RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 MKRN2OSH3BPM6 223 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 ZW10O43264 779 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 HSBP1O75506 76 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 CDC123O75794 336 aaPredicted RBP3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 SC5DO75845 299 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 KLF8O95600 359 aaPredicted RBP3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 NUDT14O95848 222 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 OXTP01178 125 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 KLK1P06870 262 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 RNH1P13489 461 aaKnown RBP3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 CD1DP15813 335 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 SDC1P18827 310 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 SERPINA2P20848 420 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 FASP25445 335 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 IVDP26440 423 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 LEPP41159 167 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 TSFMP43897 325 aaKnown RBP3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 HNRNPA3P51991 378 aaKnown RBP3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 UBE2G2P60604 165 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 ATP6V0D1P61421 351 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 VLDLRP98155 873 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 DHODHQ02127 395 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 ARL16Q0P5N6 197 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 SMARCB1Q12824 385 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 LY6DQ14210 128 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 FASTKQ14296 549 aaKnown RBP3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 NUMA1Q14980 2115 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 MAPRE2Q15555 327 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 GABRA6Q16445 453 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 ECSCRQ19T08 205 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 KIAA1644Q3SXP7 199 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 VWA2Q5GFL6 755 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 CDKL4Q5MAI5 379 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 ACER2Q5QJU3 275 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 OR2G6Q5TZ20 316 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 FAM219BQ5XKK7 198 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 C8orf74Q6P047 294 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 PRMT9Q6P2P2 845 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 EMBQ6PCB8 327 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 RBMS3Q6XE24 437 aaKnown RBP3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 TMPRSS11AQ6ZMR5 421 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 CREB3L2Q70SY1 520 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 NUFIP2Q7Z417 695 aaKnown RBP3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 TMEM150AQ86TG1 271 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 TRPT1Q86TN4 253 aaKnown RBP3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 NFE4Q86UQ8 179 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 PLCZ1Q86YW0 608 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 RNF10Q8N5U6 811 aaKnown RBP3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 ZNF491Q8N8L2 437 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 LGALS14Q8TCE9 139 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 MAPK15Q8TD08 544 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 TRUB1Q8WWH5 349 aaKnown RBP3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 BAALCQ8WXS3 180 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 DNASE2BQ8WZ79 361 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 TM9SF4Q92544 642 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 GTF3AQ92664 365 aaKnown RBP3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 LRRC45Q96CN5 670 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 DUS3LQ96G46 650 aaKnown RBP3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 RNF170Q96K19 258 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 PGLYRP2Q96PD5 576 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 NAT9Q9BTE0 207 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 TMEM59Q9BXS4 323 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 BEX1Q9HBH7 125 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 NECAP2Q9NVZ3 263 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 RMND1Q9NWS8 449 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 PAK1IP1Q9NWT1 392 aaPredicted RBP3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 THUMPD1Q9NXG2 353 aaKnown RBP3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 B3GNT2Q9NY97 397 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 RBAKQ9NYW8 714 aaPredicted RBP3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 THYN1Q9P016 225 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 WARS2Q9UGM6 360 aaKnown RBP3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 HMGXB4Q9UGU5 601 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 NXT1Q9UKK6 140 aaKnown RBP3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 PSMD13Q9UNM6 376 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 TSSC4Q9Y5U2 329 aaPredicted RBP3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 CDH10Q9Y6N8 788 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 OBSL1O75147 1896 aa3.18□□□□□ -1.9
IGHV3-29-201ENST00000604817 DOCK9Q9BZ29 2069 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 IGHV1OR15-9A0A0B4J2B8 117 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 IQCMA0A1B0GVH7 501 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 MGAT4DA6NG13 374 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 C15orf61A6NNL5 157 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 CENPXA8MT69 81 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 C16orf97H3BN30 126 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 SMLR1H3BR10 107 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 EMC8O43402 210 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 COCHO43405 550 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 XRCC2O43543 280 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 KLRC4O43908 158 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 TRMUO75648 421 aaKnown RBP3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 AP2A2O94973 939 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 NXPH4O95158 308 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 FADS2O95864 444 aaKnown RBP3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 IGHV3-9P01782 118 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 ATP1A1P05023 1023 aaKnown RBP3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 APODP05090 189 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 FCGR3AP08637 254 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 KRT16P08779 473 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 STSP08842 583 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 OR4Q2P0C623 313 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms