RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 CLPTM1O96005 669 aa14.81□□□□□ -0.04
SHKBP1-212ENST00000596163 NGFP01138 241 aa14.81□□□□□ -0.04
SHKBP1-212ENST00000596163 SPARCP09486 303 aa14.81□□□□□ -0.04
SHKBP1-212ENST00000596163 GSTT1P30711 240 aa14.81□□□□□ -0.04
SHKBP1-212ENST00000596163 DBPQ10586 325 aaPredicted RBP14.81□□□□□ -0.04
SHKBP1-212ENST00000596163 PTGES3Q15185 160 aaKnown RBP14.81□□□□□ -0.04
SHKBP1-212ENST00000596163 PCGF3Q3KNV8 242 aa14.81□□□□□ -0.04
SHKBP1-212ENST00000596163 SPATA46Q5T0L3 261 aa14.81□□□□□ -0.04
SHKBP1-212ENST00000596163 TMEM236Q5W0B7 351 aa14.81□□□□□ -0.04
SHKBP1-212ENST00000596163 PLBD1Q6P4A8 553 aa14.81□□□□□ -0.04
SHKBP1-212ENST00000596163 RFPL4BQ6ZWI9 263 aa14.81□□□□□ -0.04
SHKBP1-212ENST00000596163 SHFQ7M4L6 423 aa14.81□□□□□ -0.04
SHKBP1-212ENST00000596163 ZNF525Q8N782 197 aa14.81□□□□□ -0.04
SHKBP1-212ENST00000596163 ZNF511Q8NB15 262 aa14.81□□□□□ -0.04
SHKBP1-212ENST00000596163 ZNF540Q8NDQ6 660 aa14.81□□□□□ -0.04
SHKBP1-212ENST00000596163 ZNRF4Q8WWF5 429 aa14.81□□□□□ -0.04
SHKBP1-212ENST00000596163 SPTSSAQ969W0 71 aa14.81□□□□□ -0.04
SHKBP1-212ENST00000596163 APOBEC3DQ96AK3 386 aaPredicted RBP14.81□□□□□ -0.04
SHKBP1-212ENST00000596163 RBM4BQ9BQ04 359 aaKnown RBP14.81□□□□□ -0.04
SHKBP1-212ENST00000596163 MYEF2Q9P2K5 600 aaKnown RBP14.81□□□□□ -0.04
SHKBP1-212ENST00000596163 OAZ3Q9UMX2 235 aa14.81□□□□□ -0.04
SHKBP1-212ENST00000596163 COMMD3-BMI1R4GMX3 469 aa14.81□□□□□ -0.04
SHKBP1-212ENST00000596163 LOC390937A0A1W2PQ73 354 aa14.8□□□□□ -0.04
SHKBP1-212ENST00000596163 SMAD7O15105 426 aaKnown RBP14.8□□□□□ -0.04
SHKBP1-212ENST00000596163 CLUP10909 449 aa14.8□□□□□ -0.04
SHKBP1-212ENST00000596163 DAOP14920 347 aa14.8□□□□□ -0.04
SHKBP1-212ENST00000596163 IGFBP5P24593 272 aa14.8□□□□□ -0.04
SHKBP1-212ENST00000596163 TPTEP56180 551 aa14.8□□□□□ -0.04
SHKBP1-212ENST00000596163 MAD2L1BPQ15013 274 aaPredicted RBP14.8□□□□□ -0.04
SHKBP1-212ENST00000596163 TAF13Q15543 124 aa14.8□□□□□ -0.04
SHKBP1-212ENST00000596163 PCK2Q16822 640 aa14.8□□□□□ -0.04
SHKBP1-212ENST00000596163 ZMAT1Q5H9K5 638 aa14.8□□□□□ -0.04
SHKBP1-212ENST00000596163 SLC35D3Q5M8T2 416 aa14.8□□□□□ -0.04
SHKBP1-212ENST00000596163 LINC01590Q5TEZ4 76 aa14.8□□□□□ -0.04
SHKBP1-212ENST00000596163 CFAP77Q6ZQR2 320 aa14.8□□□□□ -0.04
SHKBP1-212ENST00000596163 CXXC5Q7LFL8 322 aaKnown RBP14.8□□□□□ -0.04
SHKBP1-212ENST00000596163 CPOQ8IVL8 374 aa14.8□□□□□ -0.04
SHKBP1-212ENST00000596163 ZCCHC24Q8N2G6 241 aaKnown RBP14.8□□□□□ -0.04
SHKBP1-212ENST00000596163 UBASH3BQ8TF42 649 aa14.8□□□□□ -0.04
SHKBP1-212ENST00000596163 SLC7A6Q92536 515 aa14.8□□□□□ -0.04
SHKBP1-212ENST00000596163 INTS14Q96SY0 518 aa14.8□□□□□ -0.04
SHKBP1-212ENST00000596163 PKP2Q99959 881 aa14.8□□□□□ -0.04
SHKBP1-212ENST00000596163 TPK1Q9H3S4 243 aa14.8□□□□□ -0.04
SHKBP1-212ENST00000596163 MED20Q9H944 212 aa14.8□□□□□ -0.04
SHKBP1-212ENST00000596163 WDR76Q9H967 626 aa14.8□□□□□ -0.04
SHKBP1-212ENST00000596163 STARD10Q9Y365 291 aa14.8□□□□□ -0.04
SHKBP1-212ENST00000596163 ORC6Q9Y5N6 252 aa14.8□□□□□ -0.04
SHKBP1-212ENST00000596163 MAP1AP78559 2803 aaPredicted RBP14.79□□□□□ -0.04
SHKBP1-212ENST00000596163 SAC3D1A6NKF1 404 aa14.79□□□□□ -0.04
SHKBP1-212ENST00000596163 C17orf100A8MU93 164 aa14.79□□□□□ -0.04
SHKBP1-212ENST00000596163 RNF223E7ERA6 249 aa14.79□□□□□ -0.04
SHKBP1-212ENST00000596163 F5H5K5 113 aa14.79□□□□□ -0.04
SHKBP1-212ENST00000596163 MITFO75030 526 aaPredicted RBP14.79□□□□□ -0.04
SHKBP1-212ENST00000596163 DBHP09172 617 aa14.79□□□□□ -0.04
SHKBP1-212ENST00000596163 NAT2P11245 290 aa14.79□□□□□ -0.04
SHKBP1-212ENST00000596163 RPS7P62081 194 aaKnown RBP14.79□□□□□ -0.04
SHKBP1-212ENST00000596163 CARTPTQ16568 116 aa14.79□□□□□ -0.04
SHKBP1-212ENST00000596163 ALKBH6Q3KRA9 238 aa14.79□□□□□ -0.04
SHKBP1-212ENST00000596163 KLHL12Q53G59 568 aa14.79□□□□□ -0.04
SHKBP1-212ENST00000596163 DCXRQ7Z4W1 244 aa14.79□□□□□ -0.04
SHKBP1-212ENST00000596163 ERI1Q8IV48 349 aaKnown RBP14.79□□□□□ -0.04
SHKBP1-212ENST00000596163 C10orf105Q8TEF2 133 aa14.79□□□□□ -0.04
SHKBP1-212ENST00000596163 MAP6Q96JE9 813 aa14.79□□□□□ -0.04
SHKBP1-212ENST00000596163 PIMREGQ9BSJ6 248 aa14.79□□□□□ -0.04
SHKBP1-212ENST00000596163 HCAR1Q9BXC0 346 aa14.79□□□□□ -0.04
SHKBP1-212ENST00000596163 MARCH7Q9H992 704 aa14.79□□□□□ -0.04
SHKBP1-212ENST00000596163 S100A14Q9HCY8 104 aa14.79□□□□□ -0.04
SHKBP1-212ENST00000596163 NKIRAS2Q9NYR9 191 aa14.79□□□□□ -0.04
SHKBP1-212ENST00000596163 H2AFY2Q9P0M6 372 aaPredicted RBP14.79□□□□□ -0.04
SHKBP1-212ENST00000596163 TEP1Q99973 2627 aaKnown RBP14.78□□□□□ -0.04
SHKBP1-212ENST00000596163 IGHV4-30-2A0A087WSY4 118 aa14.78□□□□□ -0.04
SHKBP1-212ENST00000596163 H3BNX3 289 aa14.78□□□□□ -0.04
SHKBP1-212ENST00000596163 TIMM8AO60220 97 aaPredicted RBP14.78□□□□□ -0.04
SHKBP1-212ENST00000596163 LY6HO94772 140 aa14.78□□□□□ -0.04
SHKBP1-212ENST00000596163 MPV17P39210 176 aa14.78□□□□□ -0.04
SHKBP1-212ENST00000596163 SLC15A1P46059 708 aa14.78□□□□□ -0.04
SHKBP1-212ENST00000596163 ZNF81P51508 661 aa14.78□□□□□ -0.04
SHKBP1-212ENST00000596163 KRTAP27-1Q3LI81 207 aa14.78□□□□□ -0.04
SHKBP1-212ENST00000596163 FAM209AQ5JX71 171 aa14.78□□□□□ -0.04
SHKBP1-212ENST00000596163 LCN1P1Q5VSP4 162 aa14.78□□□□□ -0.04
SHKBP1-212ENST00000596163 SLX4IPQ5VYV7 408 aa14.78□□□□□ -0.04
SHKBP1-212ENST00000596163 CIARTQ8N365 385 aaPredicted RBP14.78□□□□□ -0.04
SHKBP1-212ENST00000596163 ZNF786Q8N393 782 aa14.78□□□□□ -0.04
SHKBP1-212ENST00000596163 OR6N2Q8NGY6 317 aa14.78□□□□□ -0.04
SHKBP1-212ENST00000596163 STMN2Q93045 179 aa14.78□□□□□ -0.04
SHKBP1-212ENST00000596163 CMBLQ96DG6 245 aa14.78□□□□□ -0.04
SHKBP1-212ENST00000596163 SLAMF6Q96DU3 332 aa14.78□□□□□ -0.04
SHKBP1-212ENST00000596163 DIRC2Q96SL1 478 aa14.78□□□□□ -0.04
SHKBP1-212ENST00000596163 PNRC2Q9NPJ4 139 aaKnown RBP14.78□□□□□ -0.04
SHKBP1-212ENST00000596163 CENPMQ9NSP4 180 aa14.78□□□□□ -0.04
SHKBP1-212ENST00000596163 DECR2Q9NUI1 292 aa14.78□□□□□ -0.04
SHKBP1-212ENST00000596163 DDX28Q9NUL7 540 aaKnown RBP14.78□□□□□ -0.04
SHKBP1-212ENST00000596163 ZAR1LA6NP61 321 aa14.77□□□□□ -0.05
SHKBP1-212ENST00000596163 APOC1P02654 83 aa14.77□□□□□ -0.05
SHKBP1-212ENST00000596163 LCATP04180 440 aa14.77□□□□□ -0.05
SHKBP1-212ENST00000596163 ACSM4P0C7M7 580 aa14.77□□□□□ -0.05
SHKBP1-212ENST00000596163 RAC2P15153 192 aa14.77□□□□□ -0.05
SHKBP1-212ENST00000596163 RPS27P42677 84 aaKnown RBP14.77□□□□□ -0.05
SHKBP1-212ENST00000596163 GRB2P62993 217 aaKnown RBP14.77□□□□□ -0.05
SHKBP1-212ENST00000596163 MRPS11P82912 194 aaKnown RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms