RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 MSRB3Q8IXL7 192 aa9.71□□□□□ -0.86
CLTCL1-209ENST00000617103 NECAP1Q8NC96 275 aa9.71□□□□□ -0.86
CLTCL1-209ENST00000617103 SIGLEC11Q96RL6 698 aa9.71□□□□□ -0.86
CLTCL1-209ENST00000617103 MAP3K3Q99759 626 aa9.71□□□□□ -0.86
CLTCL1-209ENST00000617103 C19orf43Q9BQ61 176 aa9.71□□□□□ -0.86
CLTCL1-209ENST00000617103 MRPL22Q9NWU5 206 aaKnown RBP9.71□□□□□ -0.86
CLTCL1-209ENST00000617103 IL20Q9NYY1 176 aa9.71□□□□□ -0.86
CLTCL1-209ENST00000617103 SLC5A6Q9Y289 635 aa9.71□□□□□ -0.86
CLTCL1-209ENST00000617103 NINQ8N4C6 2090 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 SLC17A2O00624 439 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 WNT1P04628 370 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 FGF7P21781 194 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 AKR1C3P42330 323 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 RBP2P50120 134 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 SLC17A1Q14916 467 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 PCK2Q16822 640 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 GSG1Q2KHT4 349 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 PYCR3Q53H96 274 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 ELFN2Q5R3F8 820 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 ZNF787Q6DD87 383 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 PLXDC2Q6UX71 529 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 DND1Q8IYX4 353 aaKnown RBP9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 SIRT6Q8N6T7 355 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 RPUSD4Q96CM3 377 aaKnown RBP9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 ORAI1Q96D31 301 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 OPA3Q9H6K4 179 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 KIR3DX1Q9H7L2 352 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 MMP26Q9NRE1 261 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 SLC22A13Q9Y226 551 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 V9GYS6 101 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 A0A087WV62 115 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 NSG1A0A0A6YYJ2 146 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 GPR31O00270 319 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 GABRA2P47869 451 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 MEOX2P50222 304 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 GPR85P60893 370 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 ANKRD16Q6P6B7 361 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 SMIM15Q7Z3B0 74 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 SIGLECL1Q8N7X8 197 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 DTWD2Q8NBA8 298 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 OR4F5Q8NH21 305 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 OR10J5Q8NHC4 309 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 GPX8Q8TED1 209 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 EDAQ92838 391 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 OR4F4Q96R69 305 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 GDF2Q9UK05 429 aaPredicted RBP9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 NRXN3Q9Y4C0 1643 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 OR5H8P0DN80 308 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 IRS1P35568 1242 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 TNFRSF4P43489 277 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 RPL18Q07020 188 aaKnown RBP9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 PRAMEF20Q5VT98 475 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 TMEM268Q5VZI3 342 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 RBMXL3Q8N7X1 1067 aaKnown RBP9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 OR4D10Q8NGI6 311 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 AKR7LQ8NHP1 331 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 GOT1L1Q8NHS2 421 aaPredicted RBP9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 REEP6Q96HR9 211 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 CTSFQ9UBX1 484 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 CCL26Q9Y258 94 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 A6NCN8 305 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 G3V3Q6 166 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 CD63P08962 238 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 AVPR2P30518 371 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 RPS27P42677 84 aaKnown RBP9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 RANP62826 216 aaKnown RBP9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 EEF1A2Q05639 463 aaKnown RBP9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 PPP1R3BQ86XI6 285 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 CATSPERDQ86XM0 798 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 ARRDC1Q8N5I2 433 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 GPR119Q8TDV5 335 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 PHYHIPLQ96FC7 376 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 PIGQQ9BRB3 760 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 MARCH5Q9NX47 278 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 DNMT3BQ9UBC3 853 aaKnown RBP9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 KCND3Q9UK17 655 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 BOKQ9UMX3 212 aaPredicted RBP9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 A4GNTQ9UNA3 340 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 NUP98P52948 1817 aa9.7□□□□□ -0.86
CLTCL1-209ENST00000617103 A0A1W2PPQ1 181 aa9.69□□□□□ -0.86
CLTCL1-209ENST00000617103 PRSS23O95084 383 aa9.69□□□□□ -0.86
CLTCL1-209ENST00000617103 NXPH2O95156 264 aa9.69□□□□□ -0.86
CLTCL1-209ENST00000617103 OR8U8P0C7N1 319 aa9.69□□□□□ -0.86
CLTCL1-209ENST00000617103 RRASP10301 218 aa9.69□□□□□ -0.86
CLTCL1-209ENST00000617103 COL13A1Q5TAT6 717 aaPredicted RBP9.69□□□□□ -0.86
CLTCL1-209ENST00000617103 NCR3LG1Q68D85 454 aa9.69□□□□□ -0.86
CLTCL1-209ENST00000617103 MAMSTRQ6ZN01 415 aa9.69□□□□□ -0.86
CLTCL1-209ENST00000617103 ZNF813Q6ZN06 617 aa9.69□□□□□ -0.86
CLTCL1-209ENST00000617103 SLC25A43Q8WUT9 341 aaPredicted RBP9.69□□□□□ -0.86
CLTCL1-209ENST00000617103 BADQ92934 168 aa9.69□□□□□ -0.86
CLTCL1-209ENST00000617103 TMEM30AQ9NV96 361 aa9.69□□□□□ -0.86
CLTCL1-209ENST00000617103 KCNG2Q9UJ96 466 aa9.69□□□□□ -0.86
CLTCL1-209ENST00000617103 SLCO1B1Q9Y6L6 691 aa9.69□□□□□ -0.86
CLTCL1-209ENST00000617103 LEUTXA8MZ59 168 aa9.69□□□□□ -0.86
CLTCL1-209ENST00000617103 UPK1AO00322 258 aa9.69□□□□□ -0.86
CLTCL1-209ENST00000617103 SIGLEC6O43699 453 aa9.69□□□□□ -0.86
CLTCL1-209ENST00000617103 GLSO94925 669 aaPredicted RBP9.69□□□□□ -0.86
CLTCL1-209ENST00000617103 LIMS3P0CW19 117 aa9.69□□□□□ -0.86
CLTCL1-209ENST00000617103 LIMS4P0CW20 117 aa9.69□□□□□ -0.86
CLTCL1-209ENST00000617103 SPP1P10451 314 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms