RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 G3V3Y1 287 aa13.94□□□□□ -0.18
NR1H3-235ENST00000616973 H7C417 338 aa13.94□□□□□ -0.18
NR1H3-235ENST00000616973 GMDSO60547 372 aa13.94□□□□□ -0.18
NR1H3-235ENST00000616973 GABRA1P14867 456 aa13.94□□□□□ -0.18
NR1H3-235ENST00000616973 PSMB1P20618 241 aaKnown RBP13.94□□□□□ -0.18
NR1H3-235ENST00000616973 CDAP32320 146 aa13.94□□□□□ -0.18
NR1H3-235ENST00000616973 GZMKP49863 264 aa13.94□□□□□ -0.18
NR1H3-235ENST00000616973 B3GALT5-AS1P59052 145 aa13.94□□□□□ -0.18
NR1H3-235ENST00000616973 LSM6P62312 80 aaKnown RBP13.94□□□□□ -0.18
NR1H3-235ENST00000616973 CDK10Q15131 360 aa13.94□□□□□ -0.18
NR1H3-235ENST00000616973 KCNE4Q8WWG9 221 aa13.94□□□□□ -0.18
NR1H3-235ENST00000616973 PTX4Q96A99 478 aa13.94□□□□□ -0.18
NR1H3-235ENST00000616973 INTS12Q96CB8 462 aaKnown RBP13.94□□□□□ -0.18
NR1H3-235ENST00000616973 OR51J1Q9H342 316 aa13.94□□□□□ -0.18
NR1H3-235ENST00000616973 PNRC2Q9NPJ4 139 aaKnown RBP13.94□□□□□ -0.18
NR1H3-235ENST00000616973 TAS2R8Q9NYW2 309 aa13.94□□□□□ -0.18
NR1H3-235ENST00000616973 MTFP1Q9UDX5 166 aa13.94□□□□□ -0.18
NR1H3-235ENST00000616973 MRPS18CQ9Y3D5 142 aaKnown RBP13.94□□□□□ -0.18
NR1H3-235ENST00000616973 A0A0J9YW62 118 aa13.93□□□□□ -0.18
NR1H3-235ENST00000616973 PMS2P1A4D2B8 440 aa13.93□□□□□ -0.18
NR1H3-235ENST00000616973 CDX4O14627 284 aaPredicted RBP13.93□□□□□ -0.18
NR1H3-235ENST00000616973 LDLRAD4O15165 306 aa13.93□□□□□ -0.18
NR1H3-235ENST00000616973 SYT7O43581 403 aa13.93□□□□□ -0.18
NR1H3-235ENST00000616973 RBBP9O75884 186 aa13.93□□□□□ -0.18
NR1H3-235ENST00000616973 STOMP27105 288 aa13.93□□□□□ -0.18
NR1H3-235ENST00000616973 HSD11B1P28845 292 aa13.93□□□□□ -0.18
NR1H3-235ENST00000616973 CSNK1A1P48729 337 aa13.93□□□□□ -0.18
NR1H3-235ENST00000616973 SUCLG1P53597 346 aaKnown RBP13.93□□□□□ -0.18
NR1H3-235ENST00000616973 SSBP1Q04837 148 aaKnown RBP13.93□□□□□ -0.18
NR1H3-235ENST00000616973 ACER2Q5QJU3 275 aa13.93□□□□□ -0.18
NR1H3-235ENST00000616973 GLYATL3Q5SZD4 288 aa13.93□□□□□ -0.18
NR1H3-235ENST00000616973 BIVMQ86UB2 503 aa13.93□□□□□ -0.18
NR1H3-235ENST00000616973 NAXDQ8IW45 347 aa13.93□□□□□ -0.18
NR1H3-235ENST00000616973 OR51A2Q8NGJ7 313 aa13.93□□□□□ -0.18
NR1H3-235ENST00000616973 PHF21AQ96BD5 680 aa13.93□□□□□ -0.18
NR1H3-235ENST00000616973 SF3B5Q9BWJ5 86 aaKnown RBP13.93□□□□□ -0.18
NR1H3-235ENST00000616973 C20orf85Q9H1P6 137 aa13.93□□□□□ -0.18
NR1H3-235ENST00000616973 P4HTMQ9NXG6 502 aa13.93□□□□□ -0.18
NR1H3-235ENST00000616973 MRPL15Q9P015 296 aaKnown RBP13.93□□□□□ -0.18
NR1H3-235ENST00000616973 RHBDD3Q9Y3P4 386 aa13.93□□□□□ -0.18
NR1H3-235ENST00000616973 MRPS18BQ9Y676 258 aaKnown RBP13.93□□□□□ -0.18
NR1H3-235ENST00000616973 MED12Q93074 2177 aa13.92□□□□□ -0.18
NR1H3-235ENST00000616973 NCOA6Q14686 2063 aaPredicted RBP13.92□□□□□ -0.18
NR1H3-235ENST00000616973 A0A0A6YYH2 397 aa13.92□□□□□ -0.18
NR1H3-235ENST00000616973 A6NJ64 397 aa13.92□□□□□ -0.18
NR1H3-235ENST00000616973 NPIPA2E9PIF3 369 aa13.92□□□□□ -0.18
NR1H3-235ENST00000616973 NPIPA3F8WFD2 350 aa13.92□□□□□ -0.18
NR1H3-235ENST00000616973 DOK2O60496 412 aa13.92□□□□□ -0.18
NR1H3-235ENST00000616973 LMX1BO60663 402 aa13.92□□□□□ -0.18
NR1H3-235ENST00000616973 PRAF2O60831 178 aa13.92□□□□□ -0.18
NR1H3-235ENST00000616973 PEX14O75381 377 aa13.92□□□□□ -0.18
NR1H3-235ENST00000616973 PTHLHP12272 177 aa13.92□□□□□ -0.18
NR1H3-235ENST00000616973 CTSSP25774 331 aa13.92□□□□□ -0.18
NR1H3-235ENST00000616973 BCL2A1Q16548 175 aa13.92□□□□□ -0.18
NR1H3-235ENST00000616973 TMEM255AQ5JRV8 349 aa13.92□□□□□ -0.18
NR1H3-235ENST00000616973 B3GNTL1Q67FW5 361 aaPredicted RBP13.92□□□□□ -0.18
NR1H3-235ENST00000616973 SFRP4Q6FHJ7 346 aaPredicted RBP13.92□□□□□ -0.18
NR1H3-235ENST00000616973 FGD2Q7Z6J4 655 aa13.92□□□□□ -0.18
NR1H3-235ENST00000616973 ADGRE4PQ86SQ3 457 aa13.92□□□□□ -0.18
NR1H3-235ENST00000616973 TMEM123Q8N131 208 aa13.92□□□□□ -0.18
NR1H3-235ENST00000616973 BEST3Q8N1M1 668 aa13.92□□□□□ -0.18
NR1H3-235ENST00000616973 ESX1Q8N693 406 aa13.92□□□□□ -0.18
NR1H3-235ENST00000616973 OR9K2Q8NGE7 335 aa13.92□□□□□ -0.18
NR1H3-235ENST00000616973 FGGYQ96C11 551 aa13.92□□□□□ -0.18
NR1H3-235ENST00000616973 SORCS2Q96PQ0 1159 aa13.92□□□□□ -0.18
NR1H3-235ENST00000616973 ASH2LQ9UBL3 628 aa13.92□□□□□ -0.18
NR1H3-235ENST00000616973 SPEGQ15772 3267 aa13.92□□□□□ -0.18
NR1H3-235ENST00000616973 DMDP11532 3685 aa13.92□□□□□ -0.18
NR1H3-235ENST00000616973 A0A1B0GTI1 187 aa13.92□□□□□ -0.18
NR1H3-235ENST00000616973 BDKRB2P30411 391 aa13.92□□□□□ -0.18
NR1H3-235ENST00000616973 AVPR2P30518 371 aa13.92□□□□□ -0.18
NR1H3-235ENST00000616973 CLDN6P56747 220 aa13.92□□□□□ -0.18
NR1H3-235ENST00000616973 GRB2P62993 217 aaKnown RBP13.92□□□□□ -0.18
NR1H3-235ENST00000616973 SPOCK1Q08629 439 aa13.92□□□□□ -0.18
NR1H3-235ENST00000616973 FAPQ12884 760 aa13.92□□□□□ -0.18
NR1H3-235ENST00000616973 EIF3IQ13347 325 aaKnown RBP13.92□□□□□ -0.18
NR1H3-235ENST00000616973 TNK1Q13470 666 aa13.92□□□□□ -0.18
NR1H3-235ENST00000616973 SF3B4Q15427 424 aaKnown RBP eCLIP13.92□□□□□ -0.187e-7■■■■□ 23.2
NR1H3-235ENST00000616973 FCN2Q15485 313 aa13.92□□□□□ -0.18
NR1H3-235ENST00000616973 TAF13Q15543 124 aa13.92□□□□□ -0.18
NR1H3-235ENST00000616973 ZNF529Q6P280 563 aa13.92□□□□□ -0.18
NR1H3-235ENST00000616973 ZNF813Q6ZN06 617 aa13.92□□□□□ -0.18
NR1H3-235ENST00000616973 PNPLA2Q96AD5 504 aa13.92□□□□□ -0.18
NR1H3-235ENST00000616973 UTP23Q9BRU9 249 aaKnown RBP13.92□□□□□ -0.18
NR1H3-235ENST00000616973 GPR87Q9BY21 358 aa13.92□□□□□ -0.18
NR1H3-235ENST00000616973 FAM117AQ9C073 453 aa13.92□□□□□ -0.18
NR1H3-235ENST00000616973 CGGBP1Q9UFW8 167 aaPredicted RBP13.92□□□□□ -0.18
NR1H3-235ENST00000616973 TRAV18A0A075B6X5 111 aa13.91□□□□□ -0.18
NR1H3-235ENST00000616973 CCDC187A0A096LP49 1063 aa13.91□□□□□ -0.18
NR1H3-235ENST00000616973 A0A1B0GVI7 797 aa13.91□□□□□ -0.18
NR1H3-235ENST00000616973 DCDC2BA2VCK2 349 aa13.91□□□□□ -0.18
NR1H3-235ENST00000616973 SULT1C2O00338 296 aa13.91□□□□□ -0.18
NR1H3-235ENST00000616973 CSF1P09603 554 aa13.91□□□□□ -0.18
NR1H3-235ENST00000616973 RAB6AP20340 208 aa13.91□□□□□ -0.18
NR1H3-235ENST00000616973 FAUP35544 74 aaKnown RBP13.91□□□□□ -0.18
NR1H3-235ENST00000616973 RAC3P60763 192 aa13.91□□□□□ -0.18
NR1H3-235ENST00000616973 CCDC157Q569K6 752 aa13.91□□□□□ -0.18
NR1H3-235ENST00000616973 TMEM164Q5U3C3 297 aa13.91□□□□□ -0.18
NR1H3-235ENST00000616973 OR1J2Q8NGS2 313 aa13.91□□□□□ -0.18
NR1H3-235ENST00000616973 OR6N1Q8NGY5 312 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms