RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, human

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSBP4-208	ENST00000600628	SLC25A19	Q9HC21	320 aa		7.49	□□□□□ -1.21
SSBP4-208	ENST00000600628	TBC1D23	Q9NUY8	699 aa		7.49	□□□□□ -1.21
SSBP4-208	ENST00000600628	PDP1	Q9P0J1	537 aa	Predicted RBP	7.49	□□□□□ -1.21
SSBP4-208	ENST00000600628	TAAR3P	Q9P1P4	343 aa		7.49	□□□□□ -1.21
SSBP4-208	ENST00000600628	CGGBP1	Q9UFW8	167 aa	Predicted RBP	7.49	□□□□□ -1.21
SSBP4-208	ENST00000600628	FZR1	Q9UM11	496 aa		7.49	□□□□□ -1.21
SSBP4-208	ENST00000600628	STARD10	Q9Y365	291 aa		7.49	□□□□□ -1.21
SSBP4-208	ENST00000600628	COMMD3-BMI1	R4GMX3	469 aa		7.49	□□□□□ -1.21
SSBP4-208	ENST00000600628	COL6A5	A8TX70	2615 aa		7.48	□□□□□ -1.21
SSBP4-208	ENST00000600628	DYSF	O75923	2080 aa		7.48	□□□□□ -1.21
SSBP4-208	ENST00000600628		H3BNX3	289 aa		7.48	□□□□□ -1.21
SSBP4-208	ENST00000600628	SURF4	O15260	269 aa		7.48	□□□□□ -1.21
SSBP4-208	ENST00000600628	TLX2	O43763	284 aa	Predicted RBP	7.48	□□□□□ -1.21
SSBP4-208	ENST00000600628	TIPRL	O75663	272 aa		7.48	□□□□□ -1.21
SSBP4-208	ENST00000600628	LCK	P06239	509 aa		7.48	□□□□□ -1.21
SSBP4-208	ENST00000600628	ERCC1	P07992	297 aa	Predicted RBP	7.48	□□□□□ -1.21
SSBP4-208	ENST00000600628	ACSM4	P0C7M7	580 aa		7.48	□□□□□ -1.21
SSBP4-208	ENST00000600628	CLU	P10909	449 aa		7.48	□□□□□ -1.21
SSBP4-208	ENST00000600628	DAO	P14920	347 aa		7.48	□□□□□ -1.21
SSBP4-208	ENST00000600628	USF1	P22415	310 aa	Predicted RBP	7.48	□□□□□ -1.21
SSBP4-208	ENST00000600628	PYCR1	P32322	319 aa		7.48	□□□□□ -1.21
SSBP4-208	ENST00000600628	HTR5A	P47898	357 aa		7.48	□□□□□ -1.21
SSBP4-208	ENST00000600628	CENPA	P49450	140 aa		7.48	□□□□□ -1.21
SSBP4-208	ENST00000600628	RGS6	P49758	472 aa		7.48	□□□□□ -1.21
SSBP4-208	ENST00000600628	ECH1	Q13011	328 aa		7.48	□□□□□ -1.21
SSBP4-208	ENST00000600628	CDK5R2	Q13319	367 aa		7.48	□□□□□ -1.21
SSBP4-208	ENST00000600628	MAD2L1BP	Q15013	274 aa	Predicted RBP	7.48	□□□□□ -1.21
SSBP4-208	ENST00000600628	TMEM249	Q2WGJ8	235 aa		7.48	□□□□□ -1.21
SSBP4-208	ENST00000600628	PCGF3	Q3KNV8	242 aa		7.48	□□□□□ -1.21
SSBP4-208	ENST00000600628	ALKBH6	Q3KRA9	238 aa		7.48	□□□□□ -1.21
SSBP4-208	ENST00000600628	ZNF718	Q3SXZ3	478 aa		7.48	□□□□□ -1.21
SSBP4-208	ENST00000600628	FAM209A	Q5JX71	171 aa		7.48	□□□□□ -1.21
SSBP4-208	ENST00000600628	SLC27A4	Q6P1M0	643 aa		7.48	□□□□□ -1.21
SSBP4-208	ENST00000600628	CORO6	Q6QEF8	472 aa		7.48	□□□□□ -1.21
SSBP4-208	ENST00000600628	UNQ6126/PRO20091	Q6UXV3	157 aa		7.48	□□□□□ -1.21
SSBP4-208	ENST00000600628		Q6ZR03	302 aa		7.48	□□□□□ -1.21
SSBP4-208	ENST00000600628	TIGD4	Q8IY51	512 aa		7.48	□□□□□ -1.21
SSBP4-208	ENST00000600628	OR2T4	Q8NH00	348 aa		7.48	□□□□□ -1.21
SSBP4-208	ENST00000600628	OR5K1	Q8NHB7	308 aa		7.48	□□□□□ -1.21
SSBP4-208	ENST00000600628	UBASH3B	Q8TF42	649 aa		7.48	□□□□□ -1.21
SSBP4-208	ENST00000600628	GTF3A	Q92664	365 aa	Known RBP	7.48	□□□□□ -1.21
SSBP4-208	ENST00000600628	YIPF5	Q969M3	257 aa		7.48	□□□□□ -1.21
SSBP4-208	ENST00000600628	WDR76	Q9H967	626 aa		7.48	□□□□□ -1.21
SSBP4-208	ENST00000600628	DYNLRB1	Q9NP97	96 aa		7.48	□□□□□ -1.21
SSBP4-208	ENST00000600628	HINT3	Q9NQE9	182 aa	Known RBP	7.48	□□□□□ -1.21
SSBP4-208	ENST00000600628	PLEK2	Q9NYT0	353 aa		7.48	□□□□□ -1.21
SSBP4-208	ENST00000600628	DUSP13	Q9UII6	198 aa		7.48	□□□□□ -1.21
SSBP4-208	ENST00000600628	TMEFF2	Q9UIK5	374 aa	Predicted RBP	7.48	□□□□□ -1.21
SSBP4-208	ENST00000600628	AP4S1	Q9Y587	144 aa		7.48	□□□□□ -1.21
SSBP4-208	ENST00000600628	WNK2	Q9Y3S1	2297 aa		7.47	□□□□□ -1.21
SSBP4-208	ENST00000600628	IGHV4-61	A0A0C4DH41	118 aa		7.47	□□□□□ -1.21
SSBP4-208	ENST00000600628	ZSCAN5B	A6NJL1	495 aa		7.47	□□□□□ -1.21
SSBP4-208	ENST00000600628	ABHD16A	O95870	558 aa		7.47	□□□□□ -1.21
SSBP4-208	ENST00000600628	IGHV1-46	P01743	117 aa		7.47	□□□□□ -1.21
SSBP4-208	ENST00000600628	NAT2	P11245	290 aa		7.47	□□□□□ -1.21
SSBP4-208	ENST00000600628	RAC2	P15153	192 aa		7.47	□□□□□ -1.21
SSBP4-208	ENST00000600628	ZNF23	P17027	643 aa		7.47	□□□□□ -1.21
SSBP4-208	ENST00000600628	ACHE	P22303	614 aa		7.47	□□□□□ -1.21
SSBP4-208	ENST00000600628	COL8A2	P25067	703 aa		7.47	□□□□□ -1.21
SSBP4-208	ENST00000600628	EPHA2	P29317	976 aa		7.47	□□□□□ -1.21
SSBP4-208	ENST00000600628	LIPA	P38571	399 aa		7.47	□□□□□ -1.21
SSBP4-208	ENST00000600628	CRYBB2	P43320	205 aa		7.47	□□□□□ -1.21
SSBP4-208	ENST00000600628	BLVRA	P53004	296 aa		7.47	□□□□□ -1.21
SSBP4-208	ENST00000600628	TMEM33	P57088	247 aa		7.47	□□□□□ -1.21
SSBP4-208	ENST00000600628	GINS1	Q14691	196 aa		7.47	□□□□□ -1.21
SSBP4-208	ENST00000600628	MOG	Q16653	247 aa		7.47	□□□□□ -1.21
SSBP4-208	ENST00000600628	SPATA46	Q5T0L3	261 aa		7.47	□□□□□ -1.21
SSBP4-208	ENST00000600628	PRSS45	Q7RTY3	260 aa		7.47	□□□□□ -1.21
SSBP4-208	ENST00000600628	IQCF1	Q8N6M8	205 aa		7.47	□□□□□ -1.21
SSBP4-208	ENST00000600628	ZNF511	Q8NB15	262 aa		7.47	□□□□□ -1.21
SSBP4-208	ENST00000600628	ZNF540	Q8NDQ6	660 aa		7.47	□□□□□ -1.21
SSBP4-208	ENST00000600628	ABHD4	Q8TB40	342 aa		7.47	□□□□□ -1.21
SSBP4-208	ENST00000600628	TEX47	Q8TBZ9	253 aa		7.47	□□□□□ -1.21
SSBP4-208	ENST00000600628	RDH5	Q92781	318 aa		7.47	□□□□□ -1.21
SSBP4-208	ENST00000600628	APOBEC3D	Q96AK3	386 aa	Predicted RBP	7.47	□□□□□ -1.21
SSBP4-208	ENST00000600628	ATF6B	Q99941	703 aa		7.47	□□□□□ -1.21
SSBP4-208	ENST00000600628	PIMREG	Q9BSJ6	248 aa		7.47	□□□□□ -1.21
SSBP4-208	ENST00000600628	BPESC1	Q9GZL8	116 aa		7.47	□□□□□ -1.21
SSBP4-208	ENST00000600628	TPK1	Q9H3S4	243 aa		7.47	□□□□□ -1.21
SSBP4-208	ENST00000600628	YAE1D1	Q9NRH1	226 aa		7.47	□□□□□ -1.21
SSBP4-208	ENST00000600628	TMEM160	Q9NX00	188 aa		7.47	□□□□□ -1.21
SSBP4-208	ENST00000600628	EIF3K	Q9UBQ5	218 aa	Known RBP	7.47	□□□□□ -1.21
SSBP4-208	ENST00000600628	GPR160	Q9UJ42	338 aa		7.47	□□□□□ -1.21
SSBP4-208	ENST00000600628	RIIAD1	A6NNX1	92 aa		7.46	□□□□□ -1.22
SSBP4-208	ENST00000600628	ZAR1L	A6NP61	321 aa		7.46	□□□□□ -1.22
SSBP4-208	ENST00000600628	LYNX1	G3V0Z9	82 aa		7.46	□□□□□ -1.22
SSBP4-208	ENST00000600628	PRODH	O43272	600 aa		7.46	□□□□□ -1.22
SSBP4-208	ENST00000600628	CRLF1	O75462	422 aa		7.46	□□□□□ -1.22
SSBP4-208	ENST00000600628	GLCE	O94923	617 aa		7.46	□□□□□ -1.22
SSBP4-208	ENST00000600628	PTBP3	O95758	552 aa	Known RBP	7.46	□□□□□ -1.22
SSBP4-208	ENST00000600628	IFNG	P01579	166 aa		7.46	□□□□□ -1.22
SSBP4-208	ENST00000600628	HMGN1	P05114	100 aa		7.46	□□□□□ -1.22
SSBP4-208	ENST00000600628	GYPB	P06028	91 aa		7.46	□□□□□ -1.22
SSBP4-208	ENST00000600628	IGHV4-31	P0DP07	118 aa		7.46	□□□□□ -1.22
SSBP4-208	ENST00000600628	LYNX1	P0DP58	116 aa		7.46	□□□□□ -1.22
SSBP4-208	ENST00000600628	ZNF3	P17036	446 aa		7.46	□□□□□ -1.22
SSBP4-208	ENST00000600628	CCNO	P22674	350 aa		7.46	□□□□□ -1.22
SSBP4-208	ENST00000600628	FMO3	P31513	532 aa		7.46	□□□□□ -1.22
SSBP4-208	ENST00000600628	RPS27	P42677	84 aa	Known RBP	7.46	□□□□□ -1.22
SSBP4-208	ENST00000600628	MAGEB1	P43366	347 aa		7.46	□□□□□ -1.22

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