RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 GSK3BP49841 420 aa11.05□□□□□ -0.64
RPS28-204ENST00000602140 MMP16P51512 607 aa11.05□□□□□ -0.64
RPS28-204ENST00000602140 FOXL1Q12952 345 aa11.05□□□□□ -0.64
RPS28-204ENST00000602140 FGD3Q5JSP0 725 aa11.05□□□□□ -0.64
RPS28-204ENST00000602140 GPR139Q6DWJ6 353 aa11.05□□□□□ -0.64
RPS28-204ENST00000602140 OR2T2Q6IF00 324 aa11.05□□□□□ -0.64
RPS28-204ENST00000602140 PTCHD4Q6ZW05 846 aa11.05□□□□□ -0.64
RPS28-204ENST00000602140 PIP4P2Q8N4L2 257 aa11.05□□□□□ -0.64
RPS28-204ENST00000602140 OR10AD1Q8NGE0 317 aa11.05□□□□□ -0.64
RPS28-204ENST00000602140 OR5L1Q8NGL2 311 aa11.05□□□□□ -0.64
RPS28-204ENST00000602140 ZNF420Q8TAQ5 688 aaPredicted RBP11.05□□□□□ -0.64
RPS28-204ENST00000602140 FAM162AQ96A26 154 aa11.05□□□□□ -0.64
RPS28-204ENST00000602140 GPA33Q99795 319 aa11.05□□□□□ -0.64
RPS28-204ENST00000602140 HOPXQ9BPY8 73 aaPredicted RBP11.05□□□□□ -0.64
RPS28-204ENST00000602140 NUAK2Q9H093 628 aa11.05□□□□□ -0.64
RPS28-204ENST00000602140 NRIP3Q9NQ35 241 aa11.05□□□□□ -0.64
RPS28-204ENST00000602140 VSX1Q9NZR4 365 aaPredicted RBP11.05□□□□□ -0.64
RPS28-204ENST00000602140 OR5V1Q9UGF6 321 aa11.05□□□□□ -0.64
RPS28-204ENST00000602140 POLR1DQ9Y2S0 133 aa11.05□□□□□ -0.64
RPS28-204ENST00000602140 IER3IP1Q9Y5U9 82 aa11.05□□□□□ -0.64
RPS28-204ENST00000602140 A0A1W2PRQ8 180 aa11.04□□□□□ -0.64
RPS28-204ENST00000602140 H0YL77 283 aa11.04□□□□□ -0.64
RPS28-204ENST00000602140 J3QW42 95 aa11.04□□□□□ -0.64
RPS28-204ENST00000602140 IFNL4K9M1U5 179 aa11.04□□□□□ -0.64
RPS28-204ENST00000602140 GPANK1O95872 356 aa11.04□□□□□ -0.64
RPS28-204ENST00000602140 CYB5R3P00387 301 aaPredicted RBP11.04□□□□□ -0.64
RPS28-204ENST00000602140 H1F0P07305 194 aaKnown RBP11.04□□□□□ -0.64
RPS28-204ENST00000602140 WNT2P09544 360 aa11.04□□□□□ -0.64
RPS28-204ENST00000602140 OMPP47874 163 aa11.04□□□□□ -0.64
RPS28-204ENST00000602140 CENPAP49450 140 aa11.04□□□□□ -0.64
RPS28-204ENST00000602140 RGS6P49758 472 aa11.04□□□□□ -0.64
RPS28-204ENST00000602140 BAMBIQ13145 260 aa11.04□□□□□ -0.64
RPS28-204ENST00000602140 DGCR6Q14129 220 aa11.04□□□□□ -0.64
RPS28-204ENST00000602140 SLC27A4Q6P1M0 643 aa11.04□□□□□ -0.64
RPS28-204ENST00000602140 FBXW12Q6X9E4 464 aa11.04□□□□□ -0.64
RPS28-204ENST00000602140 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.04□□□□□ -0.64
RPS28-204ENST00000602140 ADCK1Q86TW2 530 aa11.04□□□□□ -0.64
RPS28-204ENST00000602140 MUC20Q8N307 709 aaPredicted RBP11.04□□□□□ -0.64
RPS28-204ENST00000602140 OR8G5Q8NG78 346 aa11.04□□□□□ -0.64
RPS28-204ENST00000602140 OR13G1Q8NGZ3 307 aa11.04□□□□□ -0.64
RPS28-204ENST00000602140 RSRC1Q96IZ7 334 aaKnown RBP11.04□□□□□ -0.64
RPS28-204ENST00000602140 MEGF10Q96KG7 1140 aa11.04□□□□□ -0.64
RPS28-204ENST00000602140 C1orf147Q96MC9 270 aaPredicted RBP11.04□□□□□ -0.64
RPS28-204ENST00000602140 ZNF48Q96MX3 618 aaPredicted RBP11.04□□□□□ -0.64
RPS28-204ENST00000602140 GPX7Q96SL4 187 aaPredicted RBP11.04□□□□□ -0.64
RPS28-204ENST00000602140 ZNF747Q9BV97 191 aa11.04□□□□□ -0.64
RPS28-204ENST00000602140 SSBP3Q9BWW4 388 aaPredicted RBP11.04□□□□□ -0.64
RPS28-204ENST00000602140 MS4A7Q9GZW8 240 aaPredicted RBP11.04□□□□□ -0.64
RPS28-204ENST00000602140 EFCAB1Q9HAE3 211 aa11.04□□□□□ -0.64
RPS28-204ENST00000602140 ATPIF1Q9UII2 106 aa11.04□□□□□ -0.64
RPS28-204ENST00000602140 LRCH1Q9Y2L9 728 aa11.04□□□□□ -0.64
RPS28-204ENST00000602140 FAM32AQ9Y421 112 aaKnown RBP11.04□□□□□ -0.64
RPS28-204ENST00000602140 PKD1L1Q8TDX9 2849 aa11.03□□□□□ -0.64
RPS28-204ENST00000602140 IGHV3-64DA0A0J9YX35 117 aa11.03□□□□□ -0.64
RPS28-204ENST00000602140 TMPRSS2O15393 492 aa11.03□□□□□ -0.64
RPS28-204ENST00000602140 RPS2P15880 293 aaKnown RBP11.03□□□□□ -0.64
RPS28-204ENST00000602140 CD80P33681 288 aa11.03□□□□□ -0.64
RPS28-204ENST00000602140 CDKN2AP42771 156 aaKnown RBP11.03□□□□□ -0.64
RPS28-204ENST00000602140 SRP9P49458 86 aaKnown RBP11.03□□□□□ -0.64
RPS28-204ENST00000602140 RPS6KA3P51812 740 aa11.03□□□□□ -0.64
RPS28-204ENST00000602140 FXYD6P3P58550 94 aa11.03□□□□□ -0.64
RPS28-204ENST00000602140 PAX8Q06710 450 aa11.03□□□□□ -0.64
RPS28-204ENST00000602140 KCNMB1Q16558 191 aa11.03□□□□□ -0.64
RPS28-204ENST00000602140 MEP1BQ16820 701 aa11.03□□□□□ -0.64
RPS28-204ENST00000602140 C8orf82Q6P1X6 216 aaPredicted RBP11.03□□□□□ -0.64
RPS28-204ENST00000602140 SHISA2Q6UWI4 295 aa11.03□□□□□ -0.64
RPS28-204ENST00000602140 DPY19L2P2Q6ZN68 376 aa11.03□□□□□ -0.64
RPS28-204ENST00000602140 BHLHE23Q8NDY6 225 aa11.03□□□□□ -0.64
RPS28-204ENST00000602140 GJC3Q8NFK1 279 aa11.03□□□□□ -0.64
RPS28-204ENST00000602140 OR52E2Q8NGJ4 325 aa11.03□□□□□ -0.64
RPS28-204ENST00000602140 APOBEC3DQ96AK3 386 aaPredicted RBP11.03□□□□□ -0.64
RPS28-204ENST00000602140 ZNF582Q96NG8 517 aaPredicted RBP11.03□□□□□ -0.64
RPS28-204ENST00000602140 TSSK2Q96PF2 358 aa11.03□□□□□ -0.64
RPS28-204ENST00000602140 KCTD14Q9BQ13 255 aaPredicted RBP11.03□□□□□ -0.64
RPS28-204ENST00000602140 WDR76Q9H967 626 aa11.03□□□□□ -0.64
RPS28-204ENST00000602140 TMEM165Q9HC07 324 aa11.03□□□□□ -0.64
RPS28-204ENST00000602140 NDUFAF4Q9P032 175 aa11.03□□□□□ -0.64
RPS28-204ENST00000602140 RPS6KA6Q9UK32 745 aa11.03□□□□□ -0.64
RPS28-204ENST00000602140 AURKCQ9UQB9 309 aa11.03□□□□□ -0.64
RPS28-204ENST00000602140 MGAM2Q2M2H8 2515 aa11.03□□□□□ -0.64
RPS28-204ENST00000602140 IGHV3OR16-10A0A075B7F0 116 aa11.02□□□□□ -0.65
RPS28-204ENST00000602140 TRBV4-1A0A0J9YWV2 114 aa11.02□□□□□ -0.65
RPS28-204ENST00000602140 UNC119BA6NIH7 251 aa11.02□□□□□ -0.65
RPS28-204ENST00000602140 DCTN6O00399 190 aa11.02□□□□□ -0.65
RPS28-204ENST00000602140 MLNRO43193 412 aa11.02□□□□□ -0.65
RPS28-204ENST00000602140 DIRAS1O95057 198 aa11.02□□□□□ -0.65
RPS28-204ENST00000602140 TXNDC12O95881 172 aa11.02□□□□□ -0.65
RPS28-204ENST00000602140 IGHV4-38-2P0DP08 117 aa11.02□□□□□ -0.65
RPS28-204ENST00000602140 RHCEP18577 417 aa11.02□□□□□ -0.65
RPS28-204ENST00000602140 CRABP1P29762 137 aa11.02□□□□□ -0.65
RPS28-204ENST00000602140 NUDT2P50583 147 aa11.02□□□□□ -0.65
RPS28-204ENST00000602140 GNB2P62879 340 aa11.02□□□□□ -0.65
RPS28-204ENST00000602140 HIST1H3AP68431 136 aa11.02□□□□□ -0.65
RPS28-204ENST00000602140 PAX2Q02962 417 aa11.02□□□□□ -0.65
RPS28-204ENST00000602140 SEC23BQ15437 767 aa11.02□□□□□ -0.65
RPS28-204ENST00000602140 HIST2H3PS2Q5TEC6 136 aa11.02□□□□□ -0.65
RPS28-204ENST00000602140 PGM2L1Q6PCE3 622 aa11.02□□□□□ -0.65
RPS28-204ENST00000602140 DNM1P34Q6PK57 102 aa11.02□□□□□ -0.65
RPS28-204ENST00000602140 CORO6Q6QEF8 472 aa11.02□□□□□ -0.65
RPS28-204ENST00000602140 HIST2H3AQ71DI3 136 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms