RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 FAM205BPQ63HN1 556 aa15.15■□□□□ 0.02
TRAPPC3-209ENST00000616395 PLBD1Q6P4A8 553 aa15.15■□□□□ 0.02
TRAPPC3-209ENST00000616395 C1orf162Q8NEQ5 155 aaPredicted RBP15.15■□□□□ 0.02
TRAPPC3-209ENST00000616395 RAB2BQ8WUD1 216 aa15.15■□□□□ 0.02
TRAPPC3-209ENST00000616395 NEU4Q8WWR8 484 aaPredicted RBP15.15■□□□□ 0.02
TRAPPC3-209ENST00000616395 ZHX1-C8orf76Q96EF9 292 aa15.15■□□□□ 0.02
TRAPPC3-209ENST00000616395 KATNB1Q9BVA0 655 aa15.15■□□□□ 0.02
TRAPPC3-209ENST00000616395 INPP5EQ9NRR6 644 aa15.15■□□□□ 0.02
TRAPPC3-209ENST00000616395 GRIP1Q9Y3R0 1128 aa15.15■□□□□ 0.02
TRAPPC3-209ENST00000616395 PRKDCP78527 4128 aaKnown RBP15.14■□□□□ 0.01
TRAPPC3-209ENST00000616395 IGHV1-18A0A0C4DH31 117 aa15.14■□□□□ 0.01
TRAPPC3-209ENST00000616395 A6NIZ1 184 aa15.14■□□□□ 0.01
TRAPPC3-209ENST00000616395 MCIDASD6RGH6 385 aa15.14■□□□□ 0.01
TRAPPC3-209ENST00000616395 LYNX1G3V0Z9 82 aa15.14■□□□□ 0.01
TRAPPC3-209ENST00000616395 PMS2P2O95744 297 aa15.14■□□□□ 0.01
TRAPPC3-209ENST00000616395 HTR1AP08908 422 aa15.14■□□□□ 0.01
TRAPPC3-209ENST00000616395 LYNX1P0DP58 116 aa15.14■□□□□ 0.01
TRAPPC3-209ENST00000616395 AHCYP23526 432 aa15.14■□□□□ 0.01
TRAPPC3-209ENST00000616395 GRPRP30550 384 aa15.14■□□□□ 0.01
TRAPPC3-209ENST00000616395 DAP3P51398 398 aaKnown RBP15.14■□□□□ 0.01
TRAPPC3-209ENST00000616395 BLVRAP53004 296 aa15.14■□□□□ 0.01
TRAPPC3-209ENST00000616395 FXYD6P3P58550 94 aa15.14■□□□□ 0.01
TRAPPC3-209ENST00000616395 RAP1BP61224 184 aa15.14■□□□□ 0.01
TRAPPC3-209ENST00000616395 RAP1AP62834 184 aa15.14■□□□□ 0.01
TRAPPC3-209ENST00000616395 RPL18Q07020 188 aaKnown RBP15.14■□□□□ 0.01
TRAPPC3-209ENST00000616395 PIGFQ07326 219 aa15.14■□□□□ 0.01
TRAPPC3-209ENST00000616395 TIMM50Q3ZCQ8 353 aa15.14■□□□□ 0.01
TRAPPC3-209ENST00000616395 SYT6Q5T7P8 510 aaPredicted RBP15.14■□□□□ 0.01
TRAPPC3-209ENST00000616395 XAF1Q6GPH4 301 aa15.14■□□□□ 0.01
TRAPPC3-209ENST00000616395 TMPRSS11AQ6ZMR5 421 aa15.14■□□□□ 0.01
TRAPPC3-209ENST00000616395 ADCK1Q86TW2 530 aa15.14■□□□□ 0.01
TRAPPC3-209ENST00000616395 ALDH16A1Q8IZ83 802 aa15.14■□□□□ 0.01
TRAPPC3-209ENST00000616395 PROKR2Q8NFJ6 384 aa15.14■□□□□ 0.01
TRAPPC3-209ENST00000616395 UBASH3BQ8TF42 649 aa15.14■□□□□ 0.01
TRAPPC3-209ENST00000616395 MOGAT1Q96PD6 335 aa15.14■□□□□ 0.01
TRAPPC3-209ENST00000616395 ESM1Q9NQ30 184 aa15.14■□□□□ 0.01
TRAPPC3-209ENST00000616395 TRAPPC4Q9Y296 219 aa15.14■□□□□ 0.01
TRAPPC3-209ENST00000616395 TXNDC12O95881 172 aa15.13■□□□□ 0.01
TRAPPC3-209ENST00000616395 ERCC1P07992 297 aaPredicted RBP15.13■□□□□ 0.01
TRAPPC3-209ENST00000616395 MSMBP08118 114 aa15.13■□□□□ 0.01
TRAPPC3-209ENST00000616395 ERVK-25P63136 954 aa15.13■□□□□ 0.01
TRAPPC3-209ENST00000616395 ZP4Q12836 540 aa15.13■□□□□ 0.01
TRAPPC3-209ENST00000616395 MED22Q15528 200 aa15.13■□□□□ 0.01
TRAPPC3-209ENST00000616395 OR7A5Q15622 319 aa15.13■□□□□ 0.01
TRAPPC3-209ENST00000616395 TIGD6Q17RP2 521 aa15.13■□□□□ 0.01
TRAPPC3-209ENST00000616395 GPR107Q5VW38 600 aa15.13■□□□□ 0.01
TRAPPC3-209ENST00000616395 NIPAL3Q6P499 406 aa15.13■□□□□ 0.01
TRAPPC3-209ENST00000616395 C1orf229Q6ZS94 237 aaPredicted RBP15.13■□□□□ 0.01
TRAPPC3-209ENST00000616395 H1FNTQ75WM6 255 aaPredicted RBP15.13■□□□□ 0.01
TRAPPC3-209ENST00000616395 POMGNT2Q8NAT1 580 aa15.13■□□□□ 0.01
TRAPPC3-209ENST00000616395 SLC37A3Q8NCC5 494 aa15.13■□□□□ 0.01
TRAPPC3-209ENST00000616395 ADPRHL1Q8NDY3 354 aa15.13■□□□□ 0.01
TRAPPC3-209ENST00000616395 OR2T4Q8NH00 348 aa15.13■□□□□ 0.01
TRAPPC3-209ENST00000616395 SIGLEC11Q96RL6 698 aa15.13■□□□□ 0.01
TRAPPC3-209ENST00000616395 NAA11Q9BSU3 229 aaPredicted RBP15.13■□□□□ 0.01
TRAPPC3-209ENST00000616395 OR51V1Q9H2C8 321 aa15.13■□□□□ 0.01
TRAPPC3-209ENST00000616395 HINT3Q9NQE9 182 aaKnown RBP15.13■□□□□ 0.01
TRAPPC3-209ENST00000616395 SLC7A10Q9NS82 523 aa15.13■□□□□ 0.01
TRAPPC3-209ENST00000616395 HAO2Q9NYQ3 351 aa15.13■□□□□ 0.01
TRAPPC3-209ENST00000616395 LRRN3E7EW58 273 aa15.12■□□□□ 0.01
TRAPPC3-209ENST00000616395 H3BSA7 217 aa15.12■□□□□ 0.01
TRAPPC3-209ENST00000616395 GPR171O14626 319 aa15.12■□□□□ 0.01
TRAPPC3-209ENST00000616395 EIF1BO60739 113 aaKnown RBP15.12■□□□□ 0.01
TRAPPC3-209ENST00000616395 AKR7A3O95154 331 aa15.12■□□□□ 0.01
TRAPPC3-209ENST00000616395 WNT11O96014 354 aa15.12■□□□□ 0.01
TRAPPC3-209ENST00000616395 TSPAN19P0C672 248 aa15.12■□□□□ 0.01
TRAPPC3-209ENST00000616395 HIST1H1CP16403 213 aaKnown RBP15.12■□□□□ 0.01
TRAPPC3-209ENST00000616395 C21orf33P30042 268 aaPredicted RBP15.12■□□□□ 0.01
TRAPPC3-209ENST00000616395 SLC35A1P78382 337 aa15.12■□□□□ 0.01
TRAPPC3-209ENST00000616395 FOXL1Q12952 345 aa15.12■□□□□ 0.01
TRAPPC3-209ENST00000616395 KRR1Q13601 381 aaKnown RBP15.12■□□□□ 0.01
TRAPPC3-209ENST00000616395 CRMP1Q14194 572 aa15.12■□□□□ 0.01
TRAPPC3-209ENST00000616395 FAHD2BQ6P2I3 314 aaPredicted RBP15.12■□□□□ 0.01
TRAPPC3-209ENST00000616395 DNM1P34Q6PK57 102 aa15.12■□□□□ 0.01
TRAPPC3-209ENST00000616395 KLHL24Q6TFL4 600 aa15.12■□□□□ 0.01
TRAPPC3-209ENST00000616395 ZDHHC22Q8N966 263 aa15.12■□□□□ 0.01
TRAPPC3-209ENST00000616395 OR52I1Q8NGK6 324 aa15.12■□□□□ 0.01
TRAPPC3-209ENST00000616395 OR4K13Q8NH42 304 aa15.12■□□□□ 0.01
TRAPPC3-209ENST00000616395 MOSPD2Q8NHP6 518 aa15.12■□□□□ 0.01
TRAPPC3-209ENST00000616395 LGALS12Q96DT0 336 aa15.12■□□□□ 0.01
TRAPPC3-209ENST00000616395 FAHD2AQ96GK7 314 aa15.12■□□□□ 0.01
TRAPPC3-209ENST00000616395 KCNS3Q9BQ31 491 aa15.12■□□□□ 0.01
TRAPPC3-209ENST00000616395 NARFLQ9H6Q4 476 aa15.12■□□□□ 0.01
TRAPPC3-209ENST00000616395 UPB1Q9UBR1 384 aa15.12■□□□□ 0.01
TRAPPC3-209ENST00000616395 EXOGQ9Y2C4 368 aaKnown RBP15.12■□□□□ 0.01
TRAPPC3-209ENST00000616395 CEPT1Q9Y6K0 416 aa15.12■□□□□ 0.01
TRAPPC3-209ENST00000616395 LOC105371242A0A075B767 164 aa15.11■□□□□ 0.01
TRAPPC3-209ENST00000616395 NPIPB13A6NJU9 1138 aa15.11■□□□□ 0.01
TRAPPC3-209ENST00000616395 LIPT2A6NK58 231 aa15.11■□□□□ 0.01
TRAPPC3-209ENST00000616395 NPIPB4C9JG80 1138 aa15.11■□□□□ 0.01
TRAPPC3-209ENST00000616395 CRYAAP02489 173 aa15.11■□□□□ 0.01
TRAPPC3-209ENST00000616395 NR2C1P13056 603 aa15.11■□□□□ 0.01
TRAPPC3-209ENST00000616395 MAP2K4P45985 399 aa15.11■□□□□ 0.01
TRAPPC3-209ENST00000616395 SLC25A1P53007 311 aa15.11■□□□□ 0.01
TRAPPC3-209ENST00000616395 RPL27P61353 136 aaKnown RBP15.11■□□□□ 0.01
TRAPPC3-209ENST00000616395 TGFBR3Q03167 851 aa15.11■□□□□ 0.01
TRAPPC3-209ENST00000616395 PUDPQ08623 228 aa15.11■□□□□ 0.01
TRAPPC3-209ENST00000616395 IRF3Q14653 427 aa15.11■□□□□ 0.01
TRAPPC3-209ENST00000616395 HIKESHIQ53FT3 197 aa15.11■□□□□ 0.01
TRAPPC3-209ENST00000616395 C1QTNF12Q5T7M4 302 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms