RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 PRSS3P35030 304 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 THBS3P49746 956 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 SEC61A1P61619 476 aaKnown RBP5.63□□□□□ -1.51
SMAD4-212ENST00000591126 TCF15Q12870 199 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 Q499Y3 187 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 TFAP2EQ6VUC0 442 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 LINC00596Q86U02 117 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 C17orf82Q86X59 251 aaPredicted RBP5.63□□□□□ -1.51
SMAD4-212ENST00000591126 SFTPA1Q8IWL2 248 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 MINDY2Q8NBR6 621 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 THAP6Q8TBB0 222 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 ZNF596Q8TC21 504 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 ZNF721Q8TF20 911 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 PTPMT1Q8WUK0 201 aaPredicted RBP5.63□□□□□ -1.51
SMAD4-212ENST00000591126 FAM131CQ96AQ9 280 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 VWCEQ96DN2 955 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 PELI1Q96FA3 418 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 VSTM2LQ96N03 204 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 KCNK17Q96T54 332 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 TMEM59Q9BXS4 323 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 SYT4Q9H2B2 425 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 ZNF665Q9H7R5 613 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 MGAT4CQ9UBM8 478 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 CLN8Q9UBY8 286 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 ZNF69Q9UC07 566 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 IL17BQ9UHF5 180 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 RAB22AQ9UL26 194 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 SSUH2Q9Y2M2 353 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 COA3Q9Y2R0 106 aaPredicted RBP5.63□□□□□ -1.51
SMAD4-212ENST00000591126 TMEM30CPA0ZSE6 113 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 C5orf51A6NDU8 294 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 ARPC3O15145 178 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 XPNPEP2O43895 674 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 GMDSO60547 372 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 NCR1O76036 304 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 PLATP00750 562 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 RRASP10301 218 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 MXD1Q05195 221 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 FGL1Q08830 312 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 NRN1LQ496H8 165 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 NCR3LG1Q68D85 454 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 ZNF529Q6P280 563 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 ZNF793Q6ZN11 406 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 DCXRQ7Z4W1 244 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 ZNF695Q8IW36 515 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 MRPS24Q96EL2 167 aaKnown RBP5.63□□□□□ -1.51
SMAD4-212ENST00000591126 REEP6Q96HR9 211 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 ARHGDIGQ99819 225 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 RNF122Q9H9V4 155 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 ONECUT1Q9UBC0 465 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 FOXJ3Q9UPW0 622 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 PPP1R3CQ9UQK1 317 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 FBXO7Q9Y3I1 522 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 TRIM77I1YAP6 450 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 SORBS2O94875 1100 aaKnown RBP5.63□□□□□ -1.51
SMAD4-212ENST00000591126 TFP02787 698 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 STSP08842 583 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 DEFA4P12838 97 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 BLVRBP30043 206 aaPredicted RBP5.63□□□□□ -1.51
SMAD4-212ENST00000591126 IGLV3-21P80748 117 aaPredicted RBP5.63□□□□□ -1.51
SMAD4-212ENST00000591126 RPL18Q07020 188 aaKnown RBP5.63□□□□□ -1.51
SMAD4-212ENST00000591126 ZP4Q12836 540 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 NUMA1Q14980 2115 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 ZBTB37Q5TC79 503 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 ZNF773Q6PK81 442 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 PRSS48Q7RTY5 328 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 OR2Z1Q8NG97 314 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 OR4C3Q8NH37 302 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 CD300LFQ8TDQ1 290 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 ZNF775Q96BV0 537 aaPredicted RBP5.63□□□□□ -1.51
SMAD4-212ENST00000591126 C4orf45Q96LM5 186 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 SPSB2Q99619 263 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 LINC00470Q9BZP3 86 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 PLEKHF2Q9H8W4 249 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 CMC2Q9NRP2 79 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 ETAA1Q9NY74 926 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 METRNQ9UJH8 293 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 SPRY3O43610 288 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 SYNGR3O43761 229 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 PRKRAO75569 313 aaKnown RBP5.63□□□□□ -1.51
SMAD4-212ENST00000591126 CCL3P10147 92 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 CPN1P15169 458 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 NPY4RP50391 375 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 SNRPGP62308 76 aaKnown RBP5.63□□□□□ -1.51
SMAD4-212ENST00000591126 RPL23AP62750 156 aaKnown RBP5.63□□□□□ -1.51
SMAD4-212ENST00000591126 ALKBH1Q13686 389 aaKnown RBP5.63□□□□□ -1.51
SMAD4-212ENST00000591126 ZNF74Q16587 644 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 KCTD21Q4G0X4 260 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 MRPL14Q6P1L8 145 aaKnown RBP5.63□□□□□ -1.51
SMAD4-212ENST00000591126 ZNF679Q8IYX0 411 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 FAM58AQ8N1B3 248 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 TMEM99Q8N816 258 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 OR4A16Q8NH70 328 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 OPALINQ96PE5 141 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 SIGLEC12Q96PQ1 595 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 SLC39A9Q9NUM3 307 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 PTTG3PQ9NZH4 202 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 SEMA5BQ9P283 1151 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 KLF2Q9Y5W3 355 aaPredicted RBP5.63□□□□□ -1.51
SMAD4-212ENST00000591126 V9GY05 133 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms