RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 SIGLEC11Q96RL6 698 aa14.35□□□□□ -0.11
CCDC9-202ENST00000595659 NMNAT3Q96T66 252 aa14.35□□□□□ -0.11
CCDC9-202ENST00000595659 WDR76Q9H967 626 aa14.35□□□□□ -0.11
CCDC9-202ENST00000595659 IL19Q9UHD0 177 aa14.35□□□□□ -0.11
CCDC9-202ENST00000595659 B9D1Q9UPM9 204 aa14.35□□□□□ -0.11
CCDC9-202ENST00000595659 LHFPL6Q9Y693 200 aa14.35□□□□□ -0.11
CCDC9-202ENST00000595659 TRAPPC2LH3BP13 241 aa14.34□□□□□ -0.11
CCDC9-202ENST00000595659 TRIM77I1YAP6 450 aa14.34□□□□□ -0.11
CCDC9-202ENST00000595659 FOXH1O75593 365 aa14.34□□□□□ -0.11
CCDC9-202ENST00000595659 TXNDC12O95881 172 aa14.34□□□□□ -0.11
CCDC9-202ENST00000595659 RAC2P15153 192 aa14.34□□□□□ -0.11
CCDC9-202ENST00000595659 TUBG1P23258 451 aa14.34□□□□□ -0.11
CCDC9-202ENST00000595659 BTG1P62324 171 aa14.34□□□□□ -0.11
CCDC9-202ENST00000595659 KCNMB1Q16558 191 aa14.34□□□□□ -0.11
CCDC9-202ENST00000595659 RFX4Q33E94 735 aa14.34□□□□□ -0.11
CCDC9-202ENST00000595659 USP43Q70EL4 1123 aa14.34□□□□□ -0.11
CCDC9-202ENST00000595659 LRRC28Q86X40 367 aaPredicted RBP14.34□□□□□ -0.11
CCDC9-202ENST00000595659 OR6V1Q8N148 313 aa14.34□□□□□ -0.11
CCDC9-202ENST00000595659 KLHL36Q8N4N3 616 aa14.34□□□□□ -0.11
CCDC9-202ENST00000595659 ZNF283Q8N7M2 679 aa14.34□□□□□ -0.11
CCDC9-202ENST00000595659 ZNF420Q8TAQ5 688 aaPredicted RBP14.34□□□□□ -0.11
CCDC9-202ENST00000595659 FANK1Q8TC84 345 aa14.34□□□□□ -0.11
CCDC9-202ENST00000595659 FAM216AQ8WUB2 273 aa14.34□□□□□ -0.11
CCDC9-202ENST00000595659 PYURFQ96I23 114 aa14.34□□□□□ -0.11
CCDC9-202ENST00000595659 DHRS1Q96LJ7 313 aa14.34□□□□□ -0.11
CCDC9-202ENST00000595659 SUCNR1Q9BXA5 334 aa14.34□□□□□ -0.11
CCDC9-202ENST00000595659 OR52D1Q9H346 318 aa14.34□□□□□ -0.11
CCDC9-202ENST00000595659 FN3KQ9H479 309 aa14.34□□□□□ -0.11
CCDC9-202ENST00000595659 PATZ1Q9HBE1 687 aaKnown RBP14.34□□□□□ -0.11
CCDC9-202ENST00000595659 KRCC1Q9NPI7 259 aaPredicted RBP14.34□□□□□ -0.11
CCDC9-202ENST00000595659 ESM1Q9NQ30 184 aa14.34□□□□□ -0.11
CCDC9-202ENST00000595659 TUBG2Q9NRH3 451 aa14.34□□□□□ -0.11
CCDC9-202ENST00000595659 IGLV1-36A0A0B4J1U3 117 aa14.33□□□□□ -0.12
CCDC9-202ENST00000595659 GADD45GO95257 159 aa14.33□□□□□ -0.12
CCDC9-202ENST00000595659 HIST1H1CP16403 213 aaKnown RBP14.33□□□□□ -0.12
CCDC9-202ENST00000595659 GATA3P23771 443 aa14.33□□□□□ -0.12
CCDC9-202ENST00000595659 CRABP1P29762 137 aa14.33□□□□□ -0.12
CCDC9-202ENST00000595659 JAZF1Q86VZ6 243 aa14.33□□□□□ -0.12
CCDC9-202ENST00000595659 LINC00346Q8IVM7 164 aa14.33□□□□□ -0.12
CCDC9-202ENST00000595659 SPICQ8N5J4 248 aa14.33□□□□□ -0.12
CCDC9-202ENST00000595659 BHLHE23Q8NDY6 225 aa14.33□□□□□ -0.12
CCDC9-202ENST00000595659 DEFB108BQ8NET1 73 aa14.33□□□□□ -0.12
CCDC9-202ENST00000595659 GJC3Q8NFK1 279 aa14.33□□□□□ -0.12
CCDC9-202ENST00000595659 OR5L1Q8NGL2 311 aa14.33□□□□□ -0.12
CCDC9-202ENST00000595659 COG8Q96MW5 612 aa14.33□□□□□ -0.12
CCDC9-202ENST00000595659 ZNF582Q96NG8 517 aaPredicted RBP14.33□□□□□ -0.12
CCDC9-202ENST00000595659 GORASP2Q9H8Y8 452 aa14.33□□□□□ -0.12
CCDC9-202ENST00000595659 GCM1Q9NP62 436 aa14.33□□□□□ -0.12
CCDC9-202ENST00000595659 F5H5K5 113 aa14.32□□□□□ -0.12
CCDC9-202ENST00000595659 TMEM178BH3BS89 294 aa14.32□□□□□ -0.12
CCDC9-202ENST00000595659 SURF4O15260 269 aa14.32□□□□□ -0.12
CCDC9-202ENST00000595659 OR10H3O60404 316 aa14.32□□□□□ -0.12
CCDC9-202ENST00000595659 CYB5R3P00387 301 aaPredicted RBP14.32□□□□□ -0.12
CCDC9-202ENST00000595659 SEMG1P04279 462 aa14.32□□□□□ -0.12
CCDC9-202ENST00000595659 SELEP16581 610 aa14.32□□□□□ -0.12
CCDC9-202ENST00000595659 PRDX6P30041 224 aa14.32□□□□□ -0.12
CCDC9-202ENST00000595659 SLC6A6P31641 620 aa14.32□□□□□ -0.12
CCDC9-202ENST00000595659 SLC6A9P48067 706 aa14.32□□□□□ -0.12
CCDC9-202ENST00000595659 MMP16P51512 607 aa14.32□□□□□ -0.12
CCDC9-202ENST00000595659 HIST1H3AP68431 136 aa14.32□□□□□ -0.12
CCDC9-202ENST00000595659 RSPO1Q2MKA7 263 aaPredicted RBP14.32□□□□□ -0.12
CCDC9-202ENST00000595659 TMEM155Q4W5P6 130 aa14.32□□□□□ -0.12
CCDC9-202ENST00000595659 SLC35F1Q5T1Q4 408 aa14.32□□□□□ -0.12
CCDC9-202ENST00000595659 HIST2H3PS2Q5TEC6 136 aa14.32□□□□□ -0.12
CCDC9-202ENST00000595659 DNM1P34Q6PK57 102 aa14.32□□□□□ -0.12
CCDC9-202ENST00000595659 FBXW12Q6X9E4 464 aa14.32□□□□□ -0.12
CCDC9-202ENST00000595659 CFAP77Q6ZQR2 320 aa14.32□□□□□ -0.12
CCDC9-202ENST00000595659 HIST2H3AQ71DI3 136 aa14.32□□□□□ -0.12
CCDC9-202ENST00000595659 NAA40Q86UY6 237 aa14.32□□□□□ -0.12
CCDC9-202ENST00000595659 ZDHHC22Q8N966 263 aa14.32□□□□□ -0.12
CCDC9-202ENST00000595659 SDR9C7Q8NEX9 313 aa14.32□□□□□ -0.12
CCDC9-202ENST00000595659 OR8G5Q8NG78 346 aa14.32□□□□□ -0.12
CCDC9-202ENST00000595659 MEGF10Q96KG7 1140 aa14.32□□□□□ -0.12
CCDC9-202ENST00000595659 JMJD8Q96S16 334 aa14.32□□□□□ -0.12
CCDC9-202ENST00000595659 IFT27Q9BW83 186 aa14.32□□□□□ -0.12
CCDC9-202ENST00000595659 PLA2G12AQ9BZM1 189 aa14.32□□□□□ -0.12
CCDC9-202ENST00000595659 RPRD1BQ9NQG5 326 aaKnown RBP14.32□□□□□ -0.12
CCDC9-202ENST00000595659 PPIAL4AQ9Y536 164 aa14.32□□□□□ -0.12
CCDC9-202ENST00000595659 TMEM89A2RUT3 159 aa14.31□□□□□ -0.12
CCDC9-202ENST00000595659 OR6C68A6NDL8 312 aa14.31□□□□□ -0.12
CCDC9-202ENST00000595659 CEACAM18A8MTB9 384 aa14.31□□□□□ -0.12
CCDC9-202ENST00000595659 F5H5P2 479 aa14.31□□□□□ -0.12
CCDC9-202ENST00000595659 SNX3O60493 162 aa14.31□□□□□ -0.12
CCDC9-202ENST00000595659 RENP00797 406 aa14.31□□□□□ -0.12
CCDC9-202ENST00000595659 FSHBP01225 129 aa14.31□□□□□ -0.12
CCDC9-202ENST00000595659 HLA-DQA2P01906 255 aa14.31□□□□□ -0.12
CCDC9-202ENST00000595659 HLA-DPB1P04440 258 aa14.31□□□□□ -0.12
CCDC9-202ENST00000595659 FPR2P25090 351 aa14.31□□□□□ -0.12
CCDC9-202ENST00000595659 RGS6P49758 472 aa14.31□□□□□ -0.12
CCDC9-202ENST00000595659 SMIM11AP58511 58 aa14.31□□□□□ -0.12
CCDC9-202ENST00000595659 ZNF154Q13106 437 aa14.31□□□□□ -0.12
CCDC9-202ENST00000595659 FAM201AQ5SY85 155 aa14.31□□□□□ -0.12
CCDC9-202ENST00000595659 MOGAT3Q86VF5 341 aa14.31□□□□□ -0.12
CCDC9-202ENST00000595659 SIGLECL1Q8N7X8 197 aa14.31□□□□□ -0.12
CCDC9-202ENST00000595659 C3orf56Q8N813 242 aa14.31□□□□□ -0.12
CCDC9-202ENST00000595659 SLC26A10Q8NG04 563 aa14.31□□□□□ -0.12
CCDC9-202ENST00000595659 OR13G1Q8NGZ3 307 aa14.31□□□□□ -0.12
CCDC9-202ENST00000595659 APOBEC3DQ96AK3 386 aaPredicted RBP14.31□□□□□ -0.12
CCDC9-202ENST00000595659 MCUR1Q96AQ8 359 aa14.31□□□□□ -0.12
CCDC9-202ENST00000595659 DUX5Q96PT3 197 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms