RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 RSPO1Q2MKA7 263 aaPredicted RBP14.52□□□□□ -0.09
HMGN3-203ENST00000620514 CLEC12AQ5QGZ9 265 aa14.52□□□□□ -0.09
HMGN3-203ENST00000620514 ACSM5Q6NUN0 579 aa14.52□□□□□ -0.09
HMGN3-203ENST00000620514 LINC00346Q8IVM7 164 aa14.52□□□□□ -0.09
HMGN3-203ENST00000620514 OR5AS1Q8N127 324 aa14.52□□□□□ -0.09
HMGN3-203ENST00000620514 GJC3Q8NFK1 279 aa14.52□□□□□ -0.09
HMGN3-203ENST00000620514 OR2Z1Q8NG97 314 aa14.52□□□□□ -0.09
HMGN3-203ENST00000620514 PTP4A1Q93096 173 aa14.52□□□□□ -0.09
HMGN3-203ENST00000620514 RAB39BQ96DA2 213 aa14.52□□□□□ -0.09
HMGN3-203ENST00000620514 NSL1Q96IY1 281 aa14.52□□□□□ -0.09
HMGN3-203ENST00000620514 BTBD10Q9BSF8 475 aa14.52□□□□□ -0.09
HMGN3-203ENST00000620514 C19orf24Q9BVV8 132 aa14.52□□□□□ -0.09
HMGN3-203ENST00000620514 G6PC2Q9NQR9 355 aa14.52□□□□□ -0.09
HMGN3-203ENST00000620514 TUBG2Q9NRH3 451 aa14.52□□□□□ -0.09
HMGN3-203ENST00000620514 ACTR3BQ9P1U1 418 aa14.52□□□□□ -0.09
HMGN3-203ENST00000620514 ATPIF1Q9UII2 106 aa14.52□□□□□ -0.09
HMGN3-203ENST00000620514 TANC2Q9HCD6 1990 aa14.52□□□□□ -0.09
HMGN3-203ENST00000620514 TRAV20A0A0B4J274 112 aa14.51□□□□□ -0.09
HMGN3-203ENST00000620514 TCRBV5S2A0A599 114 aa14.51□□□□□ -0.09
HMGN3-203ENST00000620514 ISPDA4D126 451 aa14.51□□□□□ -0.09
HMGN3-203ENST00000620514 TNFRSF11BO00300 401 aa14.51□□□□□ -0.09
HMGN3-203ENST00000620514 AVPP01185 164 aa14.51□□□□□ -0.09
HMGN3-203ENST00000620514 NOS3P29474 1203 aa14.51□□□□□ -0.09
HMGN3-203ENST00000620514 HMGA2P52926 109 aa14.51□□□□□ -0.09
HMGN3-203ENST00000620514 COX10Q12887 443 aa14.51□□□□□ -0.09
HMGN3-203ENST00000620514 FAHD2BQ6P2I3 314 aaPredicted RBP14.51□□□□□ -0.09
HMGN3-203ENST00000620514 PGM2L1Q6PCE3 622 aa14.51□□□□□ -0.09
HMGN3-203ENST00000620514 CFAP77Q6ZQR2 320 aa14.51□□□□□ -0.09
HMGN3-203ENST00000620514 C1orf229Q6ZS94 237 aaPredicted RBP14.51□□□□□ -0.09
HMGN3-203ENST00000620514 ZBTB46Q86UZ6 589 aa14.51□□□□□ -0.09
HMGN3-203ENST00000620514 OR52E2Q8NGJ4 325 aa14.51□□□□□ -0.09
HMGN3-203ENST00000620514 OR4C15Q8NGM1 316 aa14.51□□□□□ -0.09
HMGN3-203ENST00000620514 ITLN1Q8WWA0 313 aa14.51□□□□□ -0.09
HMGN3-203ENST00000620514 FAHD2AQ96GK7 314 aa14.51□□□□□ -0.09
HMGN3-203ENST00000620514 DCLRE1CQ96SD1 692 aaKnown RBP14.51□□□□□ -0.09
HMGN3-203ENST00000620514 COQ7Q99807 217 aa14.51□□□□□ -0.09
HMGN3-203ENST00000620514 GAL3ST1Q99999 423 aa14.51□□□□□ -0.09
HMGN3-203ENST00000620514 PLA2G12AQ9BZM1 189 aa14.51□□□□□ -0.09
HMGN3-203ENST00000620514 HDHD2Q9H0R4 259 aa14.51□□□□□ -0.09
HMGN3-203ENST00000620514 METTL17Q9H7H0 456 aaPredicted RBP14.51□□□□□ -0.09
HMGN3-203ENST00000620514 CDH10Q9Y6N8 788 aa14.51□□□□□ -0.09
HMGN3-203ENST00000620514 KRT36O76013 467 aa14.5□□□□□ -0.09
HMGN3-203ENST00000620514 ANPEPP15144 967 aa14.5□□□□□ -0.09
HMGN3-203ENST00000620514 RAC2P15153 192 aa14.5□□□□□ -0.09
HMGN3-203ENST00000620514 MAGEA2P43356 314 aa14.5□□□□□ -0.09
HMGN3-203ENST00000620514 RGS6P49758 472 aa14.5□□□□□ -0.09
HMGN3-203ENST00000620514 MNAT1P51948 309 aa14.5□□□□□ -0.09
HMGN3-203ENST00000620514 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.5□□□□□ -0.09
HMGN3-203ENST00000620514 SLC3A1Q07837 685 aa14.5□□□□□ -0.09
HMGN3-203ENST00000620514 OR2T2Q6IF00 324 aa14.5□□□□□ -0.09
HMGN3-203ENST00000620514 SLC18B1Q6NT16 456 aa14.5□□□□□ -0.09
HMGN3-203ENST00000620514 RFLNBQ8N5W9 214 aa14.5□□□□□ -0.09
HMGN3-203ENST00000620514 CYB561A3Q8NBI2 242 aa14.5□□□□□ -0.09
HMGN3-203ENST00000620514 OR8D4Q8NGM9 314 aa14.5□□□□□ -0.09
HMGN3-203ENST00000620514 COG8Q96MW5 612 aa14.5□□□□□ -0.09
HMGN3-203ENST00000620514 TMEM106BQ9NUM4 274 aa14.5□□□□□ -0.09
HMGN3-203ENST00000620514 MRPL22Q9NWU5 206 aaKnown RBP14.5□□□□□ -0.09
HMGN3-203ENST00000620514 VNN3Q9NY84 501 aa14.5□□□□□ -0.09
HMGN3-203ENST00000620514 UBAP1Q9NZ09 502 aa14.5□□□□□ -0.09
HMGN3-203ENST00000620514 METRNQ9UJH8 293 aa14.5□□□□□ -0.09
HMGN3-203ENST00000620514 NPTNQ9Y639 398 aa14.5□□□□□ -0.09
HMGN3-203ENST00000620514 BHLHE40O14503 412 aa14.49□□□□□ -0.09
HMGN3-203ENST00000620514 TCF21O43680 179 aa14.49□□□□□ -0.09
HMGN3-203ENST00000620514 IDH3BO43837 385 aa14.49□□□□□ -0.09
HMGN3-203ENST00000620514 PNPP00491 289 aa14.49□□□□□ -0.09
HMGN3-203ENST00000620514 GASTP01350 101 aa14.49□□□□□ -0.09
HMGN3-203ENST00000620514 IGHV2-70P01814 119 aa14.49□□□□□ -0.09
HMGN3-203ENST00000620514 HLA-DQA2P01906 255 aa14.49□□□□□ -0.09
HMGN3-203ENST00000620514 T-ENOLP0DO92 83 aa14.49□□□□□ -0.09
HMGN3-203ENST00000620514 TNFSF4P23510 183 aa14.49□□□□□ -0.09
HMGN3-203ENST00000620514 PYCR1P32322 319 aa14.49□□□□□ -0.09
HMGN3-203ENST00000620514 GGT2P36268 569 aa14.49□□□□□ -0.09
HMGN3-203ENST00000620514 MS4A2Q01362 244 aa14.49□□□□□ -0.09
HMGN3-203ENST00000620514 KRTAP27-1Q3LI81 207 aa14.49□□□□□ -0.09
HMGN3-203ENST00000620514 ZNF770Q6IQ21 691 aaPredicted RBP14.49□□□□□ -0.09
HMGN3-203ENST00000620514 FBXW12Q6X9E4 464 aa14.49□□□□□ -0.09
HMGN3-203ENST00000620514 ZNRF4Q8WWF5 429 aa14.49□□□□□ -0.09
HMGN3-203ENST00000620514 APOBEC3DQ96AK3 386 aaPredicted RBP14.49□□□□□ -0.09
HMGN3-203ENST00000620514 DDOQ99489 341 aa14.49□□□□□ -0.09
HMGN3-203ENST00000620514 TRIM15Q9C019 465 aa14.49□□□□□ -0.09
HMGN3-203ENST00000620514 WDR76Q9H967 626 aa14.49□□□□□ -0.09
HMGN3-203ENST00000620514 DYSFO75923 2080 aa14.49□□□□□ -0.09
HMGN3-203ENST00000620514 LOC105371242A0A075B767 164 aa14.48□□□□□ -0.09
HMGN3-203ENST00000620514 H0YL77 283 aa14.48□□□□□ -0.09
HMGN3-203ENST00000620514 J3QW42 95 aa14.48□□□□□ -0.09
HMGN3-203ENST00000620514 CCNB2O95067 398 aa14.48□□□□□ -0.09
HMGN3-203ENST00000620514 SBK2P0C263 348 aa14.48□□□□□ -0.09
HMGN3-203ENST00000620514 PRSS12P56730 875 aa14.48□□□□□ -0.09
HMGN3-203ENST00000620514 SLC36A3Q495N2 470 aa14.48□□□□□ -0.09
HMGN3-203ENST00000620514 ZNF362Q5T0B9 420 aaPredicted RBP14.48□□□□□ -0.09
HMGN3-203ENST00000620514 LIPNQ5VXI9 398 aa14.48□□□□□ -0.09
HMGN3-203ENST00000620514 LCN8Q6JVE9 175 aa14.48□□□□□ -0.09
HMGN3-203ENST00000620514 SHQ1Q6PI26 577 aaKnown RBP14.48□□□□□ -0.09
HMGN3-203ENST00000620514 LYPD4Q6UWN0 246 aa14.48□□□□□ -0.09
HMGN3-203ENST00000620514 COLCA1Q6ZS62 124 aa14.48□□□□□ -0.09
HMGN3-203ENST00000620514 PEG10Q86TG7 708 aaKnown RBP14.48□□□□□ -0.09
HMGN3-203ENST00000620514 NAA40Q86UY6 237 aa14.48□□□□□ -0.09
HMGN3-203ENST00000620514 DHFR2Q86XF0 187 aa14.48□□□□□ -0.09
HMGN3-203ENST00000620514 ZNF283Q8N7M2 679 aa14.48□□□□□ -0.09
HMGN3-203ENST00000620514 ATG16L2Q8NAA4 619 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms