RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 AUP1Q9Y679 476 aa10.16□□□□□ -0.78
SOX2-OT-228ENST00000597828 MGAM2Q2M2H8 2515 aa10.15□□□□□ -0.78
SOX2-OT-228ENST00000597828 MDFIC2A0A1B0GVS7 189 aa10.15□□□□□ -0.78
SOX2-OT-228ENST00000597828 OR6C6A6NF89 314 aa10.15□□□□□ -0.78
SOX2-OT-228ENST00000597828 TMEM178BH3BS89 294 aa10.15□□□□□ -0.78
SOX2-OT-228ENST00000597828 SOCS2O14508 198 aa10.15□□□□□ -0.78
SOX2-OT-228ENST00000597828 XKRYO14609 159 aa10.15□□□□□ -0.78
SOX2-OT-228ENST00000597828 RER1O15258 196 aa10.15□□□□□ -0.78
SOX2-OT-228ENST00000597828 MLNRO43193 412 aa10.15□□□□□ -0.78
SOX2-OT-228ENST00000597828 SLC16A7O60669 478 aa10.15□□□□□ -0.78
SOX2-OT-228ENST00000597828 SERPINA1P01009 418 aa10.15□□□□□ -0.78
SOX2-OT-228ENST00000597828 TNFRSF1AP19438 455 aa10.15□□□□□ -0.78
SOX2-OT-228ENST00000597828 TNFSF4P23510 183 aa10.15□□□□□ -0.78
SOX2-OT-228ENST00000597828 IFNA8P32881 189 aa10.15□□□□□ -0.78
SOX2-OT-228ENST00000597828 SLC7A2P52569 658 aa10.15□□□□□ -0.78
SOX2-OT-228ENST00000597828 FXYD6P3P58550 94 aa10.15□□□□□ -0.78
SOX2-OT-228ENST00000597828 HOXA4Q00056 320 aaPredicted RBP10.15□□□□□ -0.78
SOX2-OT-228ENST00000597828 FAM201AQ5SY85 155 aa10.15□□□□□ -0.78
SOX2-OT-228ENST00000597828 OR2T2Q6IF00 324 aa10.15□□□□□ -0.78
SOX2-OT-228ENST00000597828 ARL9Q6T311 187 aa10.15□□□□□ -0.78
SOX2-OT-228ENST00000597828 HACD2Q6Y1H2 254 aa10.15□□□□□ -0.78
SOX2-OT-228ENST00000597828 TMPRSS11FQ6ZWK6 438 aa10.15□□□□□ -0.78
SOX2-OT-228ENST00000597828 CBLL1Q75N03 491 aa10.15□□□□□ -0.78
SOX2-OT-228ENST00000597828 ZER1Q7Z7L7 766 aa10.15□□□□□ -0.78
SOX2-OT-228ENST00000597828 BHLHE23Q8NDY6 225 aa10.15□□□□□ -0.78
SOX2-OT-228ENST00000597828 SLC7A13Q8TCU3 470 aa10.15□□□□□ -0.78
SOX2-OT-228ENST00000597828 HAVCR1Q96D42 359 aa10.15□□□□□ -0.78
SOX2-OT-228ENST00000597828 TSSK2Q96PF2 358 aa10.15□□□□□ -0.78
SOX2-OT-228ENST00000597828 HOPXQ9BPY8 73 aaPredicted RBP10.15□□□□□ -0.78
SOX2-OT-228ENST00000597828 WDR76Q9H967 626 aa10.15□□□□□ -0.78
SOX2-OT-228ENST00000597828 NTN4Q9HB63 628 aa10.15□□□□□ -0.78
SOX2-OT-228ENST00000597828 GCM1Q9NP62 436 aa10.15□□□□□ -0.78
SOX2-OT-228ENST00000597828 NDE1Q9NXR1 346 aa10.15□□□□□ -0.78
SOX2-OT-228ENST00000597828 IL19Q9UHD0 177 aa10.15□□□□□ -0.78
SOX2-OT-228ENST00000597828 SIGLEC7Q9Y286 467 aa10.15□□□□□ -0.78
SOX2-OT-228ENST00000597828 POLR3KQ9Y2Y1 108 aaPredicted RBP10.15□□□□□ -0.78
SOX2-OT-228ENST00000597828 TRAV40A0A0B4J280 105 aa10.14□□□□□ -0.79
SOX2-OT-228ENST00000597828 HTR3EA5X5Y0 456 aa10.14□□□□□ -0.79
SOX2-OT-228ENST00000597828 DCTN6O00399 190 aa10.14□□□□□ -0.79
SOX2-OT-228ENST00000597828 PRTN3P24158 256 aa10.14□□□□□ -0.79
SOX2-OT-228ENST00000597828 SDHAP31040 664 aa10.14□□□□□ -0.79
SOX2-OT-228ENST00000597828 CD80P33681 288 aa10.14□□□□□ -0.79
SOX2-OT-228ENST00000597828 MDH2P40926 338 aaKnown RBP10.14□□□□□ -0.79
SOX2-OT-228ENST00000597828 GSK3BP49841 420 aa10.14□□□□□ -0.79
SOX2-OT-228ENST00000597828 BAMBIQ13145 260 aa10.14□□□□□ -0.79
SOX2-OT-228ENST00000597828 KRT72Q14CN4 511 aa10.14□□□□□ -0.79
SOX2-OT-228ENST00000597828 ANKDD1AQ495B1 522 aa10.14□□□□□ -0.79
SOX2-OT-228ENST00000597828 ESCO2Q56NI9 601 aa10.14□□□□□ -0.79
SOX2-OT-228ENST00000597828 C8orf82Q6P1X6 216 aaPredicted RBP10.14□□□□□ -0.79
SOX2-OT-228ENST00000597828 CORO6Q6QEF8 472 aa10.14□□□□□ -0.79
SOX2-OT-228ENST00000597828 RBMS3Q6XE24 437 aaKnown RBP10.14□□□□□ -0.79
SOX2-OT-228ENST00000597828 FKBP9P1Q75LS8 142 aa10.14□□□□□ -0.79
SOX2-OT-228ENST00000597828 TRPM8Q7Z2W7 1104 aa10.14□□□□□ -0.79
SOX2-OT-228ENST00000597828 ARPINQ7Z6K5 226 aa10.14□□□□□ -0.79
SOX2-OT-228ENST00000597828 RNF113BQ8IZP6 322 aaKnown RBP10.14□□□□□ -0.79
SOX2-OT-228ENST00000597828 PARP8Q8N3A8 854 aa10.14□□□□□ -0.79
SOX2-OT-228ENST00000597828 ATG16L2Q8NAA4 619 aa10.14□□□□□ -0.79
SOX2-OT-228ENST00000597828 FAM156AQ8NDB6 213 aa10.14□□□□□ -0.79
SOX2-OT-228ENST00000597828 OR1F12Q8NHA8 337 aa10.14□□□□□ -0.79
SOX2-OT-228ENST00000597828 RSRC1Q96IZ7 334 aaKnown RBP10.14□□□□□ -0.79
SOX2-OT-228ENST00000597828 MEGF10Q96KG7 1140 aa10.14□□□□□ -0.79
SOX2-OT-228ENST00000597828 MRI1Q9BV20 369 aa10.14□□□□□ -0.79
SOX2-OT-228ENST00000597828 ZNF747Q9BV97 191 aa10.14□□□□□ -0.79
SOX2-OT-228ENST00000597828 NUAK2Q9H093 628 aa10.14□□□□□ -0.79
SOX2-OT-228ENST00000597828 NMNAT1Q9HAN9 279 aaPredicted RBP10.14□□□□□ -0.79
SOX2-OT-228ENST00000597828 OR5V1Q9UGF6 321 aa10.14□□□□□ -0.79
SOX2-OT-228ENST00000597828 LHFPL6Q9Y693 200 aa10.14□□□□□ -0.79
SOX2-OT-228ENST00000597828 TRBV4-1A0A0J9YWV2 114 aa10.13□□□□□ -0.79
SOX2-OT-228ENST00000597828 F5H5P2 479 aa10.13□□□□□ -0.79
SOX2-OT-228ENST00000597828 GSTA4O15217 222 aa10.13□□□□□ -0.79
SOX2-OT-228ENST00000597828 GMNNO75496 209 aa10.13□□□□□ -0.79
SOX2-OT-228ENST00000597828 KHDRBS3O75525 346 aaKnown RBP10.13□□□□□ -0.79
SOX2-OT-228ENST00000597828 DIRAS1O95057 198 aa10.13□□□□□ -0.79
SOX2-OT-228ENST00000597828 NDUFB2O95178 105 aa10.13□□□□□ -0.79
SOX2-OT-228ENST00000597828 RPS2P15880 293 aaKnown RBP10.13□□□□□ -0.79
SOX2-OT-228ENST00000597828 CALB2P22676 271 aa10.13□□□□□ -0.79
SOX2-OT-228ENST00000597828 CDKN2AP42771 156 aaKnown RBP10.13□□□□□ -0.79
SOX2-OT-228ENST00000597828 NUDT2P50583 147 aa10.13□□□□□ -0.79
SOX2-OT-228ENST00000597828 PAX2Q02962 417 aa10.13□□□□□ -0.79
SOX2-OT-228ENST00000597828 FOXL1Q12952 345 aa10.13□□□□□ -0.79
SOX2-OT-228ENST00000597828 SEC23BQ15437 767 aa10.13□□□□□ -0.79
SOX2-OT-228ENST00000597828 FGD3Q5JSP0 725 aa10.13□□□□□ -0.79
SOX2-OT-228ENST00000597828 C16orf89Q6UX73 402 aa10.13□□□□□ -0.79
SOX2-OT-228ENST00000597828 MOGAT3Q86VF5 341 aa10.13□□□□□ -0.79
SOX2-OT-228ENST00000597828 FITM2Q8N6M3 262 aa10.13□□□□□ -0.79
SOX2-OT-228ENST00000597828 FAM86B1Q8N7N1 296 aa10.13□□□□□ -0.79
SOX2-OT-228ENST00000597828 C19orf18Q8NEA5 215 aa10.13□□□□□ -0.79
SOX2-OT-228ENST00000597828 PTP4A1Q93096 173 aa10.13□□□□□ -0.79
SOX2-OT-228ENST00000597828 FAM162AQ96A26 154 aa10.13□□□□□ -0.79
SOX2-OT-228ENST00000597828 GPA33Q99795 319 aa10.13□□□□□ -0.79
SOX2-OT-228ENST00000597828 WACQ9BTA9 647 aa10.13□□□□□ -0.79
SOX2-OT-228ENST00000597828 SSBP3Q9BWW4 388 aaPredicted RBP10.13□□□□□ -0.79
SOX2-OT-228ENST00000597828 UNKLQ9H9P5 680 aaKnown RBP10.13□□□□□ -0.79
SOX2-OT-228ENST00000597828 NRIP3Q9NQ35 241 aa10.13□□□□□ -0.79
SOX2-OT-228ENST00000597828 VSX1Q9NZR4 365 aaPredicted RBP10.13□□□□□ -0.79
SOX2-OT-228ENST00000597828 POLR1DQ9Y2S0 133 aa10.13□□□□□ -0.79
SOX2-OT-228ENST00000597828 IER3IP1Q9Y5U9 82 aa10.13□□□□□ -0.79
SOX2-OT-228ENST00000597828 ENPP4Q9Y6X5 453 aa10.13□□□□□ -0.79
SOX2-OT-228ENST00000597828 MEGF8Q7Z7M0 2845 aa10.13□□□□□ -0.79
SOX2-OT-228ENST00000597828 PTP4A3O75365 173 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms