RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 YIPF5Q969M3 257 aa12.3□□□□□ -0.44
TUBE1-208ENST00000604743 ZNF556Q9HAH1 456 aa12.3□□□□□ -0.44
TUBE1-208ENST00000604743 DECR2Q9NUI1 292 aa12.3□□□□□ -0.44
TUBE1-208ENST00000604743 TBCCD1Q9NVR7 557 aa12.3□□□□□ -0.44
TUBE1-208ENST00000604743 PTTG3PQ9NZH4 202 aa12.3□□□□□ -0.44
TUBE1-208ENST00000604743 ARRDC5A6NEK1 342 aa12.29□□□□□ -0.44
TUBE1-208ENST00000604743 RIIAD1A6NNX1 92 aa12.29□□□□□ -0.44
TUBE1-208ENST00000604743 F5H5K5 113 aa12.29□□□□□ -0.44
TUBE1-208ENST00000604743 ICMTO60725 284 aa12.29□□□□□ -0.44
TUBE1-208ENST00000604743 IGHV4-31P0DP07 118 aa12.29□□□□□ -0.44
TUBE1-208ENST00000604743 CLUP10909 449 aa12.29□□□□□ -0.44
TUBE1-208ENST00000604743 ZNF16P17020 682 aaPredicted RBP12.29□□□□□ -0.44
TUBE1-208ENST00000604743 GIFP27352 417 aa12.29□□□□□ -0.44
TUBE1-208ENST00000604743 PSG7Q13046 419 aa12.29□□□□□ -0.44
TUBE1-208ENST00000604743 RIN1Q13671 783 aa12.29□□□□□ -0.44
TUBE1-208ENST00000604743 GINS1Q14691 196 aa12.29□□□□□ -0.44
TUBE1-208ENST00000604743 TRIP10Q15642 601 aa12.29□□□□□ -0.44
TUBE1-208ENST00000604743 CYB5R2Q6BCY4 276 aa12.29□□□□□ -0.44
TUBE1-208ENST00000604743 SLC18B1Q6NT16 456 aa12.29□□□□□ -0.44
TUBE1-208ENST00000604743 ATG16L2Q8NAA4 619 aa12.29□□□□□ -0.44
TUBE1-208ENST00000604743 ZNF511Q8NB15 262 aa12.29□□□□□ -0.44
TUBE1-208ENST00000604743 PAPD5Q8NDF8 572 aaKnown RBP12.29□□□□□ -0.44
TUBE1-208ENST00000604743 OR6K6Q8NGW6 343 aa12.29□□□□□ -0.44
TUBE1-208ENST00000604743 CMBLQ96DG6 245 aa12.29□□□□□ -0.44
TUBE1-208ENST00000604743 COQ7Q99807 217 aa12.29□□□□□ -0.44
TUBE1-208ENST00000604743 RBM4Q9BWF3 364 aaKnown RBP12.29□□□□□ -0.44
TUBE1-208ENST00000604743 HDHD2Q9H0R4 259 aa12.29□□□□□ -0.44
TUBE1-208ENST00000604743 NARFLQ9H6Q4 476 aa12.29□□□□□ -0.44
TUBE1-208ENST00000604743 MED20Q9H944 212 aa12.29□□□□□ -0.44
TUBE1-208ENST00000604743 CHODLQ9H9P2 273 aa12.29□□□□□ -0.44
TUBE1-208ENST00000604743 MSL2Q9HCI7 577 aa12.29□□□□□ -0.44
TUBE1-208ENST00000604743 ZNF275Q9NSD4 429 aaPredicted RBP12.29□□□□□ -0.44
TUBE1-208ENST00000604743 KIF17Q9P2E2 1029 aa12.29□□□□□ -0.44
TUBE1-208ENST00000604743 ZSCAN5BA6NJL1 495 aa12.28□□□□□ -0.44
TUBE1-208ENST00000604743 FAM183AA6NL82 134 aa12.28□□□□□ -0.44
TUBE1-208ENST00000604743 PPIHO43447 177 aaKnown RBP12.28□□□□□ -0.44
TUBE1-208ENST00000604743 TLX2O43763 284 aaPredicted RBP12.28□□□□□ -0.44
TUBE1-208ENST00000604743 DEAF1O75398 565 aaPredicted RBP12.28□□□□□ -0.44
TUBE1-208ENST00000604743 IGHV1-46P01743 117 aa12.28□□□□□ -0.44
TUBE1-208ENST00000604743 SPARCP09486 303 aa12.28□□□□□ -0.44
TUBE1-208ENST00000604743 ANXA8P13928 327 aa12.28□□□□□ -0.44
TUBE1-208ENST00000604743 ZNF23P17027 643 aa12.28□□□□□ -0.44
TUBE1-208ENST00000604743 ZNF3P17036 446 aa12.28□□□□□ -0.44
TUBE1-208ENST00000604743 SPI1P17947 270 aa12.28□□□□□ -0.44
TUBE1-208ENST00000604743 ACHEP22303 614 aa12.28□□□□□ -0.44
TUBE1-208ENST00000604743 FMO3P31513 532 aa12.28□□□□□ -0.44
TUBE1-208ENST00000604743 GRK5P34947 590 aa12.28□□□□□ -0.44
TUBE1-208ENST00000604743 GGT2P36268 569 aa12.28□□□□□ -0.44
TUBE1-208ENST00000604743 GPR6P46095 362 aaPredicted RBP12.28□□□□□ -0.44
TUBE1-208ENST00000604743 MMP15P51511 669 aa12.28□□□□□ -0.44
TUBE1-208ENST00000604743 HLXQ14774 488 aaPredicted RBP12.28□□□□□ -0.44
TUBE1-208ENST00000604743 PCGF3Q3KNV8 242 aa12.28□□□□□ -0.44
TUBE1-208ENST00000604743 C6orf52Q5T4I8 152 aa12.28□□□□□ -0.44
TUBE1-208ENST00000604743 ACSM5Q6NUN0 579 aa12.28□□□□□ -0.44
TUBE1-208ENST00000604743 USP51Q70EK9 711 aa12.28□□□□□ -0.44
TUBE1-208ENST00000604743 OR5AS1Q8N127 324 aa12.28□□□□□ -0.44
TUBE1-208ENST00000604743 DCLRE1CQ96SD1 692 aaKnown RBP12.28□□□□□ -0.44
TUBE1-208ENST00000604743 ATF6BQ99941 703 aa12.28□□□□□ -0.44
TUBE1-208ENST00000604743 MMADHCQ9H3L0 296 aaPredicted RBP12.28□□□□□ -0.44
TUBE1-208ENST00000604743 WDR76Q9H967 626 aa12.28□□□□□ -0.44
TUBE1-208ENST00000604743 SAP30LQ9HAJ7 183 aa12.28□□□□□ -0.44
TUBE1-208ENST00000604743 CMC2Q9NRP2 79 aa12.28□□□□□ -0.44
TUBE1-208ENST00000604743 TREM2Q9NZC2 230 aa12.28□□□□□ -0.44
TUBE1-208ENST00000604743 CYB5R1Q9UHQ9 305 aa12.28□□□□□ -0.44
TUBE1-208ENST00000604743 ATPIF1Q9UII2 106 aa12.28□□□□□ -0.44
TUBE1-208ENST00000604743 DYSFO75923 2080 aa12.28□□□□□ -0.44
TUBE1-208ENST00000604743 A8MV72 311 aaPredicted RBP12.27□□□□□ -0.45
TUBE1-208ENST00000604743 H3BSA7 217 aa12.27□□□□□ -0.45
TUBE1-208ENST00000604743 ZNF593O00488 134 aaPredicted RBP12.27□□□□□ -0.45
TUBE1-208ENST00000604743 LILRA1O75019 489 aa12.27□□□□□ -0.45
TUBE1-208ENST00000604743 CIB2O75838 187 aa12.27□□□□□ -0.45
TUBE1-208ENST00000604743 PSKH1P11801 424 aa12.27□□□□□ -0.45
TUBE1-208ENST00000604743 OSMP13725 252 aa12.27□□□□□ -0.45
TUBE1-208ENST00000604743 IL2RGP31785 369 aa12.27□□□□□ -0.45
TUBE1-208ENST00000604743 LIPAP38571 399 aa12.27□□□□□ -0.45
TUBE1-208ENST00000604743 RGS6P49758 472 aa12.27□□□□□ -0.45
TUBE1-208ENST00000604743 GZMKP49863 264 aa12.27□□□□□ -0.45
TUBE1-208ENST00000604743 CHN2P52757 468 aa12.27□□□□□ -0.45
TUBE1-208ENST00000604743 SLC25A1P53007 311 aa12.27□□□□□ -0.45
TUBE1-208ENST00000604743 CCNIQ14094 377 aa12.27□□□□□ -0.45
TUBE1-208ENST00000604743 RSPO1Q2MKA7 263 aaPredicted RBP12.27□□□□□ -0.45
TUBE1-208ENST00000604743 SLC27A4Q6P1M0 643 aa12.27□□□□□ -0.45
TUBE1-208ENST00000604743 SHQ1Q6PI26 577 aaKnown RBP12.27□□□□□ -0.45
TUBE1-208ENST00000604743 DCXRQ7Z4W1 244 aa12.27□□□□□ -0.45
TUBE1-208ENST00000604743 NAA40Q86UY6 237 aa12.27□□□□□ -0.45
TUBE1-208ENST00000604743 OR5L1Q8NGL2 311 aa12.27□□□□□ -0.45
TUBE1-208ENST00000604743 PTP4A1Q93096 173 aa12.27□□□□□ -0.45
TUBE1-208ENST00000604743 APOBEC3DQ96AK3 386 aaPredicted RBP12.27□□□□□ -0.45
TUBE1-208ENST00000604743 MAP6Q96JE9 813 aa12.27□□□□□ -0.45
TUBE1-208ENST00000604743 COG8Q96MW5 612 aa12.27□□□□□ -0.45
TUBE1-208ENST00000604743 HCAR1Q9BXC0 346 aa12.27□□□□□ -0.45
TUBE1-208ENST00000604743 NMNAT2Q9BZQ4 307 aa12.27□□□□□ -0.45
TUBE1-208ENST00000604743 OR51V1Q9H2C8 321 aa12.27□□□□□ -0.45
TUBE1-208ENST00000604743 NTN4Q9HB63 628 aa12.27□□□□□ -0.45
TUBE1-208ENST00000604743 CYSLTR2Q9NS75 346 aa12.27□□□□□ -0.45
TUBE1-208ENST00000604743 NKIRAS2Q9NYR9 191 aa12.27□□□□□ -0.45
TUBE1-208ENST00000604743 KCNG2Q9UJ96 466 aa12.27□□□□□ -0.45
TUBE1-208ENST00000604743 PURGQ9UJV8 347 aaKnown RBP12.27□□□□□ -0.45
TUBE1-208ENST00000604743 COMMD3-BMI1R4GMX3 469 aa12.27□□□□□ -0.45
TUBE1-208ENST00000604743 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.27□□□□□ -0.455e-7■■■■■ 28.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms