RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 FOXL2NBQ6ZUU3 175 aa15.91■□□□□ 0.14
PNKP-213ENST00000599543 AMIGO2Q86SJ2 522 aa15.91■□□□□ 0.14
PNKP-213ENST00000599543 OR8D4Q8NGM9 314 aa15.91■□□□□ 0.14
PNKP-213ENST00000599543 CCL17Q92583 94 aa15.91■□□□□ 0.14
PNKP-213ENST00000599543 FEVQ99581 238 aa15.91■□□□□ 0.14
PNKP-213ENST00000599543 IFT27Q9BW83 186 aa15.91■□□□□ 0.14
PNKP-213ENST00000599543 NDEL1Q9GZM8 345 aa15.91■□□□□ 0.14
PNKP-213ENST00000599543 EGLN1Q9GZT9 426 aa15.91■□□□□ 0.14
PNKP-213ENST00000599543 RERGLQ9H628 205 aa15.91■□□□□ 0.14
PNKP-213ENST00000599543 NTN4Q9HB63 628 aa15.91■□□□□ 0.14
PNKP-213ENST00000599543 PDP1Q9P0J1 537 aaPredicted RBP15.91■□□□□ 0.14
PNKP-213ENST00000599543 NDRG4Q9ULP0 352 aaKnown RBP15.91■□□□□ 0.14
PNKP-213ENST00000599543 A0A0G2JMP0 313 aa15.9■□□□□ 0.14
PNKP-213ENST00000599543 A0A0X1KG70 313 aa15.9■□□□□ 0.14
PNKP-213ENST00000599543 ZSCAN5BA6NJL1 495 aa15.9■□□□□ 0.14
PNKP-213ENST00000599543 XKRYO14609 159 aa15.9■□□□□ 0.14
PNKP-213ENST00000599543 ICMTO60725 284 aa15.9■□□□□ 0.14
PNKP-213ENST00000599543 SLC6A6P31641 620 aa15.9■□□□□ 0.14
PNKP-213ENST00000599543 SLC3A1Q07837 685 aa15.9■□□□□ 0.14
PNKP-213ENST00000599543 ENDOGQ14249 297 aaKnown RBP15.9■□□□□ 0.14
PNKP-213ENST00000599543 TMEM255AQ5JRV8 349 aa15.9■□□□□ 0.14
PNKP-213ENST00000599543 SLC35F1Q5T1Q4 408 aa15.9■□□□□ 0.14
PNKP-213ENST00000599543 DPY19L2P2Q6ZN68 376 aa15.9■□□□□ 0.14
PNKP-213ENST00000599543 PTCHD4Q6ZW05 846 aa15.9■□□□□ 0.14
PNKP-213ENST00000599543 SYT9Q86SS6 491 aa15.9■□□□□ 0.14
PNKP-213ENST00000599543 OR4M2Q8NGB6 313 aa15.9■□□□□ 0.14
PNKP-213ENST00000599543 PYDC1Q8WXC3 89 aa15.9■□□□□ 0.14
PNKP-213ENST00000599543 C4orf45Q96LM5 186 aa15.9■□□□□ 0.14
PNKP-213ENST00000599543 GAL3ST1Q99999 423 aa15.9■□□□□ 0.14
PNKP-213ENST00000599543 YY1AP1Q9H869 796 aa15.9■□□□□ 0.14
PNKP-213ENST00000599543 NRIP3Q9NQ35 241 aa15.9■□□□□ 0.14
PNKP-213ENST00000599543 G6PC2Q9NQR9 355 aa15.9■□□□□ 0.14
PNKP-213ENST00000599543 POLE4Q9NR33 117 aa15.9■□□□□ 0.14
PNKP-213ENST00000599543 ARMC1Q9NVT9 282 aa15.9■□□□□ 0.14
PNKP-213ENST00000599543 DNAJB9Q9UBS3 223 aa15.9■□□□□ 0.14
PNKP-213ENST00000599543 ZDHHC8Q9ULC8 765 aa15.9■□□□□ 0.14
PNKP-213ENST00000599543 TENM1Q9UKZ4 2725 aa15.89■□□□□ 0.13
PNKP-213ENST00000599543 ISPDA4D126 451 aa15.89■□□□□ 0.13
PNKP-213ENST00000599543 PLPP2O43688 288 aa15.89■□□□□ 0.13
PNKP-213ENST00000599543 TIMM8AO60220 97 aaPredicted RBP15.89■□□□□ 0.13
PNKP-213ENST00000599543 DEAF1O75398 565 aaPredicted RBP15.89■□□□□ 0.13
PNKP-213ENST00000599543 ABHD16AO95870 558 aa15.89■□□□□ 0.13
PNKP-213ENST00000599543 NGFP01138 241 aa15.89■□□□□ 0.13
PNKP-213ENST00000599543 IGHV2-5P01817 119 aa15.89■□□□□ 0.13
PNKP-213ENST00000599543 SDHAP31040 664 aa15.89■□□□□ 0.13
PNKP-213ENST00000599543 CDKN2AP42771 156 aaKnown RBP15.89■□□□□ 0.13
PNKP-213ENST00000599543 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.89■□□□□ 0.13
PNKP-213ENST00000599543 ZNF418Q8TF45 676 aaPredicted RBP15.89■□□□□ 0.13
PNKP-213ENST00000599543 LRTOMTQ8WZ04 291 aa15.89■□□□□ 0.13
PNKP-213ENST00000599543 DIRC2Q96SL1 478 aa15.89■□□□□ 0.13
PNKP-213ENST00000599543 GPX7Q96SL4 187 aaPredicted RBP15.89■□□□□ 0.13
PNKP-213ENST00000599543 WACQ9BTA9 647 aa15.89■□□□□ 0.13
PNKP-213ENST00000599543 FN3KQ9H479 309 aa15.89■□□□□ 0.13
PNKP-213ENST00000599543 EMC7Q9NPA0 242 aa15.89■□□□□ 0.13
PNKP-213ENST00000599543 TBC1D23Q9NUY8 699 aa15.89■□□□□ 0.13
PNKP-213ENST00000599543 AP4S1Q9Y587 144 aa15.89■□□□□ 0.13
PNKP-213ENST00000599543 CDH10Q9Y6N8 788 aa15.89■□□□□ 0.13
PNKP-213ENST00000599543 DYSFO75923 2080 aa15.89■□□□□ 0.13
PNKP-213ENST00000599543 ARHGAP32A7KAX9 2087 aa15.88■□□□□ 0.13
PNKP-213ENST00000599543 LOC105371242A0A075B767 164 aa15.88■□□□□ 0.13
PNKP-213ENST00000599543 ANKRD65E5RJM6 399 aa15.88■□□□□ 0.13
PNKP-213ENST00000599543 DOK2O60496 412 aa15.88■□□□□ 0.13
PNKP-213ENST00000599543 VENTXO95231 258 aa15.88■□□□□ 0.13
PNKP-213ENST00000599543 GPANK1O95872 356 aa15.88■□□□□ 0.13
PNKP-213ENST00000599543 ADH4P08319 380 aa15.88■□□□□ 0.13
PNKP-213ENST00000599543 GSTM3P21266 225 aa15.88■□□□□ 0.13
PNKP-213ENST00000599543 RPS6KA3P51812 740 aa15.88■□□□□ 0.13
PNKP-213ENST00000599543 SCRN3Q0VDG4 424 aa15.88■□□□□ 0.13
PNKP-213ENST00000599543 PEG10Q86TG7 708 aaKnown RBP15.88■□□□□ 0.13
PNKP-213ENST00000599543 LINC00471Q8N535 108 aa15.88■□□□□ 0.13
PNKP-213ENST00000599543 IQCF1Q8N6M8 205 aa15.88■□□□□ 0.13
PNKP-213ENST00000599543 NPEPL1Q8NDH3 523 aa15.88■□□□□ 0.13
PNKP-213ENST00000599543 SEMA6DQ8NFY4 1073 aa15.88■□□□□ 0.13
PNKP-213ENST00000599543 OR4K13Q8NH42 304 aa15.88■□□□□ 0.13
PNKP-213ENST00000599543 ZFAND2BQ8WV99 257 aa15.88■□□□□ 0.13
PNKP-213ENST00000599543 TSSK2Q96PF2 358 aa15.88■□□□□ 0.13
PNKP-213ENST00000599543 DGCR6LQ9BY27 220 aa15.88■□□□□ 0.13
PNKP-213ENST00000599543 SYT4Q9H2B2 425 aa15.88■□□□□ 0.13
PNKP-213ENST00000599543 MSL2Q9HCI7 577 aa15.88■□□□□ 0.13
PNKP-213ENST00000599543 PRSS37A4D1T9 235 aa15.87■□□□□ 0.13
PNKP-213ENST00000599543 AHCYL1O43865 530 aa15.87■□□□□ 0.13
PNKP-213ENST00000599543 RGS9O75916 674 aaPredicted RBP15.87■□□□□ 0.13
PNKP-213ENST00000599543 SCG5P05408 212 aa15.87■□□□□ 0.13
PNKP-213ENST00000599543 COX5BP10606 129 aa15.87■□□□□ 0.13
PNKP-213ENST00000599543 HIST1H1CP16403 213 aaKnown RBP15.87■□□□□ 0.13
PNKP-213ENST00000599543 CTLA4P16410 223 aa15.87■□□□□ 0.13
PNKP-213ENST00000599543 EPHA1P21709 976 aa15.87■□□□□ 0.13
PNKP-213ENST00000599543 HTR5AP47898 357 aa15.87■□□□□ 0.13
PNKP-213ENST00000599543 DCAF12L2Q5VW00 463 aa15.87■□□□□ 0.13
PNKP-213ENST00000599543 GPR139Q6DWJ6 353 aa15.87■□□□□ 0.13
PNKP-213ENST00000599543 LEG1Q6P5S2 330 aa15.87■□□□□ 0.13
PNKP-213ENST00000599543 RASSF6Q6ZTQ3 369 aa15.87■□□□□ 0.13
PNKP-213ENST00000599543 ZNF771Q7L3S4 317 aaPredicted RBP15.87■□□□□ 0.13
PNKP-213ENST00000599543 SDR9C7Q8NEX9 313 aa15.87■□□□□ 0.13
PNKP-213ENST00000599543 OR4Q3Q8NH05 313 aa15.87■□□□□ 0.13
PNKP-213ENST00000599543 NMNAT3Q96T66 252 aa15.87■□□□□ 0.13
PNKP-213ENST00000599543 TSSK6Q9BXA6 273 aa15.87■□□□□ 0.13
PNKP-213ENST00000599543 SEMA6AQ9H2E6 1030 aa15.87■□□□□ 0.13
PNKP-213ENST00000599543 UBAP1Q9NZ09 502 aa15.87■□□□□ 0.13
PNKP-213ENST00000599543 J3QLI3 93 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms