RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 MT-ND5P03915 603 aa14.42□□□□□ -0.1
TRIM28-215ENST00000601150 DBHP09172 617 aa14.42□□□□□ -0.1
TRIM28-215ENST00000601150 PRR23D2P0DMB1 279 aaPredicted RBP14.42□□□□□ -0.1
TRIM28-215ENST00000601150 NAT2P11245 290 aa14.42□□□□□ -0.1
TRIM28-215ENST00000601150 DAOP14920 347 aa14.42□□□□□ -0.1
TRIM28-215ENST00000601150 SLC25A16P16260 332 aa14.42□□□□□ -0.1
TRIM28-215ENST00000601150 MPV17P39210 176 aa14.42□□□□□ -0.1
TRIM28-215ENST00000601150 RGS6P49758 472 aa14.42□□□□□ -0.1
TRIM28-215ENST00000601150 ENTPD1P49961 510 aa14.42□□□□□ -0.1
TRIM28-215ENST00000601150 CRISP1P54107 249 aa14.42□□□□□ -0.1
TRIM28-215ENST00000601150 ESRRGP62508 458 aa14.42□□□□□ -0.1
TRIM28-215ENST00000601150 ALKBH6Q3KRA9 238 aa14.42□□□□□ -0.1
TRIM28-215ENST00000601150 TMEM236Q5W0B7 351 aa14.42□□□□□ -0.1
TRIM28-215ENST00000601150 ZFP1Q6P2D0 407 aa14.42□□□□□ -0.1
TRIM28-215ENST00000601150 TMEM154Q6P9G4 183 aa14.42□□□□□ -0.1
TRIM28-215ENST00000601150 LYPD4Q6UWN0 246 aa14.42□□□□□ -0.1
TRIM28-215ENST00000601150 C10orf67Q8IYJ2 551 aa14.42□□□□□ -0.1
TRIM28-215ENST00000601150 ZNF511Q8NB15 262 aa14.42□□□□□ -0.1
TRIM28-215ENST00000601150 PLEKHA8Q96JA3 519 aa14.42□□□□□ -0.1
TRIM28-215ENST00000601150 RAB3IPQ96QF0 476 aaPredicted RBP14.42□□□□□ -0.1
TRIM28-215ENST00000601150 ATF6BQ99941 703 aa14.42□□□□□ -0.1
TRIM28-215ENST00000601150 SMR3AQ99954 134 aa14.42□□□□□ -0.1
TRIM28-215ENST00000601150 HCAR1Q9BXC0 346 aa14.42□□□□□ -0.1
TRIM28-215ENST00000601150 GSX1Q9H4S2 264 aaPredicted RBP14.42□□□□□ -0.1
TRIM28-215ENST00000601150 WDR76Q9H967 626 aa14.42□□□□□ -0.1
TRIM28-215ENST00000601150 HINT3Q9NQE9 182 aaKnown RBP14.42□□□□□ -0.1
TRIM28-215ENST00000601150 ZNF469Q96JG9 3925 aaPredicted RBP14.41□□□□□ -0.1
TRIM28-215ENST00000601150 LOC390937A0A1W2PQ73 354 aa14.41□□□□□ -0.1
TRIM28-215ENST00000601150 J3QW42 95 aa14.41□□□□□ -0.1
TRIM28-215ENST00000601150 SPARCP09486 303 aa14.41□□□□□ -0.1
TRIM28-215ENST00000601150 CARTPTQ16568 116 aa14.41□□□□□ -0.1
TRIM28-215ENST00000601150 TEX30Q5JUR7 227 aa14.41□□□□□ -0.1
TRIM28-215ENST00000601150 LINC01590Q5TEZ4 76 aa14.41□□□□□ -0.1
TRIM28-215ENST00000601150 KDM4DQ6B0I6 523 aa14.41□□□□□ -0.1
TRIM28-215ENST00000601150 PLBD1Q6P4A8 553 aa14.41□□□□□ -0.1
TRIM28-215ENST00000601150 CLEC9AQ6UXN8 241 aa14.41□□□□□ -0.1
TRIM28-215ENST00000601150 UBASH3BQ8TF42 649 aa14.41□□□□□ -0.1
TRIM28-215ENST00000601150 PTP4A1Q93096 173 aa14.41□□□□□ -0.1
TRIM28-215ENST00000601150 MAP6Q96JE9 813 aa14.41□□□□□ -0.1
TRIM28-215ENST00000601150 SEMA6AQ9H2E6 1030 aa14.41□□□□□ -0.1
TRIM28-215ENST00000601150 PNRC2Q9NPJ4 139 aaKnown RBP14.41□□□□□ -0.1
TRIM28-215ENST00000601150 STARD10Q9Y365 291 aa14.41□□□□□ -0.1
TRIM28-215ENST00000601150 C17orf100A8MU93 164 aa14.4□□□□□ -0.1
TRIM28-215ENST00000601150 ZNF593O00488 134 aaPredicted RBP14.4□□□□□ -0.1
TRIM28-215ENST00000601150 MITFO75030 526 aaPredicted RBP14.4□□□□□ -0.1
TRIM28-215ENST00000601150 GLCEO94923 617 aa14.4□□□□□ -0.1
TRIM28-215ENST00000601150 LY6G6DO95868 133 aa14.4□□□□□ -0.1
TRIM28-215ENST00000601150 GSTT1P30711 240 aa14.4□□□□□ -0.1
TRIM28-215ENST00000601150 RPS27P42677 84 aaKnown RBP14.4□□□□□ -0.1
TRIM28-215ENST00000601150 PTGES3Q15185 160 aaKnown RBP14.4□□□□□ -0.1
TRIM28-215ENST00000601150 PCK2Q16822 640 aa14.4□□□□□ -0.1
TRIM28-215ENST00000601150 RSPO1Q2MKA7 263 aaPredicted RBP14.4□□□□□ -0.1
TRIM28-215ENST00000601150 PCGF3Q3KNV8 242 aa14.4□□□□□ -0.1
TRIM28-215ENST00000601150 KRTAP27-1Q3LI81 207 aa14.4□□□□□ -0.1
TRIM28-215ENST00000601150 DCXRQ7Z4W1 244 aa14.4□□□□□ -0.1
TRIM28-215ENST00000601150 ZNF786Q8N393 782 aa14.4□□□□□ -0.1
TRIM28-215ENST00000601150 MAPK1IP1LQ8NDC0 245 aa14.4□□□□□ -0.1
TRIM28-215ENST00000601150 OR5L1Q8NGL2 311 aa14.4□□□□□ -0.1
TRIM28-215ENST00000601150 APOBEC3DQ96AK3 386 aaPredicted RBP14.4□□□□□ -0.1
TRIM28-215ENST00000601150 PIMREGQ9BSJ6 248 aa14.4□□□□□ -0.1
TRIM28-215ENST00000601150 OR51V1Q9H2C8 321 aa14.4□□□□□ -0.1
TRIM28-215ENST00000601150 POFUT1Q9H488 388 aa14.4□□□□□ -0.1
TRIM28-215ENST00000601150 CYSLTR2Q9NS75 346 aa14.4□□□□□ -0.1
TRIM28-215ENST00000601150 CGGBP1Q9UFW8 167 aaPredicted RBP14.4□□□□□ -0.1
TRIM28-215ENST00000601150 ENOPH1Q9UHY7 261 aa14.4□□□□□ -0.1
TRIM28-215ENST00000601150 OAZ3Q9UMX2 235 aa14.4□□□□□ -0.1
TRIM28-215ENST00000601150 PLSCR5A0PG75 271 aa14.39□□□□□ -0.11
TRIM28-215ENST00000601150 SAC3D1A6NKF1 404 aa14.39□□□□□ -0.11
TRIM28-215ENST00000601150 VWC2LB2RUY7 222 aa14.39□□□□□ -0.11
TRIM28-215ENST00000601150 H3BNX3 289 aa14.39□□□□□ -0.11
TRIM28-215ENST00000601150 PRODHO43272 600 aa14.39□□□□□ -0.11
TRIM28-215ENST00000601150 ACSM4P0C7M7 580 aa14.39□□□□□ -0.11
TRIM28-215ENST00000601150 PSKH1P11801 424 aa14.39□□□□□ -0.11
TRIM28-215ENST00000601150 LIPAP38571 399 aa14.39□□□□□ -0.11
TRIM28-215ENST00000601150 ZNF81P51508 661 aa14.39□□□□□ -0.11
TRIM28-215ENST00000601150 PSG7Q13046 419 aa14.39□□□□□ -0.11
TRIM28-215ENST00000601150 SNAPC1Q16533 368 aa14.39□□□□□ -0.11
TRIM28-215ENST00000601150 TMEM255AQ5JRV8 349 aa14.39□□□□□ -0.11
TRIM28-215ENST00000601150 CPOQ8IVL8 374 aa14.39□□□□□ -0.11
TRIM28-215ENST00000601150 OR10S1Q8NGN2 331 aa14.39□□□□□ -0.11
TRIM28-215ENST00000601150 SPTSSAQ969W0 71 aa14.39□□□□□ -0.11
TRIM28-215ENST00000601150 INTS14Q96SY0 518 aa14.39□□□□□ -0.11
TRIM28-215ENST00000601150 PKP2Q99959 881 aa14.39□□□□□ -0.11
TRIM28-215ENST00000601150 PRRG3Q9BZD7 231 aa14.39□□□□□ -0.11
TRIM28-215ENST00000601150 MARCH7Q9H992 704 aa14.39□□□□□ -0.11
TRIM28-215ENST00000601150 DDX28Q9NUL7 540 aaKnown RBP14.39□□□□□ -0.11
TRIM28-215ENST00000601150 NKIRAS2Q9NYR9 191 aa14.39□□□□□ -0.11
TRIM28-215ENST00000601150 TVP23BQ9NYZ1 205 aa14.39□□□□□ -0.11
TRIM28-215ENST00000601150 TMEFF2Q9UIK5 374 aaPredicted RBP14.39□□□□□ -0.11
TRIM28-215ENST00000601150 YLPM1P49750 1951 aaKnown RBP14.39□□□□□ -0.11
TRIM28-215ENST00000601150 MTORP42345 2549 aa14.38□□□□□ -0.11
TRIM28-215ENST00000601150 A0A096LNT2 108 aa14.38□□□□□ -0.11
TRIM28-215ENST00000601150 F5H5K5 113 aa14.38□□□□□ -0.11
TRIM28-215ENST00000601150 TIMM8AO60220 97 aaPredicted RBP14.38□□□□□ -0.11
TRIM28-215ENST00000601150 HPXP02790 462 aa14.38□□□□□ -0.11
TRIM28-215ENST00000601150 HEXAP06865 529 aa14.38□□□□□ -0.11
TRIM28-215ENST00000601150 IGFBP5P24593 272 aa14.38□□□□□ -0.11
TRIM28-215ENST00000601150 NR4A2P43354 598 aa14.38□□□□□ -0.11
TRIM28-215ENST00000601150 MAGEB1P43366 347 aa14.38□□□□□ -0.11
TRIM28-215ENST00000601150 MMP15P51511 669 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms