RNA–Protein interactions for RNA: ENST00000601373.5

IRF3-229, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-229ENST00000601373 MS4A3Q96HJ5 214 aa12.05□□□□□ -0.48
IRF3-229ENST00000601373 DCLRE1CQ96SD1 692 aaKnown RBP12.05□□□□□ -0.48
IRF3-229ENST00000601373 DDX28Q9NUL7 540 aaKnown RBP12.05□□□□□ -0.48
IRF3-229ENST00000601373 OR52A1Q9UKL2 312 aa12.05□□□□□ -0.48
IRF3-229ENST00000601373 EMC9Q9Y3B6 208 aa12.05□□□□□ -0.48
IRF3-229ENST00000601373 PMF1-BGLAPU3KQ54 211 aa12.05□□□□□ -0.48
IRF3-229ENST00000601373 TRBV5-5A0A0J9YX44 114 aa12.04□□□□□ -0.48
IRF3-229ENST00000601373 RER1O15258 196 aa12.04□□□□□ -0.48
IRF3-229ENST00000601373 WDR1O75083 606 aa12.04□□□□□ -0.48
IRF3-229ENST00000601373 WISP2O76076 250 aa12.04□□□□□ -0.48
IRF3-229ENST00000601373 PNPP00491 289 aa12.04□□□□□ -0.48
IRF3-229ENST00000601373 RAF1P04049 648 aa12.04□□□□□ -0.48
IRF3-229ENST00000601373 ISG15P05161 165 aa12.04□□□□□ -0.48
IRF3-229ENST00000601373 HOXD4P09016 255 aaPredicted RBP12.04□□□□□ -0.48
IRF3-229ENST00000601373 UCHL1P09936 223 aa12.04□□□□□ -0.48
IRF3-229ENST00000601373 CFL1P23528 166 aaKnown RBP12.04□□□□□ -0.48
IRF3-229ENST00000601373 KIR3DL2P43630 455 aa12.04□□□□□ -0.48
IRF3-229ENST00000601373 OR3A2P47893 321 aa12.04□□□□□ -0.48
IRF3-229ENST00000601373 PSMA6P60900 246 aaKnown RBP12.04□□□□□ -0.48
IRF3-229ENST00000601373 INSL4Q14641 139 aa12.04□□□□□ -0.48
IRF3-229ENST00000601373 ACSF3Q4G176 576 aaPredicted RBP12.04□□□□□ -0.48
IRF3-229ENST00000601373 ELFN2Q5R3F8 820 aa12.04□□□□□ -0.48
IRF3-229ENST00000601373 TMEM244Q5VVB8 128 aa12.04□□□□□ -0.48
IRF3-229ENST00000601373 FBXW9Q5XUX1 488 aa12.04□□□□□ -0.48
IRF3-229ENST00000601373 NSUN5P2Q63ZY6 315 aa12.04□□□□□ -0.48
IRF3-229ENST00000601373 ZNF324BQ6AW86 544 aaPredicted RBP12.04□□□□□ -0.48
IRF3-229ENST00000601373 ZNF813Q6ZN06 617 aa12.04□□□□□ -0.48
IRF3-229ENST00000601373 ZNF627Q7L945 461 aa12.04□□□□□ -0.48
IRF3-229ENST00000601373 FGD2Q7Z6J4 655 aa12.04□□□□□ -0.48
IRF3-229ENST00000601373 SLC22A24Q8N4F4 322 aa12.04□□□□□ -0.48
IRF3-229ENST00000601373 IL17RDQ8NFM7 739 aa12.04□□□□□ -0.48
IRF3-229ENST00000601373 OR5M9Q8NGP3 310 aa12.04□□□□□ -0.48
IRF3-229ENST00000601373 OR6Q1Q8NGQ2 317 aa12.04□□□□□ -0.48
IRF3-229ENST00000601373 AP3S1Q92572 193 aa12.04□□□□□ -0.48
IRF3-229ENST00000601373 KCNJ15Q99712 375 aa12.04□□□□□ -0.48
IRF3-229ENST00000601373 SH3GL3Q99963 347 aa12.04□□□□□ -0.48
IRF3-229ENST00000601373 HDHD2Q9H0R4 259 aa12.04□□□□□ -0.48
IRF3-229ENST00000601373 PNRC2Q9NPJ4 139 aaKnown RBP12.04□□□□□ -0.48
IRF3-229ENST00000601373 GTF2A1LQ9UNN4 478 aa12.04□□□□□ -0.48
IRF3-229ENST00000601373 TIMM10BQ9Y5J6 103 aa12.04□□□□□ -0.48
IRF3-229ENST00000601373 PEX16Q9Y5Y5 336 aa12.04□□□□□ -0.48
IRF3-229ENST00000601373 IQCMA0A1B0GVH7 501 aa12.03□□□□□ -0.48
IRF3-229ENST00000601373 PDCD5O14737 125 aa12.03□□□□□ -0.48
IRF3-229ENST00000601373 CNOT4O95628 575 aaKnown RBP12.03□□□□□ -0.48
IRF3-229ENST00000601373 WNT11O96014 354 aa12.03□□□□□ -0.48
IRF3-229ENST00000601373 UBCP0CG48 685 aaKnown RBP12.03□□□□□ -0.48
IRF3-229ENST00000601373 ACHEP22303 614 aa12.03□□□□□ -0.48
IRF3-229ENST00000601373 S100A5P33763 92 aa12.03□□□□□ -0.48
IRF3-229ENST00000601373 ARF1P84077 181 aaKnown RBP12.03□□□□□ -0.48
IRF3-229ENST00000601373 MXD1Q05195 221 aa12.03□□□□□ -0.48
IRF3-229ENST00000601373 RAB35Q15286 201 aa12.03□□□□□ -0.48
IRF3-229ENST00000601373 EIF2S3LQ2VIR3 472 aaKnown RBP12.03□□□□□ -0.48
IRF3-229ENST00000601373 LINC00303Q3SY05 128 aa12.03□□□□□ -0.48
IRF3-229ENST00000601373 HSD17B12Q53GQ0 312 aa12.03□□□□□ -0.48
IRF3-229ENST00000601373 CCDC92Q53HC0 331 aaPredicted RBP12.03□□□□□ -0.48
IRF3-229ENST00000601373 BCL2L15Q5TBC7 163 aa12.03□□□□□ -0.48
IRF3-229ENST00000601373 ZNF585AQ6P3V2 769 aa12.03□□□□□ -0.48
IRF3-229ENST00000601373 FAM214BQ7L5A3 538 aa12.03□□□□□ -0.48
IRF3-229ENST00000601373 SLC16A14Q7RTX9 510 aa12.03□□□□□ -0.48
IRF3-229ENST00000601373 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.03□□□□□ -0.48
IRF3-229ENST00000601373 DPPA2Q7Z7J5 298 aa12.03□□□□□ -0.48
IRF3-229ENST00000601373 ELMOD2Q8IZ81 293 aa12.03□□□□□ -0.48
IRF3-229ENST00000601373 UBE2J2Q8N2K1 259 aa12.03□□□□□ -0.48
IRF3-229ENST00000601373 OR13C5Q8NGS8 318 aa12.03□□□□□ -0.48
IRF3-229ENST00000601373 S100ZQ8WXG8 99 aa12.03□□□□□ -0.48
IRF3-229ENST00000601373 HTRA1Q92743 480 aa12.03□□□□□ -0.48
IRF3-229ENST00000601373 FBXO17Q96EF6 278 aa12.03□□□□□ -0.48
IRF3-229ENST00000601373 OR14A2Q96R54 314 aa12.03□□□□□ -0.48
IRF3-229ENST00000601373 ATF6BQ99941 703 aa12.03□□□□□ -0.48
IRF3-229ENST00000601373 SLITRK2Q9H156 845 aa12.03□□□□□ -0.48
IRF3-229ENST00000601373 TPK1Q9H3S4 243 aa12.03□□□□□ -0.48
IRF3-229ENST00000601373 G6PC2Q9NQR9 355 aa12.03□□□□□ -0.48
IRF3-229ENST00000601373 ZNF71Q9NQZ8 489 aaPredicted RBP12.03□□□□□ -0.48
IRF3-229ENST00000601373 FAM206AQ9NX38 181 aa12.03□□□□□ -0.48
IRF3-229ENST00000601373 PLEK2Q9NYT0 353 aa12.03□□□□□ -0.48
IRF3-229ENST00000601373 FBXL3Q9UKT7 428 aa12.03□□□□□ -0.48
IRF3-229ENST00000601373 HHLA2Q9UM44 414 aa12.03□□□□□ -0.48
IRF3-229ENST00000601373 SLC22A13Q9Y226 551 aa12.03□□□□□ -0.48
IRF3-229ENST00000601373 NCOA6Q14686 2063 aaPredicted RBP12.02□□□□□ -0.48
IRF3-229ENST00000601373 FIGNL2A6NMB9 653 aa12.02□□□□□ -0.49
IRF3-229ENST00000601373 SGCEO43556 437 aa12.02□□□□□ -0.49
IRF3-229ENST00000601373 TMEM127O75204 238 aa12.02□□□□□ -0.49
IRF3-229ENST00000601373 IGHV3-9P01782 118 aa12.02□□□□□ -0.49
IRF3-229ENST00000601373 CRHP06850 196 aa12.02□□□□□ -0.49
IRF3-229ENST00000601373 CLEC2LP0C7M8 214 aa12.02□□□□□ -0.49
IRF3-229ENST00000601373 OCM2P0CE71 109 aa12.02□□□□□ -0.49
IRF3-229ENST00000601373 B4GALT1P15291 398 aa12.02□□□□□ -0.49
IRF3-229ENST00000601373 MPGP29372 298 aa12.02□□□□□ -0.49
IRF3-229ENST00000601373 MFGE8Q08431 387 aaPredicted RBP12.02□□□□□ -0.49
IRF3-229ENST00000601373 FAPQ12884 760 aa12.02□□□□□ -0.49
IRF3-229ENST00000601373 HNRNPA0Q13151 305 aaKnown RBP12.02□□□□□ -0.49
IRF3-229ENST00000601373 GUSBP1Q15486 140 aa12.02□□□□□ -0.49
IRF3-229ENST00000601373 SLC36A2Q495M3 483 aa12.02□□□□□ -0.49
IRF3-229ENST00000601373 LURAP1LQ8IV03 231 aa12.02□□□□□ -0.49
IRF3-229ENST00000601373 ZNF283Q8N7M2 679 aa12.02□□□□□ -0.49
IRF3-229ENST00000601373 OR6K3Q8NGY3 331 aa12.02□□□□□ -0.49
IRF3-229ENST00000601373 RGP1Q92546 391 aaPredicted RBP12.02□□□□□ -0.49
IRF3-229ENST00000601373 SPTSSAQ969W0 71 aa12.02□□□□□ -0.49
IRF3-229ENST00000601373 ZFP3Q96NJ6 502 aa12.02□□□□□ -0.49
IRF3-229ENST00000601373 DERL3Q96Q80 235 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms