RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 BPIFB6Q8NFQ5 453 aa13.39□□□□□ -0.27
SMCO4-206ENST00000596676 OR10H4Q8NGA5 316 aa13.39□□□□□ -0.27
SMCO4-206ENST00000596676 OR52I1Q8NGK6 324 aa13.39□□□□□ -0.27
SMCO4-206ENST00000596676 SGCDQ92629 289 aa13.39□□□□□ -0.27
SMCO4-206ENST00000596676 AKAP1Q92667 903 aaKnown RBP eCLIP13.39□□□□□ -0.27
SMCO4-206ENST00000596676 Q96MT0 163 aa13.39□□□□□ -0.27
SMCO4-206ENST00000596676 COQ7Q99807 217 aa13.39□□□□□ -0.27
SMCO4-206ENST00000596676 ATF6BQ99941 703 aa13.39□□□□□ -0.27
SMCO4-206ENST00000596676 ANKRD60Q9BZ19 345 aa13.39□□□□□ -0.27
SMCO4-206ENST00000596676 CLEC4MQ9H2X3 399 aaPredicted RBP13.39□□□□□ -0.27
SMCO4-206ENST00000596676 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.39□□□□□ -0.27
SMCO4-206ENST00000596676 FZR1Q9UM11 496 aa13.39□□□□□ -0.27
SMCO4-206ENST00000596676 EXOGQ9Y2C4 368 aaKnown RBP13.39□□□□□ -0.27
SMCO4-206ENST00000596676 F5H5K5 113 aa13.38□□□□□ -0.27
SMCO4-206ENST00000596676 PTHP01270 115 aa13.38□□□□□ -0.27
SMCO4-206ENST00000596676 ACSM4P0C7M7 580 aa13.38□□□□□ -0.27
SMCO4-206ENST00000596676 COX5BP10606 129 aa13.38□□□□□ -0.27
SMCO4-206ENST00000596676 SLC2A1P11166 492 aa13.38□□□□□ -0.27
SMCO4-206ENST00000596676 THBS4P35443 961 aa13.38□□□□□ -0.27
SMCO4-206ENST00000596676 SLC15A1P46059 708 aa13.38□□□□□ -0.27
SMCO4-206ENST00000596676 HSPA13P48723 471 aa13.38□□□□□ -0.27
SMCO4-206ENST00000596676 CXCR4P61073 352 aa13.38□□□□□ -0.27
SMCO4-206ENST00000596676 KRTAP27-1Q3LI81 207 aa13.38□□□□□ -0.27
SMCO4-206ENST00000596676 ZNF672Q499Z4 452 aaPredicted RBP13.38□□□□□ -0.27
SMCO4-206ENST00000596676 C6orf141Q5SZD1 244 aa13.38□□□□□ -0.27
SMCO4-206ENST00000596676 SPATA46Q5T0L3 261 aa13.38□□□□□ -0.27
SMCO4-206ENST00000596676 PLEKHG7Q6ZR37 379 aa13.38□□□□□ -0.27
SMCO4-206ENST00000596676 RFPL4BQ6ZWI9 263 aa13.38□□□□□ -0.27
SMCO4-206ENST00000596676 RNF133Q8WVZ7 376 aa13.38□□□□□ -0.27
SMCO4-206ENST00000596676 GGHQ92820 318 aa13.38□□□□□ -0.27
SMCO4-206ENST00000596676 C14orf79Q96F83 325 aa13.38□□□□□ -0.27
SMCO4-206ENST00000596676 KCNS3Q9BQ31 491 aa13.38□□□□□ -0.27
SMCO4-206ENST00000596676 COPS4Q9BT78 406 aa13.38□□□□□ -0.27
SMCO4-206ENST00000596676 HDHD2Q9H0R4 259 aa13.38□□□□□ -0.27
SMCO4-206ENST00000596676 PLEKHF2Q9H8W4 249 aa13.38□□□□□ -0.27
SMCO4-206ENST00000596676 UBTD1Q9HAC8 227 aa13.38□□□□□ -0.27
SMCO4-206ENST00000596676 UBAP1Q9NZ09 502 aa13.38□□□□□ -0.27
SMCO4-206ENST00000596676 POU2F3Q9UKI9 436 aa13.38□□□□□ -0.27
SMCO4-206ENST00000596676 RAB26Q9ULW5 256 aa13.38□□□□□ -0.27
SMCO4-206ENST00000596676 STARD10Q9Y365 291 aa13.38□□□□□ -0.27
SMCO4-206ENST00000596676 N6AMT1Q9Y5N5 214 aa13.38□□□□□ -0.27
SMCO4-206ENST00000596676 HSPE1-MOB4S4R3N1 261 aa13.38□□□□□ -0.27
SMCO4-206ENST00000596676 AKAP6Q13023 2319 aa13.38□□□□□ -0.27
SMCO4-206ENST00000596676 PLCE1Q9P212 2302 aa13.38□□□□□ -0.27
SMCO4-206ENST00000596676 CACNA1DQ01668 2161 aa13.37□□□□□ -0.27
SMCO4-206ENST00000596676 ZNF670-ZNF695F2Z2N8 137 aa13.37□□□□□ -0.27
SMCO4-206ENST00000596676 H2BFMP0C1H6 154 aa13.37□□□□□ -0.27
SMCO4-206ENST00000596676 NR4A1P22736 598 aa13.37□□□□□ -0.27
SMCO4-206ENST00000596676 PAX7P23759 505 aa13.37□□□□□ -0.27
SMCO4-206ENST00000596676 OPRL1P41146 370 aa13.37□□□□□ -0.27
SMCO4-206ENST00000596676 NKX6-1P78426 367 aaPredicted RBP13.37□□□□□ -0.27
SMCO4-206ENST00000596676 SNTB2Q13425 540 aaKnown RBP13.37□□□□□ -0.27
SMCO4-206ENST00000596676 TMED1Q13445 227 aa13.37□□□□□ -0.27
SMCO4-206ENST00000596676 TAF13Q15543 124 aa13.37□□□□□ -0.27
SMCO4-206ENST00000596676 ZNF322Q6U7Q0 402 aaPredicted RBP13.37□□□□□ -0.27
SMCO4-206ENST00000596676 LHFPL3Q86UP9 236 aa13.37□□□□□ -0.27
SMCO4-206ENST00000596676 ZNF454Q8N9F8 522 aa13.37□□□□□ -0.27
SMCO4-206ENST00000596676 OR1J2Q8NGS2 313 aa13.37□□□□□ -0.27
SMCO4-206ENST00000596676 C4orf45Q96LM5 186 aa13.37□□□□□ -0.27
SMCO4-206ENST00000596676 ELOVL3Q9HB03 270 aa13.37□□□□□ -0.27
SMCO4-206ENST00000596676 MOV10Q9HCE1 1003 aaKnown RBP13.37□□□□□ -0.27
SMCO4-206ENST00000596676 BRD7Q9NPI1 651 aa13.37□□□□□ -0.27
SMCO4-206ENST00000596676 DDX28Q9NUL7 540 aaKnown RBP13.37□□□□□ -0.27
SMCO4-206ENST00000596676 RPL36Q9Y3U8 105 aaKnown RBP13.37□□□□□ -0.27
SMCO4-206ENST00000596676 LRP12Q9Y561 859 aa13.37□□□□□ -0.27
SMCO4-206ENST00000596676 TACC2O95359 2948 aa13.36□□□□□ -0.27
SMCO4-206ENST00000596676 ZNF878C9JN71 531 aa13.36□□□□□ -0.27
SMCO4-206ENST00000596676 SMPD2O60906 423 aa13.36□□□□□ -0.27
SMCO4-206ENST00000596676 FAM20BO75063 409 aa13.36□□□□□ -0.27
SMCO4-206ENST00000596676 OR2T7P0C7T2 308 aa13.36□□□□□ -0.27
SMCO4-206ENST00000596676 UCP2P55851 309 aa13.36□□□□□ -0.27
SMCO4-206ENST00000596676 PRSS12P56730 875 aa13.36□□□□□ -0.27
SMCO4-206ENST00000596676 POU4F2Q12837 409 aa13.36□□□□□ -0.27
SMCO4-206ENST00000596676 TMEM255AQ5JRV8 349 aa13.36□□□□□ -0.27
SMCO4-206ENST00000596676 KRT77Q7Z794 578 aa13.36□□□□□ -0.27
SMCO4-206ENST00000596676 LRP11Q86VZ4 500 aa13.36□□□□□ -0.27
SMCO4-206ENST00000596676 IL17RDQ8NFM7 739 aa13.36□□□□□ -0.27
SMCO4-206ENST00000596676 OR2T27Q8NH04 317 aa13.36□□□□□ -0.27
SMCO4-206ENST00000596676 ABHD4Q8TB40 342 aa13.36□□□□□ -0.27
SMCO4-206ENST00000596676 PPP1R14AQ96A00 147 aa13.36□□□□□ -0.27
SMCO4-206ENST00000596676 OR8B4Q96RC9 309 aa13.36□□□□□ -0.27
SMCO4-206ENST00000596676 ZNF649Q9BS31 505 aa13.36□□□□□ -0.27
SMCO4-206ENST00000596676 RASSF4Q9H2L5 321 aa13.36□□□□□ -0.27
SMCO4-206ENST00000596676 MRPS18AQ9NVS2 196 aaKnown RBP13.36□□□□□ -0.27
SMCO4-206ENST00000596676 PAK1IP1Q9NWT1 392 aaPredicted RBP13.36□□□□□ -0.27
SMCO4-206ENST00000596676 CISD1Q9NZ45 108 aaKnown RBP13.36□□□□□ -0.27
SMCO4-206ENST00000596676 MRM2Q9UI43 246 aaKnown RBP13.36□□□□□ -0.27
SMCO4-206ENST00000596676 IKZF2Q9UKS7 526 aa13.36□□□□□ -0.27
SMCO4-206ENST00000596676 ABCA12Q86UK0 2595 aa13.35□□□□□ -0.27
SMCO4-206ENST00000596676 RAI1Q7Z5J4 1906 aaPredicted RBP13.35□□□□□ -0.27
SMCO4-206ENST00000596676 SNTNA6NMZ2 147 aa13.35□□□□□ -0.27
SMCO4-206ENST00000596676 M0R135 149 aa13.35□□□□□ -0.27
SMCO4-206ENST00000596676 SLC1A7O00341 560 aa13.35□□□□□ -0.27
SMCO4-206ENST00000596676 HS3ST1O14792 307 aa13.35□□□□□ -0.27
SMCO4-206ENST00000596676 ABHD16AO95870 558 aa13.35□□□□□ -0.27
SMCO4-206ENST00000596676 SSTR2P30874 369 aa13.35□□□□□ -0.27
SMCO4-206ENST00000596676 OTX1P32242 354 aaPredicted RBP13.35□□□□□ -0.27
SMCO4-206ENST00000596676 SNAI3Q3KNW1 292 aa13.35□□□□□ -0.27
SMCO4-206ENST00000596676 TP53I3Q53FA7 332 aa13.35□□□□□ -0.27
SMCO4-206ENST00000596676 ZNF684Q5T5D7 378 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms