2 165 aa11.77□□□□□ -0.52
NEK3-210ENST00000620675 C6orf141Q5SZD1 244 aa11.77□□□□□ -0.52
NEK3-210ENST00000620675 ZNF704Q6ZNC4 412 aaPredicted RBP11.77□□□□□ -0.52
NEK3-210ENST00000620675 RFPL4BQ6ZWI9 263 aa11.77□□□□□ -0.52
NEK3-210ENST00000620675 HDHD2Q9H0R4 259 aa11.77□□□□□ -0.52
NEK3-210ENST00000620675 DDX28Q9NUL7 540 aaKnown RBP11.77□□□□□ -0.52
NEK3-210ENST00000620675 GRIP1Q9Y3R0 1128 aa11.77□□□□□ -0.52
NEK3-210ENST00000620675 E7EQL1 145 aa11.77□□□□□ -0.53
NEK3-210ENST00000620675 SLC1A7O00341 560 aa11.77□□□□□ -0.53
NEK3-210ENST00000620675 CRYAAP02489 173 aa11.77□□□□□ -0.53
NEK3-210ENST00000620675 GDI2P50395 445 aaKnown RBP11.77□□□□□ -0.53
NEK3-210ENST00000620675 TBC1D28Q2M2D7 210 aa11.77□□□□□ -0.53
NEK3-210ENST00000620675 VHLLQ6RSH7 139 aa11.77□□□□□ -0.53
NEK3-210ENST00000620675 LHFPL3Q86UP9 236 aa11.77□□□□□ -0.53
NEK3-210ENST00000620675 COPS4Q9BT78 406 aa11.77□□□□□ -0.53
NEK3-210ENST00000620675 WACQ9BTA9 647 aa11.77□□□□□ -0.53
NEK3-210ENST00000620675 RASSF4Q9H2L5 321 aa11.77□□□□□ -0.53
NEK3-210ENST00000620675 LIME1Q9H400 295 aa11.77□□□□□ -0.53
NEK3-210ENST00000620675 CDH20Q9HBT6 801 aa11.77□□□□□ -0.53
NEK3-210ENST00000620675 FZR1Q9UM11 496 aa11.77□□□□□ -0.53
NEK3-210ENST00000620675 RPL36Q9Y3U8 105 aaKnown RBP11.77□□□□□ -0.53
NEK3-210ENST00000620675 ZNF878C9JN71 531 aa11.76□□□□□ -0.53
NEK3-210ENST00000620675 ACSM4P0C7M7 580 aa11.76□□□□□ -0.53
NEK3-210ENST00000620675 OTX1P32242 354 aaPredicted RBP11.76□□□□□ -0.53
NEK3-210ENST00000620675 NKX6-1P78426 367 aaPredicted RBP11.76□□□□□ -0.53
NEK3-210ENST00000620675 TMED1Q13445 227 aa11.76□□□□□ -0.53
NEK3-210ENST00000620675 DOC2BQ14184 412 aa11.76□□□□□ -0.53
NEK3-210ENST00000620675 TMEM255AQ5JRV8 349 aa11.76□□□□□ -0.53
NEK3-210ENST00000620675 SPATA46Q5T0L3 261 aa11.76□□□□□ -0.53
NEK3-210ENST00000620675 ZNF322Q6U7Q0 402 aaPredicted RBP11.76□□□□□ -0.53
NEK3-210ENST00000620675 AKAP1Q92667 903 aaKnown RBP eCLIP11.76□□□□□ -0.53
NEK3-210ENST00000620675 COQ7Q99807 217 aa11.76□□□□□ -0.53
NEK3-210ENST00000620675 CLEC4MQ9H2X3 399 aaPredicted RBP11.76□□□□□ -0.53
NEK3-210ENST00000620675 BRD7Q9NPI1 651 aa11.76□□□□□ -0.53
NEK3-210ENST00000620675 MRPS18AQ9NVS2 196 aaKnown RBP11.76□□□□□ -0.53
NEK3-210ENST00000620675 MRM2Q9UI43 246 aaKnown RBP11.76□□□□□ -0.53
NEK3-210ENST00000620675 LRP12Q9Y561 859 aa11.76□□□□□ -0.53
NEK3-210ENST00000620675 AKAP9Q99996 3911 aa11.76□□□□□ -0.53
NEK3-210ENST00000620675 TEX15Q9BXT5 2789 aa11.76□□□□□ -0.53
NEK3-210ENST00000620675 DENRO43583 198 aaKnown RBP11.75□□□□□ -0.53
NEK3-210ENST00000620675 FAM20BO75063 409 aa11.75□□□□□ -0.53
NEK3-210ENST00000620675 OR2T7P0C7T2 308 aa11.75□□□□□ -0.53
NEK3-210ENST00000620675 COX5BP10606 129 aa11.75□□□□□ -0.53
NEK3-210ENST00000620675 C21orf33P30042 268 aaPredicted RBP11.75□□□□□ -0.53
NEK3-210ENST00000620675 NR1H2P55055 460 aa11.75□□□□□ -0.53
NEK3-210ENST00000620675 POU4F2Q12837 409 aa11.75□□□□□ -0.53
NEK3-210ENST00000620675 SNTB2Q13425 540 aaKnown RBP11.75□□□□□ -0.53
NEK3-210ENST00000620675 C1QTNF12Q5T7M4 302 aa11.75□□□□□ -0.53
NEK3-210ENST00000620675 AHSA2Q719I0 299 aa11.75□□□□□ -0.53
NEK3-210ENST00000620675 SSX8Q7RTT4 187 aa11.75□□□□□ -0.53
NEK3-210ENST00000620675 TMEM200AQ86VY9 491 aa11.75□□□□□ -0.53
NEK3-210ENST00000620675 ZNF454Q8N9F8 522 aa11.75□□□□□ -0.53
NEK3-210ENST00000620675 OR2T27Q8NH04 317 aa11.75□□□□□ -0.53
NEK3-210ENST00000620675 PPP1R14AQ96A00 147 aa11.75□□□□□ -0.53
NEK3-210ENST00000620675 OR8B4Q96RC9 309 aa11.75□□□□□ -0.53
NEK3-210ENST00000620675 ELOVL3Q9HB03 270 aa11.75□□□□□ -0.53
NEK3-210ENST00000620675 SLC24A3Q9HC58 644 aa11.75□□□□□ -0.53
NEK3-210ENST00000620675 ZNF319Q9P2F9 582 aa11.75□□□□□ -0.53
NEK3-210ENST00000620675 CLEC2DQ9UHP7 191 aa11.75□□□□□ -0.53
NEK3-210ENST00000620675 PSORS1C1Q9UIG5 152 aa11.75□□□□□ -0.53
NEK3-210ENST00000620675 N6AMT1Q9Y5N5 214 aa11.75□□□□□ -0.53
NEK3-210ENST00000620675 ATP23Q9Y6H3 246 aa11.75□□□□□ -0.53
NEK3-210ENST00000620675 PTGES3LE9PB15 166 aa11.75□□□□□ -0.53
NEK3-210ENST00000620675 ZNF670-ZNF695F2Z2N8 137 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms