RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 B3GALT5Q9Y2C3 310 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 TBC1D3BA6NDS4 549 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 CFDP00746 253 aaPredicted RBP4.54□□□□□ -1.68
VPS13D-213ENST00000613099 DUSP1P28562 367 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 IL2RGP31785 369 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 ANKRD39Q53RE8 183 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 TBC1D3GQ6DHY5 549 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 CDC42EP5Q6NZY7 148 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 TFGQ92734 400 aaPredicted RBP4.54□□□□□ -1.68
VPS13D-213ENST00000613099 RERGQ96A58 199 aaPredicted RBP4.54□□□□□ -1.68
VPS13D-213ENST00000613099 TRMT61AQ96FX7 289 aaKnown RBP4.54□□□□□ -1.68
VPS13D-213ENST00000613099 NRIP2Q9BQI9 281 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 CHTOPQ9Y3Y2 248 aaKnown RBP4.54□□□□□ -1.68
VPS13D-213ENST00000613099 TTC3P53804 2025 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 CD300LBA8K4G0 201 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 SCGB1A1P11684 91 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 GABRA4P48169 554 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 SUSD1Q6UWL2 747 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 TMIGD1Q6UXZ0 262 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 CLEC20AQ6ZU45 233 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 OR1P1Q8NH06 330 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 KHSRPQ92945 711 aaKnown RBP eCLIP4.54□□□□□ -1.681e-6■■■□□ 16.4
VPS13D-213ENST00000613099 ZNF48Q96MX3 618 aaPredicted RBP4.54□□□□□ -1.68
VPS13D-213ENST00000613099 ACER3Q9NUN7 267 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 LHX6Q9UPM6 363 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 SLC16A7O60669 478 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 HPRT1P00492 218 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 BRS3P32247 399 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 NPBWR1P48145 328 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 CKS1BP61024 79 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 TAS1R3Q7RTX0 852 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 OR4C15Q8NGM1 316 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 UBXN10Q96LJ8 280 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 ZBP1Q9H171 429 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 TMEFF2Q9UIK5 374 aaPredicted RBP4.53□□□□□ -1.68
VPS13D-213ENST00000613099 ALG1L2C9J202 215 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 C17orf112F2Z3M2 114 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 PPP6CO00743 305 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 SMPD2O60906 423 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 CLDN11O75508 207 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 IGHV2-70P01814 119 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 SCGB1C2P0DMR2 95 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 GNB3P16520 340 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 GPX4P36969 197 aaPredicted RBP4.53□□□□□ -1.68
VPS13D-213ENST00000613099 CDKN1BP46527 198 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 PRICKLE2Q7Z3G6 844 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 OR52E2Q8NGJ4 325 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 OR5AK3PQ8NH89 298 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 ADAMTS17Q8TE56 1095 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 ANKRD9Q96BM1 317 aaPredicted RBP4.53□□□□□ -1.68
VPS13D-213ENST00000613099 FGF20Q9NP95 211 aaPredicted RBP4.53□□□□□ -1.68
VPS13D-213ENST00000613099 GPANK1O95872 356 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 MUC1P15941 1255 aaPredicted RBP4.53□□□□□ -1.68
VPS13D-213ENST00000613099 AADACP22760 399 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 SERTAD2Q14140 314 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 KHDC3LQ587J8 217 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 TMEM268Q5VZI3 342 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 ABHD15Q6UXT9 468 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 NYNRINQ9P2P1 1898 aaKnown RBP4.53□□□□□ -1.68
VPS13D-213ENST00000613099 CACNA1IQ9P0X4 2223 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 CHD3Q12873 2000 aaKnown RBP4.53□□□□□ -1.68
VPS13D-213ENST00000613099 KLRG2A4D1S0 409 aaPredicted RBP4.53□□□□□ -1.68
VPS13D-213ENST00000613099 CTSAP10619 480 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 NT5EP21589 574 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 NPY4RP50391 375 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 C1QL4Q86Z23 238 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 OR13G1Q8NGZ3 307 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 PIK3IP1Q96FE7 263 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 ADGRG7Q96K78 797 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 UTS2RQ9UKP6 389 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 OR51B4Q9Y5P0 310 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 PCM1Q15154 2024 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 ZFP92A6NM28 416 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 GAPDHP04406 335 aaKnown RBP4.53□□□□□ -1.68
VPS13D-213ENST00000613099 NTF3P20783 257 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 GPR4P46093 362 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 AGFG1P52594 562 aaKnown RBP4.53□□□□□ -1.68
VPS13D-213ENST00000613099 PMCHL1Q16048 86 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 CDC20BQ86Y33 519 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 SUMF1Q8NBK3 374 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 ALG12Q9BV10 488 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 KLHL13Q9P2N7 655 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 PEF1Q9UBV8 284 aaKnown RBP4.53□□□□□ -1.68
VPS13D-213ENST00000613099 CHST2Q9Y4C5 530 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 GPX2P18283 190 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 ATF1P18846 271 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 GLYATL3Q5SZD4 288 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 ZNF573Q86YE8 665 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 TMEM123Q8N131 208 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 OR2L13Q8N349 312 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 MOB3AQ96BX8 217 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 OR52D1Q9H346 318 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 KLK14Q9P0G3 267 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 PRSS50Q9UI38 385 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 MKRN2OSH3BPM6 223 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 K7EQM0 130 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 PQBP1O60828 265 aaKnown RBP4.53□□□□□ -1.68
VPS13D-213ENST00000613099 DUS4LO95620 317 aaKnown RBP4.53□□□□□ -1.68
VPS13D-213ENST00000613099 WNT1P04628 370 aa4.53□□□□□ -1.68
VPS13D-213ENST00000613099 OR8G3PP0DMU2 310 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms