RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 RIIAD1A6NNX1 92 aa13.64□□□□□ -0.23
BRCA1-228ENST00000618469 TIPRLO75663 272 aa13.64□□□□□ -0.23
BRCA1-228ENST00000618469 GYPBP06028 91 aa13.64□□□□□ -0.23
BRCA1-228ENST00000618469 ZNF16P17020 682 aaPredicted RBP13.64□□□□□ -0.23
BRCA1-228ENST00000618469 ZNF3P17036 446 aa13.64□□□□□ -0.23
BRCA1-228ENST00000618469 GIFP27352 417 aa13.64□□□□□ -0.23
BRCA1-228ENST00000618469 POU1F1P28069 291 aa13.64□□□□□ -0.23
BRCA1-228ENST00000618469 RPS27P42677 84 aaKnown RBP13.64□□□□□ -0.23
BRCA1-228ENST00000618469 HIST1H3AP68431 136 aa13.64□□□□□ -0.23
BRCA1-228ENST00000618469 CCL8P80075 99 aa13.64□□□□□ -0.23
BRCA1-228ENST00000618469 MOGQ16653 247 aa13.64□□□□□ -0.23
BRCA1-228ENST00000618469 PCGF3Q3KNV8 242 aa13.64□□□□□ -0.23
BRCA1-228ENST00000618469 ZNF362Q5T0B9 420 aaPredicted RBP13.64□□□□□ -0.23
BRCA1-228ENST00000618469 HIST2H3PS2Q5TEC6 136 aa13.64□□□□□ -0.23
BRCA1-228ENST00000618469 C1orf146Q5VVC0 180 aa13.64□□□□□ -0.23
BRCA1-228ENST00000618469 SLC18B1Q6NT16 456 aa13.64□□□□□ -0.23
BRCA1-228ENST00000618469 LYPD4Q6UWN0 246 aa13.64□□□□□ -0.23
BRCA1-228ENST00000618469 HIST2H3AQ71DI3 136 aa13.64□□□□□ -0.23
BRCA1-228ENST00000618469 PAPD5Q8NDF8 572 aaKnown RBP13.64□□□□□ -0.23
BRCA1-228ENST00000618469 ZNF540Q8NDQ6 660 aa13.64□□□□□ -0.23
BRCA1-228ENST00000618469 OR2AJ1Q8NGZ0 328 aa13.64□□□□□ -0.23
BRCA1-228ENST00000618469 DDOQ99489 341 aa13.64□□□□□ -0.23
BRCA1-228ENST00000618469 COQ7Q99807 217 aa13.64□□□□□ -0.23
BRCA1-228ENST00000618469 RBM4Q9BWF3 364 aaKnown RBP13.64□□□□□ -0.23
BRCA1-228ENST00000618469 CDADC1Q9BWV3 514 aa13.64□□□□□ -0.23
BRCA1-228ENST00000618469 ZNF556Q9HAH1 456 aa13.64□□□□□ -0.23
BRCA1-228ENST00000618469 TBCCD1Q9NVR7 557 aa13.64□□□□□ -0.23
BRCA1-228ENST00000618469 KIF17Q9P2E2 1029 aa13.64□□□□□ -0.23
BRCA1-228ENST00000618469 COMMD3-BMI1R4GMX3 469 aa13.64□□□□□ -0.23
BRCA1-228ENST00000618469 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.63□□□□□ -0.232e-6■■■■□ 24
BRCA1-228ENST00000618469 ZSCAN5BA6NJL1 495 aa13.63□□□□□ -0.23
BRCA1-228ENST00000618469 A8MV72 311 aaPredicted RBP13.63□□□□□ -0.23
BRCA1-228ENST00000618469 TPD52L2O43399 206 aaKnown RBP13.63□□□□□ -0.23
BRCA1-228ENST00000618469 TLX2O43763 284 aaPredicted RBP13.63□□□□□ -0.23
BRCA1-228ENST00000618469 TIMM8AO60220 97 aaPredicted RBP13.63□□□□□ -0.23
BRCA1-228ENST00000618469 DEAF1O75398 565 aaPredicted RBP13.63□□□□□ -0.23
BRCA1-228ENST00000618469 ZNF823P16415 610 aa13.63□□□□□ -0.23
BRCA1-228ENST00000618469 SPI1P17947 270 aa13.63□□□□□ -0.23
BRCA1-228ENST00000618469 GRK5P34947 590 aa13.63□□□□□ -0.23
BRCA1-228ENST00000618469 GGT2P36268 569 aa13.63□□□□□ -0.23
BRCA1-228ENST00000618469 ZNF81P51508 661 aa13.63□□□□□ -0.23
BRCA1-228ENST00000618469 ATG16L2Q8NAA4 619 aa13.63□□□□□ -0.23
BRCA1-228ENST00000618469 OR6K6Q8NGW6 343 aa13.63□□□□□ -0.23
BRCA1-228ENST00000618469 ZNRF4Q8WWF5 429 aa13.63□□□□□ -0.23
BRCA1-228ENST00000618469 RDH5Q92781 318 aa13.63□□□□□ -0.23
BRCA1-228ENST00000618469 PITX2Q99697 317 aa13.63□□□□□ -0.23
BRCA1-228ENST00000618469 ATF6BQ99941 703 aa13.63□□□□□ -0.23
BRCA1-228ENST00000618469 MMADHCQ9H3L0 296 aaPredicted RBP13.63□□□□□ -0.23
BRCA1-228ENST00000618469 CHODLQ9H9P2 273 aa13.63□□□□□ -0.23
BRCA1-228ENST00000618469 CMC2Q9NRP2 79 aa13.63□□□□□ -0.23
BRCA1-228ENST00000618469 CYB5R1Q9UHQ9 305 aa13.63□□□□□ -0.23
BRCA1-228ENST00000618469 KCNG2Q9UJ96 466 aa13.63□□□□□ -0.23
BRCA1-228ENST00000618469 YLPM1P49750 1951 aaKnown RBP13.62□□□□□ -0.23
BRCA1-228ENST00000618469 SPRY3O43610 288 aa13.62□□□□□ -0.23
BRCA1-228ENST00000618469 SPARCP09486 303 aa13.62□□□□□ -0.23
BRCA1-228ENST00000618469 IGHV4-31P0DP07 118 aa13.62□□□□□ -0.23
BRCA1-228ENST00000618469 CLUP10909 449 aa13.62□□□□□ -0.23
BRCA1-228ENST00000618469 PSKH1P11801 424 aa13.62□□□□□ -0.23
BRCA1-228ENST00000618469 ACHEP22303 614 aa13.62□□□□□ -0.23
BRCA1-228ENST00000618469 PRKACGP22612 351 aa13.62□□□□□ -0.23
BRCA1-228ENST00000618469 RGS6P49758 472 aa13.62□□□□□ -0.23
BRCA1-228ENST00000618469 MMP15P51511 669 aa13.62□□□□□ -0.23
BRCA1-228ENST00000618469 SLC25A1P53007 311 aa13.62□□□□□ -0.23
BRCA1-228ENST00000618469 RIN1Q13671 783 aa13.62□□□□□ -0.23
BRCA1-228ENST00000618469 TSTQ16762 297 aaKnown RBP13.62□□□□□ -0.23
BRCA1-228ENST00000618469 C6orf52Q5T4I8 152 aa13.62□□□□□ -0.23
BRCA1-228ENST00000618469 SLC27A4Q6P1M0 643 aa13.62□□□□□ -0.23
BRCA1-228ENST00000618469 YIPF5Q969M3 257 aa13.62□□□□□ -0.23
BRCA1-228ENST00000618469 OTULINQ96BN8 352 aa13.62□□□□□ -0.23
BRCA1-228ENST00000618469 DCLRE1CQ96SD1 692 aaKnown RBP13.62□□□□□ -0.23
BRCA1-228ENST00000618469 NMNAT2Q9BZQ4 307 aa13.62□□□□□ -0.23
BRCA1-228ENST00000618469 SAP30LQ9HAJ7 183 aa13.62□□□□□ -0.23
BRCA1-228ENST00000618469 PTTG3PQ9NZH4 202 aa13.62□□□□□ -0.23
BRCA1-228ENST00000618469 CGGBP1Q9UFW8 167 aaPredicted RBP13.62□□□□□ -0.23
BRCA1-228ENST00000618469 STARD10Q9Y365 291 aa13.62□□□□□ -0.23
BRCA1-228ENST00000618469 LRP5LA4QPB2 252 aa13.61□□□□□ -0.23
BRCA1-228ENST00000618469 FAM183AA6NL82 134 aa13.61□□□□□ -0.23
BRCA1-228ENST00000618469 J3QW42 95 aa13.61□□□□□ -0.23
BRCA1-228ENST00000618469 CDC14BO60729 498 aa13.61□□□□□ -0.23
BRCA1-228ENST00000618469 CIB2O75838 187 aa13.61□□□□□ -0.23
BRCA1-228ENST00000618469 IGHV1-46P01743 117 aa13.61□□□□□ -0.23
BRCA1-228ENST00000618469 OSMP13725 252 aa13.61□□□□□ -0.23
BRCA1-228ENST00000618469 ANXA8P13928 327 aa13.61□□□□□ -0.23
BRCA1-228ENST00000618469 ZNF23P17027 643 aa13.61□□□□□ -0.23
BRCA1-228ENST00000618469 COL8A2P25067 703 aa13.61□□□□□ -0.23
BRCA1-228ENST00000618469 FMO3P31513 532 aa13.61□□□□□ -0.23
BRCA1-228ENST00000618469 GPR6P46095 362 aaPredicted RBP13.61□□□□□ -0.23
BRCA1-228ENST00000618469 PSG7Q13046 419 aa13.61□□□□□ -0.23
BRCA1-228ENST00000618469 CCNIQ14094 377 aa13.61□□□□□ -0.23
BRCA1-228ENST00000618469 TRIP10Q15642 601 aa13.61□□□□□ -0.23
BRCA1-228ENST00000618469 ZMAT1Q5H9K5 638 aa13.61□□□□□ -0.23
BRCA1-228ENST00000618469 SHQ1Q6PI26 577 aaKnown RBP13.61□□□□□ -0.23
BRCA1-228ENST00000618469 APOBEC3DQ96AK3 386 aaPredicted RBP13.61□□□□□ -0.23
BRCA1-228ENST00000618469 MAP6Q96JE9 813 aa13.61□□□□□ -0.23
BRCA1-228ENST00000618469 COG8Q96MW5 612 aa13.61□□□□□ -0.23
BRCA1-228ENST00000618469 C19orf24Q9BVV8 132 aa13.61□□□□□ -0.23
BRCA1-228ENST00000618469 HCAR1Q9BXC0 346 aa13.61□□□□□ -0.23
BRCA1-228ENST00000618469 MED20Q9H944 212 aa13.61□□□□□ -0.23
BRCA1-228ENST00000618469 WDR76Q9H967 626 aa13.61□□□□□ -0.23
BRCA1-228ENST00000618469 NTN4Q9HB63 628 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms