RNA–Protein interactions for RNA: ENST00000611457.4

CBWD1-219, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 3,324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-219ENST00000611457 SPSB4Q96A44 273 aa6.23□□□□□ -1.41
CBWD1-219ENST00000611457 PHF21AQ96BD5 680 aa6.23□□□□□ -1.41
CBWD1-219ENST00000611457 ZG16BQ96DA0 208 aa6.23□□□□□ -1.41
CBWD1-219ENST00000611457 SLC25A44Q96H78 314 aaPredicted RBP6.23□□□□□ -1.41
CBWD1-219ENST00000611457 MNTQ99583 582 aa6.23□□□□□ -1.41
CBWD1-219ENST00000611457 ACTR6Q9GZN1 396 aa6.23□□□□□ -1.41
CBWD1-219ENST00000611457 TLNRD1Q9H1K6 362 aa6.23□□□□□ -1.41
CBWD1-219ENST00000611457 TMEM38BQ9NVV0 291 aa6.23□□□□□ -1.41
CBWD1-219ENST00000611457 RDH8Q9NYR8 311 aa6.23□□□□□ -1.41
CBWD1-219ENST00000611457 ENOPH1Q9UHY7 261 aa6.23□□□□□ -1.41
CBWD1-219ENST00000611457 ADAM30Q9UKF2 790 aa6.23□□□□□ -1.41
CBWD1-219ENST00000611457 DIMT1Q9UNQ2 313 aaKnown RBP6.23□□□□□ -1.41
CBWD1-219ENST00000611457 FKBP7Q9Y680 259 aa6.23□□□□□ -1.41
CBWD1-219ENST00000611457 A0A0A6YYJ9 748 aa6.23□□□□□ -1.41
CBWD1-219ENST00000611457 A0A1W2PPR1 153 aa6.23□□□□□ -1.41
CBWD1-219ENST00000611457 OR6C6A6NF89 314 aa6.23□□□□□ -1.41
CBWD1-219ENST00000611457 TLX2O43763 284 aaPredicted RBP6.23□□□□□ -1.41
CBWD1-219ENST00000611457 CXCR1P25024 350 aa6.23□□□□□ -1.41
CBWD1-219ENST00000611457 PTBP1P26599 531 aaKnown RBP eCLIP6.23□□□□□ -1.41
CBWD1-219ENST00000611457 PUDPQ08623 228 aa6.23□□□□□ -1.41
CBWD1-219ENST00000611457 ST3GAL4Q11206 333 aa6.23□□□□□ -1.41
CBWD1-219ENST00000611457 COX10Q12887 443 aa6.23□□□□□ -1.41
CBWD1-219ENST00000611457 FOXD4Q12950 439 aaPredicted RBP6.23□□□□□ -1.41
CBWD1-219ENST00000611457 BTN1A1Q13410 526 aa6.23□□□□□ -1.41
CBWD1-219ENST00000611457 IFI44LQ53G44 452 aa6.23□□□□□ -1.41
CBWD1-219ENST00000611457 DDI2Q5TDH0 399 aa6.23□□□□□ -1.41
CBWD1-219ENST00000611457 C9orf139Q6ZV77 190 aa6.23□□□□□ -1.41
CBWD1-219ENST00000611457 GPAT4Q86UL3 456 aa6.23□□□□□ -1.41
CBWD1-219ENST00000611457 TUSC5Q8IXB3 177 aa6.23□□□□□ -1.41
CBWD1-219ENST00000611457 SLC37A3Q8NCC5 494 aa6.23□□□□□ -1.41
CBWD1-219ENST00000611457 GGHQ92820 318 aa6.23□□□□□ -1.41
CBWD1-219ENST00000611457 QRSL1Q9H0R6 528 aaKnown RBP6.23□□□□□ -1.41
CBWD1-219ENST00000611457 KRCC1Q9NPI7 259 aaPredicted RBP6.23□□□□□ -1.41
CBWD1-219ENST00000611457 MEPEQ9NQ76 525 aaPredicted RBP6.23□□□□□ -1.41
CBWD1-219ENST00000611457 PCDHB16Q9NRJ7 776 aa6.23□□□□□ -1.41
CBWD1-219ENST00000611457 RBFOX1Q9NWB1 397 aaKnown RBP6.23□□□□□ -1.41
CBWD1-219ENST00000611457 MCUBQ9NWR8 336 aa6.23□□□□□ -1.41
CBWD1-219ENST00000611457 IMPAD1Q9NX62 359 aa6.23□□□□□ -1.41
CBWD1-219ENST00000611457 UPB1Q9UBR1 384 aa6.23□□□□□ -1.41
CBWD1-219ENST00000611457 ATRXP46100 2492 aa6.23□□□□□ -1.41
CBWD1-219ENST00000611457 IQCMA0A1B0GVH7 501 aa6.22□□□□□ -1.41
CBWD1-219ENST00000611457 MPZL2O60487 215 aa6.22□□□□□ -1.41
CBWD1-219ENST00000611457 TRAPPC6AO75865 159 aa6.22□□□□□ -1.41
CBWD1-219ENST00000611457 HMGN1P05114 100 aa6.22□□□□□ -1.41
CBWD1-219ENST00000611457 FABP3P05413 133 aa6.22□□□□□ -1.41
CBWD1-219ENST00000611457 RRASP10301 218 aa6.22□□□□□ -1.41
CBWD1-219ENST00000611457 RAB3AP20336 220 aa6.22□□□□□ -1.41
CBWD1-219ENST00000611457 C4BPBP20851 252 aa6.22□□□□□ -1.41
CBWD1-219ENST00000611457 CD40P25942 277 aa6.22□□□□□ -1.41
CBWD1-219ENST00000611457 ZNF79Q15937 498 aa6.22□□□□□ -1.41
CBWD1-219ENST00000611457 TSTQ16762 297 aaKnown RBP6.22□□□□□ -1.41
CBWD1-219ENST00000611457 GTDC1Q4AE62 458 aa6.22□□□□□ -1.41
CBWD1-219ENST00000611457 CCDC71Q8IV32 467 aaPredicted RBP6.22□□□□□ -1.41
CBWD1-219ENST00000611457 LAX1Q8IWV1 398 aa6.22□□□□□ -1.41
CBWD1-219ENST00000611457 UBE2J2Q8N2K1 259 aa6.22□□□□□ -1.41
CBWD1-219ENST00000611457 C9orf62Q8N4C0 152 aa6.22□□□□□ -1.41
CBWD1-219ENST00000611457 DUSP18Q8NEJ0 188 aa6.22□□□□□ -1.41
CBWD1-219ENST00000611457 RBPMSQ93062 196 aaKnown RBP6.22□□□□□ -1.41
CBWD1-219ENST00000611457 ERGIC1Q969X5 290 aa6.22□□□□□ -1.41
CBWD1-219ENST00000611457 ZC3HAV1LQ96H79 300 aaKnown RBP6.22□□□□□ -1.41
CBWD1-219ENST00000611457 AMBNQ9NP70 447 aa6.22□□□□□ -1.41
CBWD1-219ENST00000611457 SNTG1Q9NSN8 517 aa6.22□□□□□ -1.41
CBWD1-219ENST00000611457 ZNF391Q9UJN7 358 aa6.22□□□□□ -1.41
CBWD1-219ENST00000611457 CACNA1CQ13936 2221 aa6.22□□□□□ -1.41
CBWD1-219ENST00000611457 DSPP15924 2871 aaKnown RBP6.22□□□□□ -1.41
CBWD1-219ENST00000611457 CFAP47Q6ZTR5 3102 aa6.22□□□□□ -1.41
CBWD1-219ENST00000611457 DPRXA6NFQ7 191 aa6.22□□□□□ -1.41
CBWD1-219ENST00000611457 ZNF587BE7ETH6 402 aa6.22□□□□□ -1.41
CBWD1-219ENST00000611457 FFAR1O14842 300 aa6.22□□□□□ -1.41
CBWD1-219ENST00000611457 ADAP00813 363 aa6.22□□□□□ -1.41
CBWD1-219ENST00000611457 TP53P04637 393 aaPredicted RBP6.22□□□□□ -1.41
CBWD1-219ENST00000611457 APOBEC3AP31941 199 aaPredicted RBP6.22□□□□□ -1.41
CBWD1-219ENST00000611457 SOAT1P35610 550 aa6.22□□□□□ -1.41
CBWD1-219ENST00000611457 ARF1P84077 181 aaKnown RBP6.22□□□□□ -1.41
CBWD1-219ENST00000611457 PGGHGQ32M88 737 aa6.22□□□□□ -1.41
CBWD1-219ENST00000611457 TMEM176BQ3YBM2 270 aaPredicted RBP6.22□□□□□ -1.41
CBWD1-219ENST00000611457 TNFAIP8L2Q6P589 184 aaPredicted RBP6.22□□□□□ -1.41
CBWD1-219ENST00000611457 OR5M9Q8NGP3 310 aa6.22□□□□□ -1.41
CBWD1-219ENST00000611457 OR5AK3PQ8NH89 298 aa6.22□□□□□ -1.41
CBWD1-219ENST00000611457 ST8SIA4Q92187 359 aa6.22□□□□□ -1.41
CBWD1-219ENST00000611457 AP3S1Q92572 193 aa6.22□□□□□ -1.41
CBWD1-219ENST00000611457 UBE2FQ969M7 185 aa6.22□□□□□ -1.41
CBWD1-219ENST00000611457 OPN3Q9H1Y3 402 aaPredicted RBP6.22□□□□□ -1.41
CBWD1-219ENST00000611457 SEC14L4Q9UDX3 406 aa6.22□□□□□ -1.41
CBWD1-219ENST00000611457 ZNF346Q9UL40 294 aaKnown RBP6.22□□□□□ -1.41
CBWD1-219ENST00000611457 MGAT4AQ9UM21 535 aa6.22□□□□□ -1.41
CBWD1-219ENST00000611457 STUB1Q9UNE7 303 aa6.22□□□□□ -1.41
CBWD1-219ENST00000611457 SSR3Q9UNL2 185 aa6.22□□□□□ -1.41
CBWD1-219ENST00000611457 NOSIPQ9Y314 301 aaKnown RBP6.22□□□□□ -1.41
CBWD1-219ENST00000611457 MAB21L2Q9Y586 359 aa6.22□□□□□ -1.41
CBWD1-219ENST00000611457 IGHV1-18A0A0C4DH31 117 aa6.22□□□□□ -1.41
CBWD1-219ENST00000611457 CIB4A0PJX0 185 aa6.22□□□□□ -1.41
CBWD1-219ENST00000611457 HLA-DQB1P01920 261 aa6.22□□□□□ -1.41
CBWD1-219ENST00000611457 SLC2A2P11168 524 aaPredicted RBP6.22□□□□□ -1.41
CBWD1-219ENST00000611457 HOXB4P17483 251 aaPredicted RBP6.22□□□□□ -1.41
CBWD1-219ENST00000611457 RPS19P39019 145 aaKnown RBP6.22□□□□□ -1.41
CBWD1-219ENST00000611457 HSF2Q03933 536 aa6.22□□□□□ -1.41
CBWD1-219ENST00000611457 LAPTM4AQ15012 233 aa6.22□□□□□ -1.41
CBWD1-219ENST00000611457 GPR68Q15743 365 aa6.22□□□□□ -1.41
CBWD1-219ENST00000611457 TMEM108Q6UXF1 575 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms