RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 CEACAM8P31997 349 aaPredicted RBP9.36□□□□□ -0.91
LINC01001-203ENST00000607448 CLDN18P56856 261 aa9.36□□□□□ -0.91
LINC01001-203ENST00000607448 SCAND1P57086 179 aa9.36□□□□□ -0.91
LINC01001-203ENST00000607448 AP3S2P59780 193 aa9.36□□□□□ -0.91
LINC01001-203ENST00000607448 ZNF74Q16587 644 aa9.36□□□□□ -0.91
LINC01001-203ENST00000607448 ZNF684Q5T5D7 378 aa9.36□□□□□ -0.91
LINC01001-203ENST00000607448 NSUN5P2Q63ZY6 315 aa9.36□□□□□ -0.91
LINC01001-203ENST00000607448 GPR139Q6DWJ6 353 aa9.36□□□□□ -0.91
LINC01001-203ENST00000607448 BTN2A1Q7KYR7 527 aa9.36□□□□□ -0.91
LINC01001-203ENST00000607448 KRT74Q7RTS7 529 aa9.36□□□□□ -0.91
LINC01001-203ENST00000607448 HEATR5AQ86XA9 2040 aa9.36□□□□□ -0.91
LINC01001-203ENST00000607448 LURAP1LQ8IV03 231 aa9.36□□□□□ -0.91
LINC01001-203ENST00000607448 LRRC75AQ8NAA5 344 aa9.36□□□□□ -0.91
LINC01001-203ENST00000607448 C9orf106Q8NAJ2 232 aa9.36□□□□□ -0.91
LINC01001-203ENST00000607448 OR2M3Q8NG83 312 aa9.36□□□□□ -0.91
LINC01001-203ENST00000607448 OR5H6Q8NGV6 325 aa9.36□□□□□ -0.91
LINC01001-203ENST00000607448 OR4C3Q8NH37 302 aa9.36□□□□□ -0.91
LINC01001-203ENST00000607448 DUSP19Q8WTR2 217 aa9.36□□□□□ -0.91
LINC01001-203ENST00000607448 SMIM4Q8WVI0 70 aa9.36□□□□□ -0.91
LINC01001-203ENST00000607448 THRSPQ92748 146 aa9.36□□□□□ -0.91
LINC01001-203ENST00000607448 NMNAT3Q96T66 252 aa9.36□□□□□ -0.91
LINC01001-203ENST00000607448 NPAS1Q99742 590 aa9.36□□□□□ -0.91
LINC01001-203ENST00000607448 SLITRK2Q9H156 845 aa9.36□□□□□ -0.91
LINC01001-203ENST00000607448 GHITMQ9H3K2 345 aa9.36□□□□□ -0.91
LINC01001-203ENST00000607448 RANBP3Q9H6Z4 567 aaPredicted RBP9.36□□□□□ -0.91
LINC01001-203ENST00000607448 PLSCR3Q9NRY6 295 aa9.36□□□□□ -0.91
LINC01001-203ENST00000607448 DKKL1Q9UK85 242 aa9.36□□□□□ -0.91
LINC01001-203ENST00000607448 ZNF469Q96JG9 3925 aaPredicted RBP9.35□□□□□ -0.91
LINC01001-203ENST00000607448 IGKV1D-42A0A075B6H8 117 aa9.35□□□□□ -0.91
LINC01001-203ENST00000607448 A0A0A6YYJ9 748 aa9.35□□□□□ -0.91
LINC01001-203ENST00000607448 OR6C68A6NDL8 312 aa9.35□□□□□ -0.91
LINC01001-203ENST00000607448 MBD3L4A6NDZ8 208 aaPredicted RBP9.35□□□□□ -0.91
LINC01001-203ENST00000607448 MBD3L3A6NE82 208 aaPredicted RBP9.35□□□□□ -0.91
LINC01001-203ENST00000607448 MBD3L5A6NJ08 208 aaPredicted RBP9.35□□□□□ -0.91
LINC01001-203ENST00000607448 AIPO00170 330 aa9.35□□□□□ -0.91
LINC01001-203ENST00000607448 SCDO00767 359 aa9.35□□□□□ -0.91
LINC01001-203ENST00000607448 PHYHO14832 338 aa9.35□□□□□ -0.91
LINC01001-203ENST00000607448 SELENOFO60613 162 aa9.35□□□□□ -0.91
LINC01001-203ENST00000607448 ZNF780AO75290 641 aaPredicted RBP9.35□□□□□ -0.91
LINC01001-203ENST00000607448 ACTL6AO96019 429 aa9.35□□□□□ -0.91
LINC01001-203ENST00000607448 HOXD4P09016 255 aaPredicted RBP9.35□□□□□ -0.91
LINC01001-203ENST00000607448 TFPIP10646 304 aa9.35□□□□□ -0.91
LINC01001-203ENST00000607448 SNRPBP14678 240 aaKnown RBP9.35□□□□□ -0.91
LINC01001-203ENST00000607448 CPN1P15169 458 aa9.35□□□□□ -0.91
LINC01001-203ENST00000607448 SRMP19623 302 aa9.35□□□□□ -0.91
LINC01001-203ENST00000607448 MNDAP41218 407 aa9.35□□□□□ -0.91
LINC01001-203ENST00000607448 HCCSP53701 268 aa9.35□□□□□ -0.91
LINC01001-203ENST00000607448 CLDN15P56746 228 aa9.35□□□□□ -0.91
LINC01001-203ENST00000607448 ERVK-25P63136 954 aa9.35□□□□□ -0.91
LINC01001-203ENST00000607448 FOXF2Q12947 444 aa9.35□□□□□ -0.91
LINC01001-203ENST00000607448 SKP2Q13309 424 aa9.35□□□□□ -0.91
LINC01001-203ENST00000607448 LINC01590Q5TEZ4 76 aa9.35□□□□□ -0.91
LINC01001-203ENST00000607448 LEG1Q6P5S2 330 aa9.35□□□□□ -0.91
LINC01001-203ENST00000607448 LYPD4Q6UWN0 246 aa9.35□□□□□ -0.91
LINC01001-203ENST00000607448 ZNF782Q6ZMW2 699 aaPredicted RBP9.35□□□□□ -0.91
LINC01001-203ENST00000607448 ADGRE4PQ86SQ3 457 aa9.35□□□□□ -0.91
LINC01001-203ENST00000607448 LUZP2Q86TE4 346 aa9.35□□□□□ -0.91
LINC01001-203ENST00000607448 DMRTC2Q8IXT2 367 aaPredicted RBP9.35□□□□□ -0.91
LINC01001-203ENST00000607448 PM20D2Q8IYS1 436 aa9.35□□□□□ -0.91
LINC01001-203ENST00000607448 RFLNBQ8N5W9 214 aa9.35□□□□□ -0.91
LINC01001-203ENST00000607448 GATSQ8NAP1 163 aa9.35□□□□□ -0.91
LINC01001-203ENST00000607448 OR4K17Q8NGC6 315 aa9.35□□□□□ -0.91
LINC01001-203ENST00000607448 OR13C5Q8NGS8 318 aa9.35□□□□□ -0.91
LINC01001-203ENST00000607448 OR6K6Q8NGW6 343 aa9.35□□□□□ -0.91
LINC01001-203ENST00000607448 MBD3L2Q8NHZ7 208 aaPredicted RBP9.35□□□□□ -0.91
LINC01001-203ENST00000607448 RAB40AQ8WXH6 277 aa9.35□□□□□ -0.91
LINC01001-203ENST00000607448 LURAP1Q96LR2 239 aa9.35□□□□□ -0.91
LINC01001-203ENST00000607448 SFXN2Q96NB2 322 aa9.35□□□□□ -0.91
LINC01001-203ENST00000607448 OR14A2Q96R54 314 aa9.35□□□□□ -0.91
LINC01001-203ENST00000607448 ALG12Q9BV10 488 aa9.35□□□□□ -0.91
LINC01001-203ENST00000607448 CACNG6Q9BXT2 260 aa9.35□□□□□ -0.91
LINC01001-203ENST00000607448 DIABLOQ9NR28 239 aa9.35□□□□□ -0.91
LINC01001-203ENST00000607448 COPS3Q9UNS2 423 aa9.35□□□□□ -0.91
LINC01001-203ENST00000607448 BOLA1Q9Y3E2 137 aa9.35□□□□□ -0.91
LINC01001-203ENST00000607448 ADAM18Q9Y3Q7 739 aa9.35□□□□□ -0.91
LINC01001-203ENST00000607448 ETV7Q9Y603 341 aa9.35□□□□□ -0.91
LINC01001-203ENST00000607448 MYO9AB2RTY4 2548 aa9.34□□□□□ -0.91
LINC01001-203ENST00000607448 TEX13CA0A0J9YWL9 993 aa9.34□□□□□ -0.91
LINC01001-203ENST00000607448 A0A1B0GVI7 797 aa9.34□□□□□ -0.91
LINC01001-203ENST00000607448 IFITM5A6NNB3 132 aa9.34□□□□□ -0.91
LINC01001-203ENST00000607448 ZNF264O43296 627 aa9.34□□□□□ -0.91
LINC01001-203ENST00000607448 PRAF2O60831 178 aa9.34□□□□□ -0.91
LINC01001-203ENST00000607448 ASAH2BP0C7U1 165 aa9.34□□□□□ -0.91
LINC01001-203ENST00000607448 ANXA3P12429 323 aa9.34□□□□□ -0.91
LINC01001-203ENST00000607448 ZNF708P17019 499 aa9.34□□□□□ -0.91
LINC01001-203ENST00000607448 UQCRC1P31930 480 aa9.34□□□□□ -0.91
LINC01001-203ENST00000607448 TIMP3P35625 211 aa9.34□□□□□ -0.91
LINC01001-203ENST00000607448 DSCR4P56555 118 aaPredicted RBP9.34□□□□□ -0.91
LINC01001-203ENST00000607448 GNG2P59768 71 aa9.34□□□□□ -0.91
LINC01001-203ENST00000607448 KLF9Q13886 244 aaPredicted RBP9.34□□□□□ -0.91
LINC01001-203ENST00000607448 NDUFAF6Q330K2 333 aa9.34□□□□□ -0.91
LINC01001-203ENST00000607448 ALG10Q5BKT4 473 aa9.34□□□□□ -0.91
LINC01001-203ENST00000607448 Q5BKY6 102 aa9.34□□□□□ -0.91
LINC01001-203ENST00000607448 BCL2L15Q5TBC7 163 aa9.34□□□□□ -0.91
LINC01001-203ENST00000607448 THOC7Q6I9Y2 204 aaKnown RBP9.34□□□□□ -0.91
LINC01001-203ENST00000607448 LRRN1Q6UXK5 716 aa9.34□□□□□ -0.91
LINC01001-203ENST00000607448 FAM122BQ7Z309 247 aa9.34□□□□□ -0.91
LINC01001-203ENST00000607448 OR2T4Q8NH00 348 aa9.34□□□□□ -0.91
LINC01001-203ENST00000607448 OR56B4Q8NH76 319 aa9.34□□□□□ -0.91
LINC01001-203ENST00000607448 MOSPD2Q8NHP6 518 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms