RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 TAF13Q15543 124 aa10.54□□□□□ -0.72
CBWD3-208ENST00000612050 MSMPQ1L6U9 139 aa10.54□□□□□ -0.72
CBWD3-208ENST00000612050 ZNF770Q6IQ21 691 aaPredicted RBP10.54□□□□□ -0.72
CBWD3-208ENST00000612050 ATG16L2Q8NAA4 619 aa10.54□□□□□ -0.72
CBWD3-208ENST00000612050 DNAJC9Q8WXX5 260 aa10.54□□□□□ -0.72
CBWD3-208ENST00000612050 RAB1CQ92928 201 aa10.54□□□□□ -0.72
CBWD3-208ENST00000612050 PTP4A1Q93096 173 aa10.54□□□□□ -0.72
CBWD3-208ENST00000612050 FEVQ99581 238 aa10.54□□□□□ -0.72
CBWD3-208ENST00000612050 BEX2Q9BXY8 128 aa10.54□□□□□ -0.72
CBWD3-208ENST00000612050 PRRG3Q9BZD7 231 aa10.54□□□□□ -0.72
CBWD3-208ENST00000612050 SHARPINQ9H0F6 387 aa10.54□□□□□ -0.72
CBWD3-208ENST00000612050 FN3KQ9H479 309 aa10.54□□□□□ -0.72
CBWD3-208ENST00000612050 DNAJB9Q9UBS3 223 aa10.54□□□□□ -0.72
CBWD3-208ENST00000612050 IGHV4-61A0A0C4DH41 118 aa10.53□□□□□ -0.72
CBWD3-208ENST00000612050 GSC2O15499 205 aa10.53□□□□□ -0.72
CBWD3-208ENST00000612050 LMX1BO60663 402 aa10.53□□□□□ -0.72
CBWD3-208ENST00000612050 CDC14BO60729 498 aa10.53□□□□□ -0.72
CBWD3-208ENST00000612050 FKBP6O75344 327 aa10.53□□□□□ -0.72
CBWD3-208ENST00000612050 CRLF1O75462 422 aa10.53□□□□□ -0.72
CBWD3-208ENST00000612050 TGFAP01135 160 aa10.53□□□□□ -0.72
CBWD3-208ENST00000612050 NGFP01138 241 aa10.53□□□□□ -0.72
CBWD3-208ENST00000612050 TFP02787 698 aa10.53□□□□□ -0.72
CBWD3-208ENST00000612050 TACSTD2P09758 323 aa10.53□□□□□ -0.72
CBWD3-208ENST00000612050 IGHV4-31P0DP07 118 aa10.53□□□□□ -0.72
CBWD3-208ENST00000612050 ANPEPP15144 967 aa10.53□□□□□ -0.72
CBWD3-208ENST00000612050 ZNF16P17020 682 aaPredicted RBP10.53□□□□□ -0.72
CBWD3-208ENST00000612050 POU1F1P28069 291 aa10.53□□□□□ -0.72
CBWD3-208ENST00000612050 GRK5P34947 590 aa10.53□□□□□ -0.72
CBWD3-208ENST00000612050 CRYBB2P43320 205 aa10.53□□□□□ -0.72
CBWD3-208ENST00000612050 MAGEB1P43366 347 aa10.53□□□□□ -0.72
CBWD3-208ENST00000612050 RIN1Q13671 783 aa10.53□□□□□ -0.72
CBWD3-208ENST00000612050 MEP1BQ16820 701 aa10.53□□□□□ -0.72
CBWD3-208ENST00000612050 CCDC92Q53HC0 331 aaPredicted RBP10.53□□□□□ -0.72
CBWD3-208ENST00000612050 SLC27A4Q6P1M0 643 aa10.53□□□□□ -0.72
CBWD3-208ENST00000612050 CD300LDQ6UXZ3 194 aa10.53□□□□□ -0.72
CBWD3-208ENST00000612050 USP51Q70EK9 711 aa10.53□□□□□ -0.72
CBWD3-208ENST00000612050 LINC00346Q8IVM7 164 aa10.53□□□□□ -0.72
CBWD3-208ENST00000612050 CYB561A3Q8NBI2 242 aa10.53□□□□□ -0.72
CBWD3-208ENST00000612050 SLC37A3Q8NCC5 494 aa10.53□□□□□ -0.72
CBWD3-208ENST00000612050 OR6K6Q8NGW6 343 aa10.53□□□□□ -0.72
CBWD3-208ENST00000612050 SLC7A6OSQ96CW6 309 aaPredicted RBP10.53□□□□□ -0.72
CBWD3-208ENST00000612050 RAB39BQ96DA2 213 aa10.53□□□□□ -0.72
CBWD3-208ENST00000612050 ZNF275Q9NSD4 429 aaPredicted RBP10.53□□□□□ -0.72
CBWD3-208ENST00000612050 ARMC1Q9NVT9 282 aa10.53□□□□□ -0.72
CBWD3-208ENST00000612050 TMEM160Q9NX00 188 aa10.53□□□□□ -0.72
CBWD3-208ENST00000612050 NOP16Q9Y3C1 178 aaKnown RBP10.53□□□□□ -0.72
CBWD3-208ENST00000612050 LHFPL6Q9Y693 200 aa10.53□□□□□ -0.72
CBWD3-208ENST00000612050 CHD3Q12873 2000 aaKnown RBP10.53□□□□□ -0.72
CBWD3-208ENST00000612050 HIVEP2P31629 2446 aa10.53□□□□□ -0.72
CBWD3-208ENST00000612050 A0A096LNT2 108 aa10.52□□□□□ -0.73
CBWD3-208ENST00000612050 F5H5K5 113 aa10.52□□□□□ -0.73
CBWD3-208ENST00000612050 LYNX1G3V0Z9 82 aa10.52□□□□□ -0.73
CBWD3-208ENST00000612050 DCTN6O00399 190 aa10.52□□□□□ -0.73
CBWD3-208ENST00000612050 HMGN1P05114 100 aa10.52□□□□□ -0.73
CBWD3-208ENST00000612050 SPARCP09486 303 aa10.52□□□□□ -0.73
CBWD3-208ENST00000612050 LYNX1P0DP58 116 aa10.52□□□□□ -0.73
CBWD3-208ENST00000612050 RAC2P15153 192 aa10.52□□□□□ -0.73
CBWD3-208ENST00000612050 MPV17P39210 176 aa10.52□□□□□ -0.73
CBWD3-208ENST00000612050 SLC15A1P46059 708 aa10.52□□□□□ -0.73
CBWD3-208ENST00000612050 SLC6A9P48067 706 aa10.52□□□□□ -0.73
CBWD3-208ENST00000612050 SLC25A1P53007 311 aa10.52□□□□□ -0.73
CBWD3-208ENST00000612050 RAD23AP54725 363 aa10.52□□□□□ -0.73
CBWD3-208ENST00000612050 TNFAIP6P98066 277 aaPredicted RBP10.52□□□□□ -0.73
CBWD3-208ENST00000612050 C1orf146Q5VVC0 180 aa10.52□□□□□ -0.73
CBWD3-208ENST00000612050 SLC18B1Q6NT16 456 aa10.52□□□□□ -0.73
CBWD3-208ENST00000612050 CORO6Q6QEF8 472 aa10.52□□□□□ -0.73
CBWD3-208ENST00000612050 HIPK1Q86Z02 1210 aa10.52□□□□□ -0.73
CBWD3-208ENST00000612050 LINC01356Q8N9X3 169 aa10.52□□□□□ -0.73
CBWD3-208ENST00000612050 OR9Q1Q8NGQ5 310 aa10.52□□□□□ -0.73
CBWD3-208ENST00000612050 CMBLQ96DG6 245 aa10.52□□□□□ -0.73
CBWD3-208ENST00000612050 ZNF582Q96NG8 517 aaPredicted RBP10.52□□□□□ -0.73
CBWD3-208ENST00000612050 PLA2G12AQ9BZM1 189 aa10.52□□□□□ -0.73
CBWD3-208ENST00000612050 SP140LQ9H930 580 aa10.52□□□□□ -0.73
CBWD3-208ENST00000612050 CMC2Q9NRP2 79 aa10.52□□□□□ -0.73
CBWD3-208ENST00000612050 PTTG3PQ9NZH4 202 aa10.52□□□□□ -0.73
CBWD3-208ENST00000612050 CYB5R1Q9UHQ9 305 aa10.52□□□□□ -0.73
CBWD3-208ENST00000612050 ENOPH1Q9UHY7 261 aa10.52□□□□□ -0.73
CBWD3-208ENST00000612050 PURGQ9UJV8 347 aaKnown RBP10.52□□□□□ -0.73
CBWD3-208ENST00000612050 TCRBV3S1A0A5B6 114 aa10.51□□□□□ -0.73
CBWD3-208ENST00000612050 LRP5LA4QPB2 252 aa10.51□□□□□ -0.73
CBWD3-208ENST00000612050 PRR23D1E9PI22 279 aaPredicted RBP10.51□□□□□ -0.73
CBWD3-208ENST00000612050 GPANK1O95872 356 aa10.51□□□□□ -0.73
CBWD3-208ENST00000612050 IGHV1-46P01743 117 aa10.51□□□□□ -0.73
CBWD3-208ENST00000612050 APOC1P02654 83 aa10.51□□□□□ -0.73
CBWD3-208ENST00000612050 LCATP04180 440 aa10.51□□□□□ -0.73
CBWD3-208ENST00000612050 IGFBP1P08833 259 aaPredicted RBP10.51□□□□□ -0.73
CBWD3-208ENST00000612050 PRR23D2P0DMB1 279 aaPredicted RBP10.51□□□□□ -0.73
CBWD3-208ENST00000612050 FCGR1AP12314 374 aa10.51□□□□□ -0.73
CBWD3-208ENST00000612050 OSMP13725 252 aa10.51□□□□□ -0.73
CBWD3-208ENST00000612050 KITLGP21583 273 aa10.51□□□□□ -0.73
CBWD3-208ENST00000612050 COL8A2P25067 703 aa10.51□□□□□ -0.73
CBWD3-208ENST00000612050 PYCR1P32322 319 aa10.51□□□□□ -0.73
CBWD3-208ENST00000612050 ENTPD1P49961 510 aa10.51□□□□□ -0.73
CBWD3-208ENST00000612050 MMP15P51511 669 aa10.51□□□□□ -0.73
CBWD3-208ENST00000612050 HIST1H3AP68431 136 aa10.51□□□□□ -0.73
CBWD3-208ENST00000612050 KRTAP1-1Q07627 177 aa10.51□□□□□ -0.73
CBWD3-208ENST00000612050 PSG7Q13046 419 aa10.51□□□□□ -0.73
CBWD3-208ENST00000612050 CRMP1Q14194 572 aa10.51□□□□□ -0.73
CBWD3-208ENST00000612050 HIST2H3PS2Q5TEC6 136 aa10.51□□□□□ -0.73
CBWD3-208ENST00000612050 HIST2H3AQ71DI3 136 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms