RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 PLXNB1O43157 2135 aa8.37□□□□□ -1.07
TRIM28-210ENST00000597618 SGCEO43556 437 aa8.37□□□□□ -1.07
TRIM28-210ENST00000597618 OPN1SWP03999 348 aa8.37□□□□□ -1.07
TRIM28-210ENST00000597618 FBP1P09467 338 aa8.37□□□□□ -1.07
TRIM28-210ENST00000597618 TSPAN19P0C672 248 aa8.37□□□□□ -1.07
TRIM28-210ENST00000597618 VSIG8P0DPA2 414 aa8.37□□□□□ -1.07
TRIM28-210ENST00000597618 GPX2P18283 190 aa8.37□□□□□ -1.07
TRIM28-210ENST00000597618 GABRA5P31644 462 aa8.37□□□□□ -1.07
TRIM28-210ENST00000597618 RBM34P42696 430 aaKnown RBP8.37□□□□□ -1.07
TRIM28-210ENST00000597618 GATA4P43694 442 aa8.37□□□□□ -1.07
TRIM28-210ENST00000597618 RGS6P49758 472 aa8.37□□□□□ -1.07
TRIM28-210ENST00000597618 STX1BP61266 288 aa8.37□□□□□ -1.07
TRIM28-210ENST00000597618 TOP3AQ13472 1001 aaPredicted RBP8.37□□□□□ -1.07
TRIM28-210ENST00000597618 ALG10Q5BKT4 473 aa8.37□□□□□ -1.07
TRIM28-210ENST00000597618 OR2T2Q6IF00 324 aa8.37□□□□□ -1.07
TRIM28-210ENST00000597618 C1orf94Q6P1W5 598 aa8.37□□□□□ -1.07
TRIM28-210ENST00000597618 C11orf88Q6PI97 169 aa8.37□□□□□ -1.07
TRIM28-210ENST00000597618 FBXW12Q6X9E4 464 aa8.37□□□□□ -1.07
TRIM28-210ENST00000597618 TSPYL5Q86VY4 417 aaPredicted RBP8.37□□□□□ -1.07
TRIM28-210ENST00000597618 PCYOX1LQ8NBM8 494 aa8.37□□□□□ -1.07
TRIM28-210ENST00000597618 C11orf65Q8NCR3 313 aa8.37□□□□□ -1.07
TRIM28-210ENST00000597618 OR5L1Q8NGL2 311 aa8.37□□□□□ -1.07
TRIM28-210ENST00000597618 PFN4Q8NHR9 129 aa8.37□□□□□ -1.07
TRIM28-210ENST00000597618 Q8TCH9 128 aa8.37□□□□□ -1.07
TRIM28-210ENST00000597618 LIPHQ8WWY8 451 aa8.37□□□□□ -1.07
TRIM28-210ENST00000597618 SGCDQ92629 289 aa8.37□□□□□ -1.07
TRIM28-210ENST00000597618 ERGIC1Q969X5 290 aa8.37□□□□□ -1.07
TRIM28-210ENST00000597618 RASD2Q96D21 266 aa8.37□□□□□ -1.07
TRIM28-210ENST00000597618 PRSS27Q9BQR3 290 aa8.37□□□□□ -1.07
TRIM28-210ENST00000597618 TMEM109Q9BVC6 243 aa8.37□□□□□ -1.07
TRIM28-210ENST00000597618 IKZF5Q9H5V7 419 aa8.37□□□□□ -1.07
TRIM28-210ENST00000597618 THAP1Q9NVV9 213 aa8.37□□□□□ -1.07
TRIM28-210ENST00000597618 AURKAIP1Q9NWT8 199 aaPredicted RBP8.37□□□□□ -1.07
TRIM28-210ENST00000597618 VAPAQ9P0L0 249 aa8.37□□□□□ -1.07
TRIM28-210ENST00000597618 SLAMF8Q9P0V8 285 aa8.37□□□□□ -1.07
TRIM28-210ENST00000597618 FBLN5Q9UBX5 448 aa8.37□□□□□ -1.07
TRIM28-210ENST00000597618 TMCC3Q9ULS5 477 aa8.37□□□□□ -1.07
TRIM28-210ENST00000597618 USH1CQ9Y6N9 552 aa8.37□□□□□ -1.07
TRIM28-210ENST00000597618 TRBV5-3A0A0A0MS03 114 aa8.36□□□□□ -1.07
TRIM28-210ENST00000597618 ANKRD61A6NGH8 418 aa8.36□□□□□ -1.07
TRIM28-210ENST00000597618 A6NIZ1 184 aa8.36□□□□□ -1.07
TRIM28-210ENST00000597618 RGS16O15492 202 aaPredicted RBP8.36□□□□□ -1.07
TRIM28-210ENST00000597618 MLNRO43193 412 aa8.36□□□□□ -1.07
TRIM28-210ENST00000597618 SNNO75324 88 aaPredicted RBP8.36□□□□□ -1.07
TRIM28-210ENST00000597618 PMELP40967 661 aa8.36□□□□□ -1.07
TRIM28-210ENST00000597618 RAP1BP61224 184 aa8.36□□□□□ -1.07
TRIM28-210ENST00000597618 RPL27P61353 136 aaKnown RBP8.36□□□□□ -1.07
TRIM28-210ENST00000597618 RAP1AP62834 184 aa8.36□□□□□ -1.07
TRIM28-210ENST00000597618 DBPQ10586 325 aaPredicted RBP8.36□□□□□ -1.07
TRIM28-210ENST00000597618 COX10Q12887 443 aa8.36□□□□□ -1.07
TRIM28-210ENST00000597618 KRT71Q3SY84 523 aa8.36□□□□□ -1.07
TRIM28-210ENST00000597618 OXLD1Q5BKU9 147 aa8.36□□□□□ -1.07
TRIM28-210ENST00000597618 IGFN1Q86VF2 1251 aa8.36□□□□□ -1.07
TRIM28-210ENST00000597618 PIP4P2Q8N4L2 257 aa8.36□□□□□ -1.07
TRIM28-210ENST00000597618 CELF2-AS1Q8N7Q2 184 aa8.36□□□□□ -1.07
TRIM28-210ENST00000597618 SPERTQ8NA61 448 aa8.36□□□□□ -1.07
TRIM28-210ENST00000597618 BHLHE23Q8NDY6 225 aa8.36□□□□□ -1.07
TRIM28-210ENST00000597618 OR4D11Q8NGI4 311 aa8.36□□□□□ -1.07
TRIM28-210ENST00000597618 OR5R1Q8NH85 324 aa8.36□□□□□ -1.07
TRIM28-210ENST00000597618 TMEM255BQ8WV15 326 aa8.36□□□□□ -1.07
TRIM28-210ENST00000597618 OR52B2Q96RD2 323 aa8.36□□□□□ -1.07
TRIM28-210ENST00000597618 PAIP2Q9BPZ3 127 aaKnown RBP8.36□□□□□ -1.07
TRIM28-210ENST00000597618 EMC7Q9NPA0 242 aa8.36□□□□□ -1.07
TRIM28-210ENST00000597618 C20orf141Q9NUB4 165 aa8.36□□□□□ -1.07
TRIM28-210ENST00000597618 PTTG3PQ9NZH4 202 aa8.36□□□□□ -1.07
TRIM28-210ENST00000597618 ZNRD1Q9P1U0 126 aa8.36□□□□□ -1.07
TRIM28-210ENST00000597618 CTSZQ9UBR2 303 aa8.36□□□□□ -1.07
TRIM28-210ENST00000597618 ATPIF1Q9UII2 106 aa8.36□□□□□ -1.07
TRIM28-210ENST00000597618 A0A1B0GVI7 797 aa8.35□□□□□ -1.07
TRIM28-210ENST00000597618 A0A1B0GWJ7 208 aa8.35□□□□□ -1.07
TRIM28-210ENST00000597618 ELOVL7A1L3X0 281 aa8.35□□□□□ -1.07
TRIM28-210ENST00000597618 OR6C6A6NF89 314 aa8.35□□□□□ -1.07
TRIM28-210ENST00000597618 IQCF6A8MYZ5 107 aa8.35□□□□□ -1.07
TRIM28-210ENST00000597618 RNASEK-C17orf49H0YIS7 233 aa8.35□□□□□ -1.07
TRIM28-210ENST00000597618 M0QX08 132 aa8.35□□□□□ -1.07
TRIM28-210ENST00000597618 ECDO95905 644 aaPredicted RBP8.35□□□□□ -1.07
TRIM28-210ENST00000597618 MRPL19P49406 292 aaKnown RBP8.35□□□□□ -1.07
TRIM28-210ENST00000597618 ARF6P62330 175 aa8.35□□□□□ -1.07
TRIM28-210ENST00000597618 AQP6Q13520 282 aa8.35□□□□□ -1.07
TRIM28-210ENST00000597618 MPP2Q14168 576 aa8.35□□□□□ -1.07
TRIM28-210ENST00000597618 LAPTM4AQ15012 233 aa8.35□□□□□ -1.07
TRIM28-210ENST00000597618 CYP51A1Q16850 503 aa8.35□□□□□ -1.07
TRIM28-210ENST00000597618 C11orf91Q3C1V1 193 aa8.35□□□□□ -1.07
TRIM28-210ENST00000597618 INTS11Q5TA45 600 aaKnown RBP8.35□□□□□ -1.07
TRIM28-210ENST00000597618 SLC35E4Q6ICL7 350 aa8.35□□□□□ -1.07
TRIM28-210ENST00000597618 PATL1Q86TB9 770 aaKnown RBP8.35□□□□□ -1.07
TRIM28-210ENST00000597618 PDZD9Q8IXQ8 264 aa8.35□□□□□ -1.07
TRIM28-210ENST00000597618 C19orf18Q8NEA5 215 aa8.35□□□□□ -1.07
TRIM28-210ENST00000597618 OR4S1Q8NGB4 309 aa8.35□□□□□ -1.07
TRIM28-210ENST00000597618 NPRL2Q8WTW4 380 aa8.35□□□□□ -1.07
TRIM28-210ENST00000597618 TMEM239Q8WW34 195 aa8.35□□□□□ -1.07
TRIM28-210ENST00000597618 CFHR4Q92496 578 aa8.35□□□□□ -1.07
TRIM28-210ENST00000597618 SPDL1Q96EA4 605 aa8.35□□□□□ -1.07
TRIM28-210ENST00000597618 KCNK9Q9NPC2 374 aa8.35□□□□□ -1.07
TRIM28-210ENST00000597618 TRIM36Q9NQ86 728 aa8.35□□□□□ -1.07
TRIM28-210ENST00000597618 TMEM100Q9NV29 134 aa8.35□□□□□ -1.07
TRIM28-210ENST00000597618 HIF3AQ9Y2N7 669 aa8.35□□□□□ -1.07
TRIM28-210ENST00000597618 LGALS8O00214 317 aa8.34□□□□□ -1.07
TRIM28-210ENST00000597618 FBP2O00757 339 aa8.34□□□□□ -1.07
TRIM28-210ENST00000597618 ADAM20O43506 726 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms