RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 RNF223E7ERA6 249 aa13.02□□□□□ -0.33
LIG1-219ENST00000600055 GLCEO94923 617 aa13.02□□□□□ -0.33
LIG1-219ENST00000600055 SPARCP09486 303 aa13.02□□□□□ -0.33
LIG1-219ENST00000600055 PAICSP22234 425 aaKnown RBP13.02□□□□□ -0.33
LIG1-219ENST00000600055 IGFBP5P24593 272 aa13.02□□□□□ -0.33
LIG1-219ENST00000600055 GSTT1P30711 240 aa13.02□□□□□ -0.33
LIG1-219ENST00000600055 POLR2IP36954 125 aaKnown RBP13.02□□□□□ -0.33
LIG1-219ENST00000600055 ENTPD1P49961 510 aa13.02□□□□□ -0.33
LIG1-219ENST00000600055 SELENOVP59797 346 aa13.02□□□□□ -0.33
LIG1-219ENST00000600055 PPP2R2BQ00005 443 aa13.02□□□□□ -0.33
LIG1-219ENST00000600055 SNAPC1Q16533 368 aa13.02□□□□□ -0.33
LIG1-219ENST00000600055 NKPD1Q17RQ9 610 aa13.02□□□□□ -0.33
LIG1-219ENST00000600055 ZNF718Q3SXZ3 478 aa13.02□□□□□ -0.33
LIG1-219ENST00000600055 KLHL12Q53G59 568 aa13.02□□□□□ -0.33
LIG1-219ENST00000600055 ARL9Q6T311 187 aa13.02□□□□□ -0.33
LIG1-219ENST00000600055 DCXRQ7Z4W1 244 aa13.02□□□□□ -0.33
LIG1-219ENST00000600055 MAPK1IP1LQ8NDC0 245 aa13.02□□□□□ -0.33
LIG1-219ENST00000600055 KLF14Q8TD94 323 aaPredicted RBP13.02□□□□□ -0.33
LIG1-219ENST00000600055 ZMYND19Q96E35 227 aaPredicted RBP13.02□□□□□ -0.33
LIG1-219ENST00000600055 PLEKHA8Q96JA3 519 aa13.02□□□□□ -0.33
LIG1-219ENST00000600055 C18orf12Q96KH6 178 aa13.02□□□□□ -0.33
LIG1-219ENST00000600055 ATF6BQ99941 703 aa13.02□□□□□ -0.33
LIG1-219ENST00000600055 GSX1Q9H4S2 264 aaPredicted RBP13.02□□□□□ -0.33
LIG1-219ENST00000600055 S100A14Q9HCY8 104 aa13.02□□□□□ -0.33
LIG1-219ENST00000600055 TBCCD1Q9NVR7 557 aa13.02□□□□□ -0.33
LIG1-219ENST00000600055 ATPIF1Q9UII2 106 aa13.02□□□□□ -0.33
LIG1-219ENST00000600055 FBXO9Q9UK97 447 aaPredicted RBP13.02□□□□□ -0.33
LIG1-219ENST00000600055 ARFGEF3Q5TH69 2177 aa13.02□□□□□ -0.33
LIG1-219ENST00000600055 RTTNQ86VV8 2226 aa13.02□□□□□ -0.33
LIG1-219ENST00000600055 F5H5K5 113 aa13.01□□□□□ -0.33
LIG1-219ENST00000600055 PRKYO43930 277 aa13.01□□□□□ -0.33
LIG1-219ENST00000600055 IGHV3-13P01766 116 aa13.01□□□□□ -0.33
LIG1-219ENST00000600055 GCH1P30793 250 aa13.01□□□□□ -0.33
LIG1-219ENST00000600055 PCK2Q16822 640 aa13.01□□□□□ -0.33
LIG1-219ENST00000600055 KRTAP27-1Q3LI81 207 aa13.01□□□□□ -0.33
LIG1-219ENST00000600055 MBNL2Q5VZF2 373 aaKnown RBP13.01□□□□□ -0.33
LIG1-219ENST00000600055 CLEC2AQ6UVW9 174 aa13.01□□□□□ -0.33
LIG1-219ENST00000600055 UNQ6126/PRO20091Q6UXV3 157 aa13.01□□□□□ -0.33
LIG1-219ENST00000600055 CXXC5Q7LFL8 322 aaKnown RBP13.01□□□□□ -0.33
LIG1-219ENST00000600055 BCDIN3DQ7Z5W3 292 aaKnown RBP13.01□□□□□ -0.33
LIG1-219ENST00000600055 NAA40Q86UY6 237 aa13.01□□□□□ -0.33
LIG1-219ENST00000600055 ERI1Q8IV48 349 aaKnown RBP13.01□□□□□ -0.33
LIG1-219ENST00000600055 COX4I2Q96KJ9 171 aa13.01□□□□□ -0.33
LIG1-219ENST00000600055 INTS14Q96SY0 518 aa13.01□□□□□ -0.33
LIG1-219ENST00000600055 RHNO1Q9BSD3 238 aa13.01□□□□□ -0.33
LIG1-219ENST00000600055 OSBPL10Q9BXB5 764 aa13.01□□□□□ -0.33
LIG1-219ENST00000600055 TEX12Q9BXU0 123 aa13.01□□□□□ -0.33
LIG1-219ENST00000600055 REG4Q9BYZ8 158 aa13.01□□□□□ -0.33
LIG1-219ENST00000600055 F8P00451 2351 aa13.01□□□□□ -0.33
LIG1-219ENST00000600055 ZAR1LA6NP61 321 aa13□□□□□ -0.33
LIG1-219ENST00000600055 ANKRD65E5RJM6 399 aa13□□□□□ -0.33
LIG1-219ENST00000600055 LYNX1G3V0Z9 82 aa13□□□□□ -0.33
LIG1-219ENST00000600055 SELENOFO60613 162 aa13□□□□□ -0.33
LIG1-219ENST00000600055 INHBBP09529 407 aa13□□□□□ -0.33
LIG1-219ENST00000600055 ACSM4P0C7M7 580 aa13□□□□□ -0.33
LIG1-219ENST00000600055 LYNX1P0DP58 116 aa13□□□□□ -0.33
LIG1-219ENST00000600055 FOSL1P15407 271 aa13□□□□□ -0.33
LIG1-219ENST00000600055 SLC2A5P22732 501 aa13□□□□□ -0.33
LIG1-219ENST00000600055 BLVRAP53004 296 aa13□□□□□ -0.33
LIG1-219ENST00000600055 CARTPTQ16568 116 aa13□□□□□ -0.33
LIG1-219ENST00000600055 TEX30Q5JUR7 227 aa13□□□□□ -0.33
LIG1-219ENST00000600055 SLX4IPQ5VYV7 408 aa13□□□□□ -0.33
LIG1-219ENST00000600055 SPATC1Q76KD6 591 aa13□□□□□ -0.33
LIG1-219ENST00000600055 TIGD4Q8IY51 512 aa13□□□□□ -0.33
LIG1-219ENST00000600055 OR6N2Q8NGY6 317 aa13□□□□□ -0.33
LIG1-219ENST00000600055 C10orf105Q8TEF2 133 aa13□□□□□ -0.33
LIG1-219ENST00000600055 NEU4Q8WWR8 484 aaPredicted RBP13□□□□□ -0.33
LIG1-219ENST00000600055 FAM168AQ92567 244 aa13□□□□□ -0.33
LIG1-219ENST00000600055 STMN2Q93045 179 aa13□□□□□ -0.33
LIG1-219ENST00000600055 DCLRE1CQ96SD1 692 aaKnown RBP13□□□□□ -0.33
LIG1-219ENST00000600055 MS4A5Q9H3V2 200 aa13□□□□□ -0.33
LIG1-219ENST00000600055 RIBC2Q9H4K1 309 aa13□□□□□ -0.33
LIG1-219ENST00000600055 MARCH7Q9H992 704 aa13□□□□□ -0.33
LIG1-219ENST00000600055 CENPMQ9NSP4 180 aa13□□□□□ -0.33
LIG1-219ENST00000600055 SLCO1C1Q9NYB5 712 aa13□□□□□ -0.33
LIG1-219ENST00000600055 PTTG3PQ9NZH4 202 aa13□□□□□ -0.33
LIG1-219ENST00000600055 EI24O14681 340 aa12.99□□□□□ -0.33
LIG1-219ENST00000600055 NCR1O76036 304 aa12.99□□□□□ -0.33
LIG1-219ENST00000600055 HPXP02790 462 aa12.99□□□□□ -0.33
LIG1-219ENST00000600055 ERCC1P07992 297 aaPredicted RBP12.99□□□□□ -0.33
LIG1-219ENST00000600055 DAOP14920 347 aa12.99□□□□□ -0.33
LIG1-219ENST00000600055 ANOS1P23352 680 aa12.99□□□□□ -0.33
LIG1-219ENST00000600055 MAGEB1P43366 347 aa12.99□□□□□ -0.33
LIG1-219ENST00000600055 DSCR9P59020 149 aa12.99□□□□□ -0.33
LIG1-219ENST00000600055 RPS7P62081 194 aaKnown RBP12.99□□□□□ -0.33
LIG1-219ENST00000600055 ECH1Q13011 328 aa12.99□□□□□ -0.33
LIG1-219ENST00000600055 PSG7Q13046 419 aa12.99□□□□□ -0.33
LIG1-219ENST00000600055 APOFQ13790 326 aa12.99□□□□□ -0.33
LIG1-219ENST00000600055 EIF2B1Q14232 305 aaKnown RBP12.99□□□□□ -0.33
LIG1-219ENST00000600055 HLXQ14774 488 aaPredicted RBP12.99□□□□□ -0.33
LIG1-219ENST00000600055 C12orf73Q69YU5 71 aa12.99□□□□□ -0.33
LIG1-219ENST00000600055 DPY19L4Q7Z388 723 aa12.99□□□□□ -0.33
LIG1-219ENST00000600055 C1orf174Q8IYL3 243 aa12.99□□□□□ -0.33
LIG1-219ENST00000600055 TCEANCQ8N8B7 351 aa12.99□□□□□ -0.33
LIG1-219ENST00000600055 ST7LQ8TDW4 575 aa12.99□□□□□ -0.33
LIG1-219ENST00000600055 CMBLQ96DG6 245 aa12.99□□□□□ -0.33
LIG1-219ENST00000600055 SLAMF6Q96DU3 332 aa12.99□□□□□ -0.33
LIG1-219ENST00000600055 AMELYQ99218 206 aa12.99□□□□□ -0.33
LIG1-219ENST00000600055 RBM4BQ9BQ04 359 aaKnown RBP12.99□□□□□ -0.33
LIG1-219ENST00000600055 C5orf63A6NC05 138 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms