RNA–Protein interactions for RNA: ENST00000600948.5

PLD3-223, Transcript of phospholipase D family member 3, human

TSL 2

Gene PLD3, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-223	ENST00000600948	FAM209A	Q5JX71	171 aa		13.17	□□□□□ -0.3
PLD3-223	ENST00000600948	FAM166A	Q6J272	317 aa		13.17	□□□□□ -0.3
PLD3-223	ENST00000600948	CD300LD	Q6UXZ3	194 aa		13.17	□□□□□ -0.3
PLD3-223	ENST00000600948	CFAP77	Q6ZQR2	320 aa		13.17	□□□□□ -0.3
PLD3-223	ENST00000600948	TMEM179B	Q7Z7N9	219 aa		13.17	□□□□□ -0.3
PLD3-223	ENST00000600948	LINC00346	Q8IVM7	164 aa		13.17	□□□□□ -0.3
PLD3-223	ENST00000600948	SLC37A3	Q8NCC5	494 aa		13.17	□□□□□ -0.3
PLD3-223	ENST00000600948	GIPC3	Q8TF64	312 aa		13.17	□□□□□ -0.3
PLD3-223	ENST00000600948	ZNRF4	Q8WWF5	429 aa		13.17	□□□□□ -0.3
PLD3-223	ENST00000600948	C1orf159	Q96HA4	380 aa		13.17	□□□□□ -0.3
PLD3-223	ENST00000600948	CYSLTR2	Q9NS75	346 aa		13.17	□□□□□ -0.3
PLD3-223	ENST00000600948	CYB5R1	Q9UHQ9	305 aa		13.17	□□□□□ -0.3
PLD3-223	ENST00000600948	BAIAP2	Q9UQB8	552 aa		13.17	□□□□□ -0.3
PLD3-223	ENST00000600948	POMP	Q9Y244	141 aa		13.17	□□□□□ -0.3
PLD3-223	ENST00000600948	DYSF	O75923	2080 aa		13.17	□□□□□ -0.3
PLD3-223	ENST00000600948	IGHV1-69-2	A0A0G2JMI3	117 aa		13.16	□□□□□ -0.3
PLD3-223	ENST00000600948	TCRBV3S1	A0A5B6	114 aa		13.16	□□□□□ -0.3
PLD3-223	ENST00000600948	ARRDC5	A6NEK1	342 aa		13.16	□□□□□ -0.3
PLD3-223	ENST00000600948	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	13.16	□□□□□ -0.3
PLD3-223	ENST00000600948		J3QW42	95 aa		13.16	□□□□□ -0.3
PLD3-223	ENST00000600948	TIMM8A	O60220	97 aa	Predicted RBP	13.16	□□□□□ -0.3
PLD3-223	ENST00000600948	CDC14B	O60729	498 aa		13.16	□□□□□ -0.3
PLD3-223	ENST00000600948	HLA-DQA2	P01906	255 aa		13.16	□□□□□ -0.3
PLD3-223	ENST00000600948	HOXB6	P17509	224 aa	Known RBP	13.16	□□□□□ -0.3
PLD3-223	ENST00000600948	KITLG	P21583	273 aa		13.16	□□□□□ -0.3
PLD3-223	ENST00000600948	IGFBP5	P24593	272 aa		13.16	□□□□□ -0.3
PLD3-223	ENST00000600948	GGT2	P36268	569 aa		13.16	□□□□□ -0.3
PLD3-223	ENST00000600948	LIPA	P38571	399 aa		13.16	□□□□□ -0.3
PLD3-223	ENST00000600948	RGS6	P49758	472 aa		13.16	□□□□□ -0.3
PLD3-223	ENST00000600948	BNIP1	Q12981	228 aa		13.16	□□□□□ -0.3
PLD3-223	ENST00000600948	CRMP1	Q14194	572 aa		13.16	□□□□□ -0.3
PLD3-223	ENST00000600948	RSPO1	Q2MKA7	263 aa	Predicted RBP	13.16	□□□□□ -0.3
PLD3-223	ENST00000600948	KRTAP27-1	Q3LI81	207 aa		13.16	□□□□□ -0.3
PLD3-223	ENST00000600948	CHRFAM7A	Q494W8	412 aa		13.16	□□□□□ -0.3
PLD3-223	ENST00000600948	USP51	Q70EK9	711 aa		13.16	□□□□□ -0.3
PLD3-223	ENST00000600948	SPATA24	Q86W54	205 aa		13.16	□□□□□ -0.3
PLD3-223	ENST00000600948	OR2T33	Q8NG76	320 aa		13.16	□□□□□ -0.3
PLD3-223	ENST00000600948	OR2T4	Q8NH00	348 aa		13.16	□□□□□ -0.3
PLD3-223	ENST00000600948	CLDND2	Q8NHS1	167 aa		13.16	□□□□□ -0.3
PLD3-223	ENST00000600948	COG8	Q96MW5	612 aa		13.16	□□□□□ -0.3
PLD3-223	ENST00000600948	FEV	Q99581	238 aa		13.16	□□□□□ -0.3
PLD3-223	ENST00000600948	RBM4	Q9BWF3	364 aa	Known RBP	13.16	□□□□□ -0.3
PLD3-223	ENST00000600948	SAP30L	Q9HAJ7	183 aa		13.16	□□□□□ -0.3
PLD3-223	ENST00000600948	MSL2	Q9HCI7	577 aa		13.16	□□□□□ -0.3
PLD3-223	ENST00000600948	PNRC2	Q9NPJ4	139 aa	Known RBP	13.16	□□□□□ -0.3
PLD3-223	ENST00000600948	DECR2	Q9NUI1	292 aa		13.16	□□□□□ -0.3
PLD3-223	ENST00000600948	KCNG2	Q9UJ96	466 aa		13.16	□□□□□ -0.3
PLD3-223	ENST00000600948	PURG	Q9UJV8	347 aa	Known RBP	13.16	□□□□□ -0.3
PLD3-223	ENST00000600948	CDC42EP3	Q9UKI2	254 aa		13.16	□□□□□ -0.3
PLD3-223	ENST00000600948	KCNS2	Q9ULS6	477 aa		13.16	□□□□□ -0.3
PLD3-223	ENST00000600948	WNT9B	O14905	357 aa		13.15	□□□□□ -0.3
PLD3-223	ENST00000600948	GSC2	O15499	205 aa		13.15	□□□□□ -0.3
PLD3-223	ENST00000600948	TPD52L2	O43399	206 aa	Known RBP	13.15	□□□□□ -0.3
PLD3-223	ENST00000600948	PPIH	O43447	177 aa	Known RBP	13.15	□□□□□ -0.3
PLD3-223	ENST00000600948	TGFA	P01135	160 aa		13.15	□□□□□ -0.3
PLD3-223	ENST00000600948	CD55	P08174	381 aa		13.15	□□□□□ -0.3
PLD3-223	ENST00000600948	ERF	P50548	548 aa		13.15	□□□□□ -0.3
PLD3-223	ENST00000600948	CDH15	P55291	814 aa		13.15	□□□□□ -0.3
PLD3-223	ENST00000600948	CCNI	Q14094	377 aa		13.15	□□□□□ -0.3
PLD3-223	ENST00000600948	ZMAT1	Q5H9K5	638 aa		13.15	□□□□□ -0.3
PLD3-223	ENST00000600948	LYPD4	Q6UWN0	246 aa		13.15	□□□□□ -0.3
PLD3-223	ENST00000600948	PAPD5	Q8NDF8	572 aa	Known RBP	13.15	□□□□□ -0.3
PLD3-223	ENST00000600948	PROKR2	Q8NFJ6	384 aa		13.15	□□□□□ -0.3
PLD3-223	ENST00000600948	OR9Q1	Q8NGQ5	310 aa		13.15	□□□□□ -0.3
PLD3-223	ENST00000600948	HAVCR1	Q96D42	359 aa		13.15	□□□□□ -0.3
PLD3-223	ENST00000600948	CMBL	Q96DG6	245 aa		13.15	□□□□□ -0.3
PLD3-223	ENST00000600948	DIRC2	Q96SL1	478 aa		13.15	□□□□□ -0.3
PLD3-223	ENST00000600948	PITX2	Q99697	317 aa		13.15	□□□□□ -0.3
PLD3-223	ENST00000600948	CADM1	Q9BY67	442 aa	Known RBP	13.15	□□□□□ -0.3
PLD3-223	ENST00000600948	NMNAT2	Q9BZQ4	307 aa		13.15	□□□□□ -0.3
PLD3-223	ENST00000600948	NARFL	Q9H6Q4	476 aa		13.15	□□□□□ -0.3
PLD3-223	ENST00000600948	ZDHHC8	Q9ULC8	765 aa		13.15	□□□□□ -0.3
PLD3-223	ENST00000600948	CACNG2	Q9Y698	323 aa		13.15	□□□□□ -0.3
PLD3-223	ENST00000600948	ATR	Q13535	2644 aa		13.14	□□□□□ -0.31
PLD3-223	ENST00000600948	TVP23A	A6NH52	213 aa		13.14	□□□□□ -0.31
PLD3-223	ENST00000600948	GNGT2	O14610	69 aa		13.14	□□□□□ -0.31
PLD3-223	ENST00000600948	FKBP6	O75344	327 aa		13.14	□□□□□ -0.31
PLD3-223	ENST00000600948	PSKH1	P11801	424 aa		13.14	□□□□□ -0.31
PLD3-223	ENST00000600948	RAC2	P15153	192 aa		13.14	□□□□□ -0.31
PLD3-223	ENST00000600948	RPS27	P42677	84 aa	Known RBP	13.14	□□□□□ -0.31
PLD3-223	ENST00000600948	SLC25A1	P53007	311 aa		13.14	□□□□□ -0.31
PLD3-223	ENST00000600948	CBX1	P83916	185 aa		13.14	□□□□□ -0.31
PLD3-223	ENST00000600948	ECH1	Q13011	328 aa		13.14	□□□□□ -0.31
PLD3-223	ENST00000600948	CDK5R2	Q13319	367 aa		13.14	□□□□□ -0.31
PLD3-223	ENST00000600948	SPRN	Q5BIV9	151 aa		13.14	□□□□□ -0.31
PLD3-223	ENST00000600948	FBXW12	Q6X9E4	464 aa		13.14	□□□□□ -0.31
PLD3-223	ENST00000600948		Q6ZR03	302 aa		13.14	□□□□□ -0.31
PLD3-223	ENST00000600948	COLCA1	Q6ZS62	124 aa		13.14	□□□□□ -0.31
PLD3-223	ENST00000600948	LINC01356	Q8N9X3	169 aa		13.14	□□□□□ -0.31
PLD3-223	ENST00000600948	OR51L1	Q8NGJ5	315 aa		13.14	□□□□□ -0.31
PLD3-223	ENST00000600948	OR10S1	Q8NGN2	331 aa		13.14	□□□□□ -0.31
PLD3-223	ENST00000600948	OR2AJ1	Q8NGZ0	328 aa		13.14	□□□□□ -0.31
PLD3-223	ENST00000600948	PTP4A1	Q93096	173 aa		13.14	□□□□□ -0.31
PLD3-223	ENST00000600948	APOBEC3D	Q96AK3	386 aa	Predicted RBP	13.14	□□□□□ -0.31
PLD3-223	ENST00000600948	ELMOD3	Q96FG2	381 aa		13.14	□□□□□ -0.31
PLD3-223	ENST00000600948	MAP6	Q96JE9	813 aa		13.14	□□□□□ -0.31
PLD3-223	ENST00000600948	ATF6B	Q99941	703 aa		13.14	□□□□□ -0.31
PLD3-223	ENST00000600948	CDADC1	Q9BWV3	514 aa		13.14	□□□□□ -0.31
PLD3-223	ENST00000600948	PTTG3P	Q9NZH4	202 aa		13.14	□□□□□ -0.31
PLD3-223	ENST00000600948	PDP1	Q9P0J1	537 aa	Predicted RBP	13.14	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms