RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 OR6C65A6NJZ3 312 aa9.79□□□□□ -0.84
FAM3A-221ENST00000612856 K7ESF4 209 aa9.79□□□□□ -0.84
FAM3A-221ENST00000612856 CRYBA1P05813 215 aa9.79□□□□□ -0.84
FAM3A-221ENST00000612856 S100A2P29034 98 aa9.79□□□□□ -0.84
FAM3A-221ENST00000612856 CLDN15P56746 228 aa9.79□□□□□ -0.84
FAM3A-221ENST00000612856 DCAF7P61962 342 aa9.79□□□□□ -0.84
FAM3A-221ENST00000612856 TPBGQ13641 420 aa9.79□□□□□ -0.84
FAM3A-221ENST00000612856 MSANTD1Q6ZTZ1 278 aa9.79□□□□□ -0.84
FAM3A-221ENST00000612856 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.79□□□□□ -0.84
FAM3A-221ENST00000612856 TMEM99Q8N816 258 aa9.79□□□□□ -0.84
FAM3A-221ENST00000612856 YIPF5Q969M3 257 aa9.79□□□□□ -0.84
FAM3A-221ENST00000612856 LRFN3Q9BTN0 628 aa9.79□□□□□ -0.84
FAM3A-221ENST00000612856 C20orf24Q9BUV8 137 aa9.79□□□□□ -0.84
FAM3A-221ENST00000612856 JAM3Q9BX67 310 aa9.79□□□□□ -0.84
FAM3A-221ENST00000612856 PLA2G12AQ9BZM1 189 aa9.79□□□□□ -0.84
FAM3A-221ENST00000612856 CDH20Q9HBT6 801 aa9.79□□□□□ -0.84
FAM3A-221ENST00000612856 NDRG3Q9UGV2 375 aa9.79□□□□□ -0.84
FAM3A-221ENST00000612856 GPR55Q9Y2T6 319 aaPredicted RBP9.79□□□□□ -0.84
FAM3A-221ENST00000612856 A0A1W2PR77 199 aa9.79□□□□□ -0.84
FAM3A-221ENST00000612856 SHISA3A0PJX4 238 aa9.79□□□□□ -0.84
FAM3A-221ENST00000612856 SNRNP70P08621 437 aaKnown RBP9.79□□□□□ -0.84
FAM3A-221ENST00000612856 PDZD11Q5EBL8 140 aa9.79□□□□□ -0.84
FAM3A-221ENST00000612856 C1QL3Q5VWW1 255 aa9.79□□□□□ -0.84
FAM3A-221ENST00000612856 KIRREL2Q6UWL6 708 aa9.79□□□□□ -0.84
FAM3A-221ENST00000612856 ZNF704Q6ZNC4 412 aaPredicted RBP9.79□□□□□ -0.84
FAM3A-221ENST00000612856 SLC16A14Q7RTX9 510 aa9.79□□□□□ -0.84
FAM3A-221ENST00000612856 ABHD12BQ7Z5M8 362 aaPredicted RBP9.79□□□□□ -0.84
FAM3A-221ENST00000612856 DNASE2BQ8WZ79 361 aa9.79□□□□□ -0.84
FAM3A-221ENST00000612856 C4orf36Q96KX1 117 aa9.79□□□□□ -0.84
FAM3A-221ENST00000612856 SLC19A3Q9BZV2 496 aa9.79□□□□□ -0.84
FAM3A-221ENST00000612856 CRLF2Q9HC73 371 aa9.79□□□□□ -0.84
FAM3A-221ENST00000612856 CYSLTR2Q9NS75 346 aa9.79□□□□□ -0.84
FAM3A-221ENST00000612856 KLHL9Q9P2J3 617 aa9.79□□□□□ -0.84
FAM3A-221ENST00000612856 CCSO14618 274 aa9.79□□□□□ -0.84
FAM3A-221ENST00000612856 FOXS1O43638 330 aa9.79□□□□□ -0.84
FAM3A-221ENST00000612856 LIMS3P0CW19 117 aa9.79□□□□□ -0.84
FAM3A-221ENST00000612856 LIMS4P0CW20 117 aa9.79□□□□□ -0.84
FAM3A-221ENST00000612856 NQO2P16083 231 aa9.79□□□□□ -0.84
FAM3A-221ENST00000612856 SLC6A8P48029 635 aa9.79□□□□□ -0.84
FAM3A-221ENST00000612856 FOXF1Q12946 379 aa9.79□□□□□ -0.84
FAM3A-221ENST00000612856 IL11RAQ14626 422 aa9.79□□□□□ -0.84
FAM3A-221ENST00000612856 HFEQ30201 348 aa9.79□□□□□ -0.84
FAM3A-221ENST00000612856 YOD1Q5VVQ6 348 aaPredicted RBP9.79□□□□□ -0.84
FAM3A-221ENST00000612856 RHBDD2Q6NTF9 364 aa9.79□□□□□ -0.84
FAM3A-221ENST00000612856 ARHGAP11AQ6P4F7 1023 aa9.79□□□□□ -0.84
FAM3A-221ENST00000612856 PLXDC2Q6UX71 529 aa9.79□□□□□ -0.84
FAM3A-221ENST00000612856 ZNF813Q6ZN06 617 aa9.79□□□□□ -0.84
FAM3A-221ENST00000612856 PRR7Q8TB68 274 aa9.79□□□□□ -0.84
FAM3A-221ENST00000612856 EXTL1Q92935 676 aa9.79□□□□□ -0.84
FAM3A-221ENST00000612856 SSX3Q99909 188 aa9.79□□□□□ -0.84
FAM3A-221ENST00000612856 DUSP22Q9NRW4 184 aa9.79□□□□□ -0.84
FAM3A-221ENST00000612856 MYO9AB2RTY4 2548 aa9.79□□□□□ -0.84
FAM3A-221ENST00000612856 OR6C68A6NDL8 312 aa9.78□□□□□ -0.84
FAM3A-221ENST00000612856 ZNF878C9JN71 531 aa9.78□□□□□ -0.84
FAM3A-221ENST00000612856 TNFSF11O14788 317 aa9.78□□□□□ -0.84
FAM3A-221ENST00000612856 RBBP9O75884 186 aa9.78□□□□□ -0.84
FAM3A-221ENST00000612856 DCTDP32321 178 aa9.78□□□□□ -0.84
FAM3A-221ENST00000612856 IDH3GP51553 393 aaPredicted RBP9.78□□□□□ -0.84
FAM3A-221ENST00000612856 GLO1Q04760 184 aa9.78□□□□□ -0.84
FAM3A-221ENST00000612856 DYRK1AQ13627 763 aa9.78□□□□□ -0.84
FAM3A-221ENST00000612856 SSX2Q16385 188 aa9.78□□□□□ -0.84
FAM3A-221ENST00000612856 GUCA2BQ16661 112 aa9.78□□□□□ -0.84
FAM3A-221ENST00000612856 RGS7BPQ6MZT1 257 aaPredicted RBP9.78□□□□□ -0.84
FAM3A-221ENST00000612856 DGAT2L6Q6ZPD8 337 aa9.78□□□□□ -0.84
FAM3A-221ENST00000612856 OR9K2Q8NGE7 335 aa9.78□□□□□ -0.84
FAM3A-221ENST00000612856 DVL3Q92997 716 aaPredicted RBP9.78□□□□□ -0.84
FAM3A-221ENST00000612856 MVB12AQ96EY5 273 aa9.78□□□□□ -0.84
FAM3A-221ENST00000612856 NKX3-1Q99801 234 aaPredicted RBP9.78□□□□□ -0.84
FAM3A-221ENST00000612856 KIF26BQ2KJY2 2108 aa9.78□□□□□ -0.84
FAM3A-221ENST00000612856 FAM230AA0A1W2PPH8 454 aa9.78□□□□□ -0.84
FAM3A-221ENST00000612856 HSPB6O14558 160 aa9.78□□□□□ -0.84
FAM3A-221ENST00000612856 UBL3O95164 117 aa9.78□□□□□ -0.84
FAM3A-221ENST00000612856 RNF224P0DH78 156 aa9.78□□□□□ -0.84
FAM3A-221ENST00000612856 TOMM34Q15785 309 aaPredicted RBP9.78□□□□□ -0.84
FAM3A-221ENST00000612856 C1orf140Q5VVS0 124 aa9.78□□□□□ -0.84
FAM3A-221ENST00000612856 SEZ6L2Q6UXD5 910 aa9.78□□□□□ -0.84
FAM3A-221ENST00000612856 SLC38A9Q8NBW4 561 aa9.78□□□□□ -0.84
FAM3A-221ENST00000612856 SFXN5Q8TD22 340 aa9.78□□□□□ -0.84
FAM3A-221ENST00000612856 CD300LFQ8TDQ1 290 aa9.78□□□□□ -0.84
FAM3A-221ENST00000612856 TCTEX1D2Q8WW35 142 aa9.78□□□□□ -0.84
FAM3A-221ENST00000612856 GHSRQ92847 366 aa9.78□□□□□ -0.84
FAM3A-221ENST00000612856 CNTNAP3BQ96NU0 1288 aa9.78□□□□□ -0.84
FAM3A-221ENST00000612856 SCNM1Q9BWG6 230 aa9.78□□□□□ -0.84
FAM3A-221ENST00000612856 SLC38A1Q9H2H9 487 aa9.78□□□□□ -0.84
FAM3A-221ENST00000612856 PARPBPQ9NWS1 579 aa9.78□□□□□ -0.84
FAM3A-221ENST00000612856 SLCO1C1Q9NYB5 712 aa9.78□□□□□ -0.84
FAM3A-221ENST00000612856 MYOTQ9UBF9 498 aa9.78□□□□□ -0.84
FAM3A-221ENST00000612856 BLACEA4D250 179 aa9.78□□□□□ -0.84
FAM3A-221ENST00000612856 PMS2P1A4D2B8 440 aa9.78□□□□□ -0.84
FAM3A-221ENST00000612856 ACOD1A6NK06 481 aa9.78□□□□□ -0.84
FAM3A-221ENST00000612856 SULT1C2O00338 296 aa9.78□□□□□ -0.84
FAM3A-221ENST00000612856 ZNF208O43345 1280 aa9.78□□□□□ -0.84
FAM3A-221ENST00000612856 EIF3GO75821 320 aaKnown RBP eCLIP9.78□□□□□ -0.84
FAM3A-221ENST00000612856 ARL6IP5O75915 188 aa9.78□□□□□ -0.84
FAM3A-221ENST00000612856 HTR3BO95264 441 aa9.78□□□□□ -0.84
FAM3A-221ENST00000612856 SULT1A3P0DMM9 295 aa9.78□□□□□ -0.84
FAM3A-221ENST00000612856 SULT1A4P0DMN0 295 aa9.78□□□□□ -0.84
FAM3A-221ENST00000612856 ZNF16P17020 682 aaPredicted RBP9.78□□□□□ -0.84
FAM3A-221ENST00000612856 CSNK2A1P68400 391 aaPredicted RBP9.78□□□□□ -0.84
FAM3A-221ENST00000612856 EIF2S3LQ2VIR3 472 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms