RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 H7C1C5 153 aa13.93□□□□□ -0.18
USE1-208ENST00000600970 PHYHO14832 338 aa13.93□□□□□ -0.18
USE1-208ENST00000600970 MLNRO43193 412 aa13.93□□□□□ -0.18
USE1-208ENST00000600970 SFTPBP07988 381 aa13.93□□□□□ -0.18
USE1-208ENST00000600970 PMELP40967 661 aa13.93□□□□□ -0.18
USE1-208ENST00000600970 RAP1BP61224 184 aa13.93□□□□□ -0.18
USE1-208ENST00000600970 MAGOHP61326 146 aaKnown RBP13.93□□□□□ -0.18
USE1-208ENST00000600970 LCN6P62502 163 aa13.93□□□□□ -0.18
USE1-208ENST00000600970 RAP1AP62834 184 aa13.93□□□□□ -0.18
USE1-208ENST00000600970 VMACQ2NL98 169 aa13.93□□□□□ -0.18
USE1-208ENST00000600970 FBXW12Q6X9E4 464 aa13.93□□□□□ -0.18
USE1-208ENST00000600970 C1orf87Q8N0U7 546 aa13.93□□□□□ -0.18
USE1-208ENST00000600970 DPP10Q8N608 796 aa13.93□□□□□ -0.18
USE1-208ENST00000600970 PCYOX1LQ8NBM8 494 aa13.93□□□□□ -0.18
USE1-208ENST00000600970 C7orf26Q96N11 449 aa13.93□□□□□ -0.18
USE1-208ENST00000600970 TCF7L1Q9HCS4 588 aa13.93□□□□□ -0.18
USE1-208ENST00000600970 PTTG3PQ9NZH4 202 aa13.93□□□□□ -0.18
USE1-208ENST00000600970 NDUFAF1Q9Y375 327 aa13.93□□□□□ -0.18
USE1-208ENST00000600970 CENPVL3A0A0U1RRI6 287 aa13.92□□□□□ -0.18
USE1-208ENST00000600970 LRRC30A6NM36 301 aa13.92□□□□□ -0.18
USE1-208ENST00000600970 F5H5P2 479 aa13.92□□□□□ -0.18
USE1-208ENST00000600970 P2RY10O00398 339 aa13.92□□□□□ -0.18
USE1-208ENST00000600970 ENSAO43768 121 aaKnown RBP13.92□□□□□ -0.18
USE1-208ENST00000600970 GPR137BO60478 399 aa13.92□□□□□ -0.18
USE1-208ENST00000600970 IFI30P13284 250 aa13.92□□□□□ -0.18
USE1-208ENST00000600970 MMP9P14780 707 aa13.92□□□□□ -0.18
USE1-208ENST00000600970 CFHR2P36980 270 aa13.92□□□□□ -0.18
USE1-208ENST00000600970 GZMMP51124 257 aa13.92□□□□□ -0.18
USE1-208ENST00000600970 DCDC5Q6ZRR9 648 aa13.92□□□□□ -0.18
USE1-208ENST00000600970 FAM110DQ8TAY7 271 aaPredicted RBP13.92□□□□□ -0.18
USE1-208ENST00000600970 TBC1D15Q8TC07 691 aa13.92□□□□□ -0.18
USE1-208ENST00000600970 LRRC8CQ8TDW0 803 aa13.92□□□□□ -0.18
USE1-208ENST00000600970 BPIFA2Q96DR5 249 aa13.92□□□□□ -0.18
USE1-208ENST00000600970 TBX15Q96SF7 602 aa13.92□□□□□ -0.18
USE1-208ENST00000600970 ACOXLQ9NUZ1 547 aa13.92□□□□□ -0.18
USE1-208ENST00000600970 J3QW42 95 aa13.91□□□□□ -0.18
USE1-208ENST00000600970 FBP2O00757 339 aa13.91□□□□□ -0.18
USE1-208ENST00000600970 TOX4O94842 621 aa13.91□□□□□ -0.18
USE1-208ENST00000600970 ALX3O95076 343 aa13.91□□□□□ -0.18
USE1-208ENST00000600970 DBHP09172 617 aa13.91□□□□□ -0.18
USE1-208ENST00000600970 OR1E2P47887 323 aa13.91□□□□□ -0.18
USE1-208ENST00000600970 FHL1Q13642 323 aa13.91□□□□□ -0.18
USE1-208ENST00000600970 MICU2Q8IYU8 434 aa13.91□□□□□ -0.18
USE1-208ENST00000600970 C19orf18Q8NEA5 215 aa13.91□□□□□ -0.18
USE1-208ENST00000600970 GATAD2BQ8WXI9 593 aa13.91□□□□□ -0.18
USE1-208ENST00000600970 ZNF582Q96NG8 517 aaPredicted RBP13.91□□□□□ -0.18
USE1-208ENST00000600970 KIF17Q9P2E2 1029 aa13.91□□□□□ -0.18
USE1-208ENST00000600970 BAG5Q9UL15 447 aa13.91□□□□□ -0.18
USE1-208ENST00000600970 TRAV27A0A087WT01 109 aa13.9□□□□□ -0.18
USE1-208ENST00000600970 OR6C6A6NF89 314 aa13.9□□□□□ -0.18
USE1-208ENST00000600970 IQCF6A8MYZ5 107 aa13.9□□□□□ -0.18
USE1-208ENST00000600970 ZNF879B4DU55 563 aa13.9□□□□□ -0.18
USE1-208ENST00000600970 IGHV4-59P01825 116 aa13.9□□□□□ -0.18
USE1-208ENST00000600970 PSMB10P40306 273 aa13.9□□□□□ -0.18
USE1-208ENST00000600970 AQP6Q13520 282 aa13.9□□□□□ -0.18
USE1-208ENST00000600970 NFYCQ13952 458 aa13.9□□□□□ -0.18
USE1-208ENST00000600970 CCDC92Q53HC0 331 aaPredicted RBP13.9□□□□□ -0.18
USE1-208ENST00000600970 OTPQ5XKR4 325 aa13.9□□□□□ -0.18
USE1-208ENST00000600970 BHLHE23Q8NDY6 225 aa13.9□□□□□ -0.18
USE1-208ENST00000600970 OR5L1Q8NGL2 311 aa13.9□□□□□ -0.18
USE1-208ENST00000600970 OR51A7Q8NH64 312 aa13.9□□□□□ -0.18
USE1-208ENST00000600970 OR1F12Q8NHA8 337 aa13.9□□□□□ -0.18
USE1-208ENST00000600970 RASD2Q96D21 266 aa13.9□□□□□ -0.18
USE1-208ENST00000600970 TECTBQ96PL2 329 aa13.9□□□□□ -0.18
USE1-208ENST00000600970 IGHV1-69DA0A0B4J2H0 117 aa13.89□□□□□ -0.19
USE1-208ENST00000600970 A0A1B0GWJ7 208 aa13.89□□□□□ -0.19
USE1-208ENST00000600970 HTR3EA5X5Y0 456 aa13.89□□□□□ -0.19
USE1-208ENST00000600970 ANGPT2O15123 496 aa13.89□□□□□ -0.19
USE1-208ENST00000600970 IGHV1-69P01742 117 aa13.89□□□□□ -0.19
USE1-208ENST00000600970 IRF2P14316 349 aa13.89□□□□□ -0.19
USE1-208ENST00000600970 FUT4P22083 530 aa13.89□□□□□ -0.19
USE1-208ENST00000600970 IER3P46695 156 aa13.89□□□□□ -0.19
USE1-208ENST00000600970 RGS6P49758 472 aa13.89□□□□□ -0.19
USE1-208ENST00000600970 NPY4RP50391 375 aa13.89□□□□□ -0.19
USE1-208ENST00000600970 Q6ZSV7 163 aa13.89□□□□□ -0.19
USE1-208ENST00000600970 ZSCAN4Q8NAM6 433 aaPredicted RBP13.89□□□□□ -0.19
USE1-208ENST00000600970 TLCD1Q96CP7 247 aa13.89□□□□□ -0.19
USE1-208ENST00000600970 WDFY2Q96P53 400 aa13.89□□□□□ -0.19
USE1-208ENST00000600970 TRIM15Q9C019 465 aa13.89□□□□□ -0.19
USE1-208ENST00000600970 RABEP2Q9H5N1 569 aa13.89□□□□□ -0.19
USE1-208ENST00000600970 TMEM100Q9NV29 134 aa13.89□□□□□ -0.19
USE1-208ENST00000600970 CTSZQ9UBR2 303 aa13.89□□□□□ -0.19
USE1-208ENST00000600970 TMCC3Q9ULS5 477 aa13.89□□□□□ -0.19
USE1-208ENST00000600970 TEX13CA0A0J9YWL9 993 aa13.88□□□□□ -0.19
USE1-208ENST00000600970 HLA-DPB1P04440 258 aa13.88□□□□□ -0.19
USE1-208ENST00000600970 LIPFP07098 398 aa13.88□□□□□ -0.19
USE1-208ENST00000600970 FPR3P25089 353 aa13.88□□□□□ -0.19
USE1-208ENST00000600970 GATA4P43694 442 aa13.88□□□□□ -0.19
USE1-208ENST00000600970 HOXA4Q00056 320 aaPredicted RBP13.88□□□□□ -0.19
USE1-208ENST00000600970 ST3GAL3Q11203 375 aa13.88□□□□□ -0.19
USE1-208ENST00000600970 MAB21L1Q13394 359 aa13.88□□□□□ -0.19
USE1-208ENST00000600970 C2orf68Q2NKX9 166 aa13.88□□□□□ -0.19
USE1-208ENST00000600970 BEAN1Q3B7T3 259 aa13.88□□□□□ -0.19
USE1-208ENST00000600970 MESTQ5EB52 335 aa13.88□□□□□ -0.19
USE1-208ENST00000600970 CD276Q5ZPR3 534 aa13.88□□□□□ -0.19
USE1-208ENST00000600970 OAFQ86UD1 273 aa13.88□□□□□ -0.19
USE1-208ENST00000600970 LDLRAD3Q86YD5 345 aa13.88□□□□□ -0.19
USE1-208ENST00000600970 Q8TCH9 128 aa13.88□□□□□ -0.19
USE1-208ENST00000600970 LHX4Q969G2 390 aa13.88□□□□□ -0.19
USE1-208ENST00000600970 APOBEC3DQ96AK3 386 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms