RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 LDLRAD4O15165 306 aa13.15□□□□□ -0.31
CTCFL-219ENST00000608720 TO15178 435 aa13.15□□□□□ -0.31
CTCFL-219ENST00000608720 SPDEFO95238 335 aa13.15□□□□□ -0.31
CTCFL-219ENST00000608720 ZNF735P0CB33 412 aa13.15□□□□□ -0.31
CTCFL-219ENST00000608720 CAPZA1P52907 286 aa13.15□□□□□ -0.31
CTCFL-219ENST00000608720 GLO1Q04760 184 aa13.15□□□□□ -0.31
CTCFL-219ENST00000608720 PMPCAQ10713 525 aa13.15□□□□□ -0.31
CTCFL-219ENST00000608720 ELAVL1Q15717 326 aaKnown RBP13.15□□□□□ -0.31
CTCFL-219ENST00000608720 C1orf140Q5VVS0 124 aa13.15□□□□□ -0.31
CTCFL-219ENST00000608720 LIN54Q6MZP7 749 aa13.15□□□□□ -0.31
CTCFL-219ENST00000608720 PUSL1Q8N0Z8 303 aaKnown RBP13.15□□□□□ -0.31
CTCFL-219ENST00000608720 GALNT16Q8N428 558 aa13.15□□□□□ -0.31
CTCFL-219ENST00000608720 TSLPQ969D9 159 aa13.15□□□□□ -0.31
CTCFL-219ENST00000608720 TGM7Q96PF1 710 aa13.15□□□□□ -0.31
CTCFL-219ENST00000608720 NUDT9Q9BW91 350 aa13.15□□□□□ -0.31
CTCFL-219ENST00000608720 NKX2-4Q9H2Z4 354 aa13.15□□□□□ -0.31
CTCFL-219ENST00000608720 CUTCQ9NTM9 273 aa13.15□□□□□ -0.31
CTCFL-219ENST00000608720 CARHSP1Q9Y2V2 147 aaKnown RBP13.15□□□□□ -0.31
CTCFL-219ENST00000608720 A0A1W2PPC4 97 aa13.14□□□□□ -0.31
CTCFL-219ENST00000608720 TLCD2A6NGC4 264 aa13.14□□□□□ -0.31
CTCFL-219ENST00000608720 ACAA1P09110 424 aaPredicted RBP13.14□□□□□ -0.31
CTCFL-219ENST00000608720 ZNF345Q14585 488 aa13.14□□□□□ -0.31
CTCFL-219ENST00000608720 EBPQ15125 230 aaKnown RBP13.14□□□□□ -0.31
CTCFL-219ENST00000608720 ELOCQ15369 112 aa13.14□□□□□ -0.31
CTCFL-219ENST00000608720 C1orf100Q5SVJ3 147 aa13.14□□□□□ -0.31
CTCFL-219ENST00000608720 AVPI1Q5T686 147 aa13.14□□□□□ -0.31
CTCFL-219ENST00000608720 ATPAF1Q5TC12 328 aaPredicted RBP13.14□□□□□ -0.31
CTCFL-219ENST00000608720 BPIFB2Q8N4F0 458 aa13.14□□□□□ -0.31
CTCFL-219ENST00000608720 OR5M8Q8NGP6 311 aa13.14□□□□□ -0.31
CTCFL-219ENST00000608720 OR13C3Q8NGS6 347 aa13.14□□□□□ -0.31
CTCFL-219ENST00000608720 TCEAL3Q969E4 200 aa13.14□□□□□ -0.31
CTCFL-219ENST00000608720 CMKLR1Q99788 373 aa13.14□□□□□ -0.31
CTCFL-219ENST00000608720 NKX3-1Q99801 234 aaPredicted RBP13.14□□□□□ -0.31
CTCFL-219ENST00000608720 NRSN2Q9GZP1 204 aa13.14□□□□□ -0.31
CTCFL-219ENST00000608720 GSN-AS1Q9NRJ2 163 aa13.14□□□□□ -0.31
CTCFL-219ENST00000608720 CGGBP1Q9UFW8 167 aaPredicted RBP13.14□□□□□ -0.31
CTCFL-219ENST00000608720 MSRAQ9UJ68 235 aa13.14□□□□□ -0.31
CTCFL-219ENST00000608720 CD207Q9UJ71 328 aa13.14□□□□□ -0.31
CTCFL-219ENST00000608720 A0A1B0GTI1 187 aa13.13□□□□□ -0.31
CTCFL-219ENST00000608720 DCDC2BA2VCK2 349 aa13.13□□□□□ -0.31
CTCFL-219ENST00000608720 CDC14CA4D256 554 aa13.13□□□□□ -0.31
CTCFL-219ENST00000608720 OR5H14A6NHG9 310 aa13.13□□□□□ -0.31
CTCFL-219ENST00000608720 TMEM200CA6NKL6 621 aa13.13□□□□□ -0.31
CTCFL-219ENST00000608720 SSX5O60225 188 aa13.13□□□□□ -0.31
CTCFL-219ENST00000608720 EIF1BO60739 113 aaKnown RBP13.13□□□□□ -0.31
CTCFL-219ENST00000608720 SRSF10O75494 262 aaKnown RBP13.13□□□□□ -0.31
CTCFL-219ENST00000608720 EIF3GO75821 320 aaKnown RBP eCLIP13.13□□□□□ -0.31
CTCFL-219ENST00000608720 ISG15P05161 165 aa13.13□□□□□ -0.31
CTCFL-219ENST00000608720 ACHEP22303 614 aa13.13□□□□□ -0.31
CTCFL-219ENST00000608720 EIF1P41567 113 aaKnown RBP13.13□□□□□ -0.31
CTCFL-219ENST00000608720 OR1D4P47884 311 aa13.13□□□□□ -0.31
CTCFL-219ENST00000608720 GFERP55789 205 aa13.13□□□□□ -0.31
CTCFL-219ENST00000608720 PLCXD2Q0VAA5 305 aa13.13□□□□□ -0.31
CTCFL-219ENST00000608720 MEF2DQ14814 521 aa13.13□□□□□ -0.31
CTCFL-219ENST00000608720 GUCA2BQ16661 112 aa13.13□□□□□ -0.31
CTCFL-219ENST00000608720 TTLL10Q6ZVT0 673 aa13.13□□□□□ -0.31
CTCFL-219ENST00000608720 MDGA2Q7Z553 956 aa13.13□□□□□ -0.31
CTCFL-219ENST00000608720 JAGN1Q8N5M9 183 aa13.13□□□□□ -0.31
CTCFL-219ENST00000608720 FAM174AQ8TBP5 190 aa13.13□□□□□ -0.31
CTCFL-219ENST00000608720 STK35Q8TDR2 534 aa13.13□□□□□ -0.31
CTCFL-219ENST00000608720 FOXRED1Q96CU9 486 aaPredicted RBP13.13□□□□□ -0.31
CTCFL-219ENST00000608720 COA3Q9Y2R0 106 aaPredicted RBP13.13□□□□□ -0.31
CTCFL-219ENST00000608720 NUP210LQ5VU65 1888 aa13.13□□□□□ -0.31
CTCFL-219ENST00000608720 TRAV20A0A0B4J274 112 aa13.13□□□□□ -0.31
CTCFL-219ENST00000608720 NUDT19A8MXV4 375 aa13.13□□□□□ -0.31
CTCFL-219ENST00000608720 OR2T1O43869 369 aa13.13□□□□□ -0.31
CTCFL-219ENST00000608720 AHSA1O95433 338 aa13.13□□□□□ -0.31
CTCFL-219ENST00000608720 SLC25A4P12235 298 aa13.13□□□□□ -0.31
CTCFL-219ENST00000608720 FOLR2P14207 255 aa13.13□□□□□ -0.31
CTCFL-219ENST00000608720 RAB6AP20340 208 aa13.13□□□□□ -0.31
CTCFL-219ENST00000608720 CD34P28906 385 aa13.13□□□□□ -0.31
CTCFL-219ENST00000608720 ARRB1P49407 418 aaPredicted RBP13.13□□□□□ -0.31
CTCFL-219ENST00000608720 STARP49675 285 aa13.13□□□□□ -0.31
CTCFL-219ENST00000608720 PNLIPRP2P54317 469 aa13.13□□□□□ -0.31
CTCFL-219ENST00000608720 MELKQ14680 651 aa13.13□□□□□ -0.31
CTCFL-219ENST00000608720 NR0B2Q15466 257 aa13.13□□□□□ -0.31
CTCFL-219ENST00000608720 GRINAQ7Z429 371 aa13.13□□□□□ -0.31
CTCFL-219ENST00000608720 ZNF584Q8IVC4 421 aa13.13□□□□□ -0.31
CTCFL-219ENST00000608720 C9orf40Q8IXQ3 194 aa13.13□□□□□ -0.31
CTCFL-219ENST00000608720 KCNRGQ8N5I3 272 aa13.13□□□□□ -0.31
CTCFL-219ENST00000608720 NKAIN3Q8N8D7 197 aa13.13□□□□□ -0.31
CTCFL-219ENST00000608720 RELL2Q8NC24 303 aaPredicted RBP13.13□□□□□ -0.31
CTCFL-219ENST00000608720 OR1J2Q8NGS2 313 aa13.13□□□□□ -0.31
CTCFL-219ENST00000608720 GAL3ST1Q99999 423 aa13.13□□□□□ -0.31
CTCFL-219ENST00000608720 ZFP57Q9NU63 452 aa13.13□□□□□ -0.31
CTCFL-219ENST00000608720 EMC9Q9Y3B6 208 aa13.13□□□□□ -0.31
CTCFL-219ENST00000608720 TP53BP1Q12888 1972 aaPredicted RBP13.13□□□□□ -0.31
CTCFL-219ENST00000608720 LOC390937A0A1W2PQ73 354 aa13.12□□□□□ -0.31
CTCFL-219ENST00000608720 C17orf51A8MQB3 221 aa13.12□□□□□ -0.31
CTCFL-219ENST00000608720 ALOX12BO75342 701 aa13.12□□□□□ -0.31
CTCFL-219ENST00000608720 OR2F2O95006 317 aa13.12□□□□□ -0.31
CTCFL-219ENST00000608720 S100A9P06702 114 aaKnown RBP13.12□□□□□ -0.31
CTCFL-219ENST00000608720 ZNF823P16415 610 aa13.12□□□□□ -0.31
CTCFL-219ENST00000608720 ZP2Q05996 745 aa13.12□□□□□ -0.31
CTCFL-219ENST00000608720 SPOCK1Q08629 439 aa13.12□□□□□ -0.31
CTCFL-219ENST00000608720 DHRS2Q13268 280 aa13.12□□□□□ -0.31
CTCFL-219ENST00000608720 OR2F1Q13607 317 aa13.12□□□□□ -0.31
CTCFL-219ENST00000608720 PHF19Q5T6S3 580 aa13.12□□□□□ -0.31
CTCFL-219ENST00000608720 ELP2Q6IA86 826 aa13.12□□□□□ -0.31
CTCFL-219ENST00000608720 RAB12Q6IQ22 244 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms