RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 RAB1BQ9H0U4 201 aa22.13■■□□□ 1.13
TRIM28-204ENST00000594806 PNRC2Q9NPJ4 139 aaKnown RBP22.13■■□□□ 1.13
TRIM28-204ENST00000594806 DDX28Q9NUL7 540 aaKnown RBP22.13■■□□□ 1.13
TRIM28-204ENST00000594806 DUSP13Q9UII6 198 aa22.13■■□□□ 1.13
TRIM28-204ENST00000594806 OTOGQ6ZRI0 2925 aa22.12■■□□□ 1.13
TRIM28-204ENST00000594806 M0R233 179 aa22.12■■□□□ 1.13
TRIM28-204ENST00000594806 TLX2O43763 284 aaPredicted RBP22.12■■□□□ 1.13
TRIM28-204ENST00000594806 PRKYO43930 277 aa22.12■■□□□ 1.13
TRIM28-204ENST00000594806 NUDT6P53370 316 aa22.12■■□□□ 1.13
TRIM28-204ENST00000594806 RPS7P62081 194 aaKnown RBP22.12■■□□□ 1.13
TRIM28-204ENST00000594806 NXNL2Q5VZ03 156 aa22.12■■□□□ 1.13
TRIM28-204ENST00000594806 TMEM154Q6P9G4 183 aa22.12■■□□□ 1.13
TRIM28-204ENST00000594806 RFPL4BQ6ZWI9 263 aa22.12■■□□□ 1.13
TRIM28-204ENST00000594806 TGIF2LYQ8IUE0 185 aa22.12■■□□□ 1.13
TRIM28-204ENST00000594806 ERI1Q8IV48 349 aaKnown RBP22.12■■□□□ 1.13
TRIM28-204ENST00000594806 TCEANCQ8N8B7 351 aa22.12■■□□□ 1.13
TRIM28-204ENST00000594806 ZNF454Q8N9F8 522 aa22.12■■□□□ 1.13
TRIM28-204ENST00000594806 OR5L1Q8NGL2 311 aa22.12■■□□□ 1.13
TRIM28-204ENST00000594806 SPTSSAQ969W0 71 aa22.12■■□□□ 1.13
TRIM28-204ENST00000594806 APOBEC3DQ96AK3 386 aaPredicted RBP22.12■■□□□ 1.13
TRIM28-204ENST00000594806 MARS2Q96GW9 593 aaKnown RBP22.12■■□□□ 1.13
TRIM28-204ENST00000594806 DYNLRB1Q9NP97 96 aa22.12■■□□□ 1.13
TRIM28-204ENST00000594806 C8orf4Q9NR00 106 aa22.12■■□□□ 1.13
TRIM28-204ENST00000594806 NGFP01138 241 aa22.11■■□□□ 1.13
TRIM28-204ENST00000594806 IGHV3-13P01766 116 aa22.11■■□□□ 1.13
TRIM28-204ENST00000594806 IGHV4-39P01824 125 aa22.11■■□□□ 1.13
TRIM28-204ENST00000594806 POLR2IP36954 125 aaKnown RBP22.11■■□□□ 1.13
TRIM28-204ENST00000594806 EFNA4P52798 201 aa22.11■■□□□ 1.13
TRIM28-204ENST00000594806 TPTEP56180 551 aa22.11■■□□□ 1.13
TRIM28-204ENST00000594806 CDC42P60953 191 aa22.11■■□□□ 1.13
TRIM28-204ENST00000594806 ERVS71-1P61550 626 aa22.11■■□□□ 1.13
TRIM28-204ENST00000594806 APOFQ13790 326 aa22.11■■□□□ 1.13
TRIM28-204ENST00000594806 OR8J1Q8NGP2 316 aa22.11■■□□□ 1.13
TRIM28-204ENST00000594806 OR6N2Q8NGY6 317 aa22.11■■□□□ 1.13
TRIM28-204ENST00000594806 SLC25A40Q8TBP6 338 aa22.11■■□□□ 1.13
TRIM28-204ENST00000594806 TRUB1Q8WWH5 349 aaKnown RBP22.11■■□□□ 1.13
TRIM28-204ENST00000594806 SLC7A6Q92536 515 aa22.11■■□□□ 1.13
TRIM28-204ENST00000594806 ZMYND19Q96E35 227 aaPredicted RBP22.11■■□□□ 1.13
TRIM28-204ENST00000594806 HRASLS5Q96KN8 279 aa22.11■■□□□ 1.13
TRIM28-204ENST00000594806 TEAD3Q99594 435 aa22.11■■□□□ 1.13
TRIM28-204ENST00000594806 SYT3Q9BQG1 590 aa22.11■■□□□ 1.13
TRIM28-204ENST00000594806 A0A1W2PPW3 197 aa22.1■■□□□ 1.13
TRIM28-204ENST00000594806 ANKRD65E5RJM6 399 aa22.1■■□□□ 1.13
TRIM28-204ENST00000594806 F12P00748 615 aaPredicted RBP22.1■■□□□ 1.13
TRIM28-204ENST00000594806 DBHP09172 617 aa22.1■■□□□ 1.13
TRIM28-204ENST00000594806 RPS27P42677 84 aaKnown RBP22.1■■□□□ 1.13
TRIM28-204ENST00000594806 SLC15A1P46059 708 aa22.1■■□□□ 1.13
TRIM28-204ENST00000594806 RSPO1Q2MKA7 263 aaPredicted RBP22.1■■□□□ 1.13
TRIM28-204ENST00000594806 DPY19L4Q7Z388 723 aa22.1■■□□□ 1.13
TRIM28-204ENST00000594806 GID4Q8IVV7 300 aa22.1■■□□□ 1.13
TRIM28-204ENST00000594806 BBS1Q8NFJ9 593 aa22.1■■□□□ 1.13
TRIM28-204ENST00000594806 KLF14Q8TD94 323 aaPredicted RBP22.1■■□□□ 1.13
TRIM28-204ENST00000594806 ST7LQ8TDW4 575 aa22.1■■□□□ 1.13
TRIM28-204ENST00000594806 NEU4Q8WWR8 484 aaPredicted RBP22.1■■□□□ 1.13
TRIM28-204ENST00000594806 VRK1Q99986 396 aaPredicted RBP22.1■■□□□ 1.13
TRIM28-204ENST00000594806 OR2J1Q9GZK6 312 aa22.1■■□□□ 1.13
TRIM28-204ENST00000594806 SLC22A31A6NKX4 558 aa22.09■■□□□ 1.13
TRIM28-204ENST00000594806 ZNF878C9JN71 531 aa22.09■■□□□ 1.13
TRIM28-204ENST00000594806 MT-ND5P03915 603 aa22.09■■□□□ 1.13
TRIM28-204ENST00000594806 ANPEPP15144 967 aa22.09■■□□□ 1.13
TRIM28-204ENST00000594806 LIPAP38571 399 aa22.09■■□□□ 1.13
TRIM28-204ENST00000594806 DSCR9P59020 149 aa22.09■■□□□ 1.13
TRIM28-204ENST00000594806 EIF2B1Q14232 305 aaKnown RBP22.09■■□□□ 1.13
TRIM28-204ENST00000594806 RCN1Q15293 331 aa22.09■■□□□ 1.13
TRIM28-204ENST00000594806 AADACL4Q5VUY2 407 aa22.09■■□□□ 1.13
TRIM28-204ENST00000594806 MEPCEQ7L2J0 689 aaKnown RBP22.09■■□□□ 1.13
TRIM28-204ENST00000594806 LRP11Q86VZ4 500 aa22.09■■□□□ 1.13
TRIM28-204ENST00000594806 OR10S1Q8NGN2 331 aa22.09■■□□□ 1.13
TRIM28-204ENST00000594806 SNX33Q8WV41 574 aa22.09■■□□□ 1.13
TRIM28-204ENST00000594806 SLAMF6Q96DU3 332 aa22.09■■□□□ 1.13
TRIM28-204ENST00000594806 RDH12Q96NR8 316 aa22.09■■□□□ 1.13
TRIM28-204ENST00000594806 C1QTNF5Q9BXJ0 243 aa22.09■■□□□ 1.13
TRIM28-204ENST00000594806 TOR3AQ9H497 397 aa22.09■■□□□ 1.13
TRIM28-204ENST00000594806 CGGBP1Q9UFW8 167 aaPredicted RBP22.09■■□□□ 1.13
TRIM28-204ENST00000594806 FZR1Q9UM11 496 aa22.09■■□□□ 1.13
TRIM28-204ENST00000594806 AKAP9Q99996 3911 aa22.09■■□□□ 1.13
TRIM28-204ENST00000594806 ERICH4A6NGS2 130 aa22.08■■□□□ 1.13
TRIM28-204ENST00000594806 F5H5K5 113 aa22.08■■□□□ 1.13
TRIM28-204ENST00000594806 ACSM4P0C7M7 580 aa22.08■■□□□ 1.13
TRIM28-204ENST00000594806 OTX1P32242 354 aaPredicted RBP22.08■■□□□ 1.13
TRIM28-204ENST00000594806 GRB2P62993 217 aaKnown RBP22.08■■□□□ 1.13
TRIM28-204ENST00000594806 TAF13Q15543 124 aa22.08■■□□□ 1.13
TRIM28-204ENST00000594806 NKPD1Q17RQ9 610 aa22.08■■□□□ 1.13
TRIM28-204ENST00000594806 COLCA1Q6ZS62 124 aa22.08■■□□□ 1.13
TRIM28-204ENST00000594806 WFDC11Q8NEX6 87 aa22.08■■□□□ 1.13
TRIM28-204ENST00000594806 OTOSQ8NHW6 89 aa22.08■■□□□ 1.13
TRIM28-204ENST00000594806 IL4I1Q96RQ9 567 aa22.08■■□□□ 1.13
TRIM28-204ENST00000594806 KCNJ15Q99712 375 aa22.08■■□□□ 1.13
TRIM28-204ENST00000594806 SLC29A1Q99808 456 aa22.08■■□□□ 1.13
TRIM28-204ENST00000594806 COPS4Q9BT78 406 aa22.08■■□□□ 1.13
TRIM28-204ENST00000594806 YIPF3Q9GZM5 350 aa22.08■■□□□ 1.13
TRIM28-204ENST00000594806 MYOZ1Q9NP98 299 aaPredicted RBP22.08■■□□□ 1.13
TRIM28-204ENST00000594806 HAO2Q9NYQ3 351 aa22.08■■□□□ 1.13
TRIM28-204ENST00000594806 TAAR3PQ9P1P4 343 aa22.08■■□□□ 1.13
TRIM28-204ENST00000594806 ITPR3Q14573 2671 aa22.08■■□□□ 1.12
TRIM28-204ENST00000594806 CCDC182A6NF36 153 aa22.07■■□□□ 1.12
TRIM28-204ENST00000594806 E9PQ18 207 aa22.07■■□□□ 1.12
TRIM28-204ENST00000594806 M0R135 149 aa22.07■■□□□ 1.12
TRIM28-204ENST00000594806 NDUFS7O75251 213 aa22.07■■□□□ 1.12
TRIM28-204ENST00000594806 CLPTM1O96005 669 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms