RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 NAA40Q86UY6 237 aa8.35□□□□□ -1.07
DDX39A-220ENST00000593008 P2RY8Q86VZ1 359 aa8.35□□□□□ -1.07
DDX39A-220ENST00000593008 CCDC36Q8IYA8 594 aa8.35□□□□□ -1.07
DDX39A-220ENST00000593008 C17orf78Q8N4C9 275 aa8.35□□□□□ -1.07
DDX39A-220ENST00000593008 THEM6Q8WUY1 208 aa8.35□□□□□ -1.07
DDX39A-220ENST00000593008 NINJ1Q92982 152 aa8.35□□□□□ -1.07
DDX39A-220ENST00000593008 RFKQ969G6 155 aa8.35□□□□□ -1.07
DDX39A-220ENST00000593008 RNF166Q96A37 237 aaPredicted RBP8.35□□□□□ -1.07
DDX39A-220ENST00000593008 ISG20L2Q9H9L3 353 aaKnown RBP8.35□□□□□ -1.07
DDX39A-220ENST00000593008 CCNB1IP1Q9NPC3 277 aa8.35□□□□□ -1.07
DDX39A-220ENST00000593008 CENPMQ9NSP4 180 aa8.35□□□□□ -1.07
DDX39A-220ENST00000593008 ACOXLQ9NUZ1 547 aa8.35□□□□□ -1.07
DDX39A-220ENST00000593008 HAO2Q9NYQ3 351 aa8.35□□□□□ -1.07
DDX39A-220ENST00000593008 PLEK2Q9NYT0 353 aa8.35□□□□□ -1.07
DDX39A-220ENST00000593008 MRM2Q9UI43 246 aaKnown RBP8.35□□□□□ -1.07
DDX39A-220ENST00000593008 EXOGQ9Y2C4 368 aaKnown RBP8.35□□□□□ -1.07
DDX39A-220ENST00000593008 AMDHD2Q9Y303 409 aa8.35□□□□□ -1.07
DDX39A-220ENST00000593008 HIVEP1P15822 2718 aa8.35□□□□□ -1.07
DDX39A-220ENST00000593008 CADP27708 2225 aa8.34□□□□□ -1.07
DDX39A-220ENST00000593008 RTTNQ86VV8 2226 aa8.34□□□□□ -1.07
DDX39A-220ENST00000593008 E9PI62 339 aa8.34□□□□□ -1.07
DDX39A-220ENST00000593008 RAB36O95755 333 aa8.34□□□□□ -1.07
DDX39A-220ENST00000593008 FADS2O95864 444 aaKnown RBP8.34□□□□□ -1.07
DDX39A-220ENST00000593008 ABHD16AO95870 558 aa8.34□□□□□ -1.07
DDX39A-220ENST00000593008 LALBAP00709 142 aa8.34□□□□□ -1.07
DDX39A-220ENST00000593008 IGKV3-15P01624 115 aa8.34□□□□□ -1.07
DDX39A-220ENST00000593008 IGLV1-44P01699 117 aa8.34□□□□□ -1.07
DDX39A-220ENST00000593008 IGHA1P01876 353 aa8.34□□□□□ -1.07
DDX39A-220ENST00000593008 LYNP07948 512 aa8.34□□□□□ -1.07
DDX39A-220ENST00000593008 CD53P19397 219 aa8.34□□□□□ -1.07
DDX39A-220ENST00000593008 CCNOP22674 350 aa8.34□□□□□ -1.07
DDX39A-220ENST00000593008 ATP6V1E1P36543 226 aa8.34□□□□□ -1.07
DDX39A-220ENST00000593008 OPRL1P41146 370 aa8.34□□□□□ -1.07
DDX39A-220ENST00000593008 PRKXP51817 358 aa8.34□□□□□ -1.07
DDX39A-220ENST00000593008 ERVS71-1P61550 626 aa8.34□□□□□ -1.07
DDX39A-220ENST00000593008 SLC35A2P78381 396 aa8.34□□□□□ -1.07
DDX39A-220ENST00000593008 BSPH1Q075Z2 132 aa8.34□□□□□ -1.07
DDX39A-220ENST00000593008 ST3GAL4Q11206 333 aa8.34□□□□□ -1.07
DDX39A-220ENST00000593008 MED21Q13503 144 aa8.34□□□□□ -1.07
DDX39A-220ENST00000593008 RAB35Q15286 201 aa8.34□□□□□ -1.07
DDX39A-220ENST00000593008 MSMPQ1L6U9 139 aa8.34□□□□□ -1.07
DDX39A-220ENST00000593008 SLC36A2Q495M3 483 aa8.34□□□□□ -1.07
DDX39A-220ENST00000593008 NRN1LQ496H8 165 aa8.34□□□□□ -1.07
DDX39A-220ENST00000593008 TMEM255AQ5JRV8 349 aa8.34□□□□□ -1.07
DDX39A-220ENST00000593008 TEX30Q5JUR7 227 aa8.34□□□□□ -1.07
DDX39A-220ENST00000593008 ZNF684Q5T5D7 378 aa8.34□□□□□ -1.07
DDX39A-220ENST00000593008 XAF1Q6GPH4 301 aa8.34□□□□□ -1.07
DDX39A-220ENST00000593008 ADAM5Q6NVV9 412 aa8.34□□□□□ -1.07
DDX39A-220ENST00000593008 ZNF704Q6ZNC4 412 aaPredicted RBP8.34□□□□□ -1.07
DDX39A-220ENST00000593008 RFPL4BQ6ZWI9 263 aa8.34□□□□□ -1.07
DDX39A-220ENST00000593008 ZNF101Q8IZC7 436 aa8.34□□□□□ -1.07
DDX39A-220ENST00000593008 ZNF540Q8NDQ6 660 aa8.34□□□□□ -1.07
DDX39A-220ENST00000593008 KBTBD8Q8NFY9 601 aa8.34□□□□□ -1.07
DDX39A-220ENST00000593008 OR1F12Q8NHA8 337 aa8.34□□□□□ -1.07
DDX39A-220ENST00000593008 RNF133Q8WVZ7 376 aa8.34□□□□□ -1.07
DDX39A-220ENST00000593008 PPP1R14AQ96A00 147 aa8.34□□□□□ -1.07
DDX39A-220ENST00000593008 BOD1Q96IK1 185 aa8.34□□□□□ -1.07
DDX39A-220ENST00000593008 Q96MT0 163 aa8.34□□□□□ -1.07
DDX39A-220ENST00000593008 SIGLEC11Q96RL6 698 aa8.34□□□□□ -1.07
DDX39A-220ENST00000593008 COPS4Q9BT78 406 aa8.34□□□□□ -1.07
DDX39A-220ENST00000593008 CDADC1Q9BWV3 514 aa8.34□□□□□ -1.07
DDX39A-220ENST00000593008 Q9H521 79 aa8.34□□□□□ -1.07
DDX39A-220ENST00000593008 FGF20Q9NP95 211 aaPredicted RBP8.34□□□□□ -1.07
DDX39A-220ENST00000593008 CRNNQ9UBG3 495 aaPredicted RBP8.34□□□□□ -1.07
DDX39A-220ENST00000593008 LAMP5Q9UJQ1 280 aa8.34□□□□□ -1.07
DDX39A-220ENST00000593008 IKZF2Q9UKS7 526 aa8.34□□□□□ -1.07
DDX39A-220ENST00000593008 RPL36Q9Y3U8 105 aaKnown RBP8.34□□□□□ -1.07
DDX39A-220ENST00000593008 LRP12Q9Y561 859 aa8.34□□□□□ -1.07
DDX39A-220ENST00000593008 TIMM10BQ9Y5J6 103 aa8.34□□□□□ -1.07
DDX39A-220ENST00000593008 N6AMT1Q9Y5N5 214 aa8.34□□□□□ -1.07
DDX39A-220ENST00000593008 F8P00451 2351 aa8.33□□□□□ -1.08
DDX39A-220ENST00000593008 IGHV2OR16-5A0A0B4J2B6 119 aa8.33□□□□□ -1.08
DDX39A-220ENST00000593008 C5orf49A4QMS7 147 aa8.33□□□□□ -1.08
DDX39A-220ENST00000593008 ZNF670-ZNF695F2Z2N8 137 aa8.33□□□□□ -1.08
DDX39A-220ENST00000593008 F5H5K5 113 aa8.33□□□□□ -1.08
DDX39A-220ENST00000593008 H3BSH0 61 aa8.33□□□□□ -1.08
DDX39A-220ENST00000593008 GPRIN2O60269 458 aa8.33□□□□□ -1.08
DDX39A-220ENST00000593008 RPP14O95059 124 aaKnown RBP8.33□□□□□ -1.08
DDX39A-220ENST00000593008 PNPP00491 289 aa8.33□□□□□ -1.08
DDX39A-220ENST00000593008 NGFP01138 241 aa8.33□□□□□ -1.08
DDX39A-220ENST00000593008 PTHP01270 115 aa8.33□□□□□ -1.08
DDX39A-220ENST00000593008 FAM157BP0CG42 384 aa8.33□□□□□ -1.08
DDX39A-220ENST00000593008 PIPP12273 146 aaPredicted RBP8.33□□□□□ -1.08
DDX39A-220ENST00000593008 CBR1P16152 277 aa8.33□□□□□ -1.08
DDX39A-220ENST00000593008 PRRC2AP48634 2157 aaKnown RBP8.33□□□□□ -1.08
DDX39A-220ENST00000593008 NR1H2P55055 460 aa8.33□□□□□ -1.08
DDX39A-220ENST00000593008 OR12D2P58182 307 aa8.33□□□□□ -1.08
DDX39A-220ENST00000593008 GALK2Q01415 458 aa8.33□□□□□ -1.08
DDX39A-220ENST00000593008 SCRN3Q0VDG4 424 aa8.33□□□□□ -1.08
DDX39A-220ENST00000593008 RAB40BQ12829 278 aa8.33□□□□□ -1.08
DDX39A-220ENST00000593008 DEFB113Q30KQ7 82 aa8.33□□□□□ -1.08
DDX39A-220ENST00000593008 KRTAP27-1Q3LI81 207 aa8.33□□□□□ -1.08
DDX39A-220ENST00000593008 ELFN2Q5R3F8 820 aa8.33□□□□□ -1.08
DDX39A-220ENST00000593008 SPATA46Q5T0L3 261 aa8.33□□□□□ -1.08
DDX39A-220ENST00000593008 TMEM53Q6P2H8 277 aa8.33□□□□□ -1.08
DDX39A-220ENST00000593008 ZFP41Q8N8Y5 198 aa8.33□□□□□ -1.08
DDX39A-220ENST00000593008 SLC30A7Q8NEW0 376 aa8.33□□□□□ -1.08
DDX39A-220ENST00000593008 OR2AJ1Q8NGZ0 328 aa8.33□□□□□ -1.08
DDX39A-220ENST00000593008 NANOS1Q8WY41 292 aaKnown RBP8.33□□□□□ -1.08
DDX39A-220ENST00000593008 MUCL1Q96DR8 90 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms