RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 C19orf48Q6RUI8 117 aa15.45■□□□□ 0.06
SMARCA4-215ENST00000590574 FIP1L1Q6UN15 594 aaKnown RBP15.45■□□□□ 0.06
SMARCA4-215ENST00000590574 GAREM1Q9H706 876 aa15.45■□□□□ 0.06
SMARCA4-215ENST00000590574 PIGLQ9Y2B2 252 aa15.45■□□□□ 0.06
SMARCA4-215ENST00000590574 A0A1W2PNR3 127 aa15.45■□□□□ 0.06
SMARCA4-215ENST00000590574 CPT2P23786 658 aa15.45■□□□□ 0.06
SMARCA4-215ENST00000590574 AFF3P51826 1226 aaKnown RBP15.45■□□□□ 0.06
SMARCA4-215ENST00000590574 GRB2P62993 217 aaKnown RBP15.45■□□□□ 0.06
SMARCA4-215ENST00000590574 LGALSLQ3ZCW2 172 aaPredicted RBP15.45■□□□□ 0.06
SMARCA4-215ENST00000590574 ANKRD36A6QL64 1941 aa15.45■□□□□ 0.06
SMARCA4-215ENST00000590574 CNOT4O95628 575 aaKnown RBP15.45■□□□□ 0.06
SMARCA4-215ENST00000590574 ADRA2AP08913 450 aa15.45■□□□□ 0.06
SMARCA4-215ENST00000590574 ALOX5APP20292 161 aa15.45■□□□□ 0.06
SMARCA4-215ENST00000590574 DPP4P27487 766 aa15.45■□□□□ 0.06
SMARCA4-215ENST00000590574 PPT1P50897 306 aa15.45■□□□□ 0.06
SMARCA4-215ENST00000590574 ATP1B3P54709 279 aa15.45■□□□□ 0.06
SMARCA4-215ENST00000590574 FZD2Q14332 565 aa15.45■□□□□ 0.06
SMARCA4-215ENST00000590574 ZCCHC4Q9H5U6 513 aa15.45■□□□□ 0.06
SMARCA4-215ENST00000590574 ZP3P21754 424 aa15.44■□□□□ 0.06
SMARCA4-215ENST00000590574 LAP3P28838 519 aa15.44■□□□□ 0.06
SMARCA4-215ENST00000590574 HTR5AP47898 357 aa15.44■□□□□ 0.06
SMARCA4-215ENST00000590574 LYSMD4Q5XG99 296 aa15.44■□□□□ 0.06
SMARCA4-215ENST00000590574 DOK3Q7L591 496 aa15.44■□□□□ 0.06
SMARCA4-215ENST00000590574 STT3BQ8TCJ2 826 aa15.44■□□□□ 0.06
SMARCA4-215ENST00000590574 MARCH1Q8TCQ1 289 aa15.44■□□□□ 0.06
SMARCA4-215ENST00000590574 UBL7Q96S82 380 aaPredicted RBP15.44■□□□□ 0.06
SMARCA4-215ENST00000590574 ZNF649Q9BS31 505 aa15.44■□□□□ 0.06
SMARCA4-215ENST00000590574 RFPL4AA6NLU0 287 aa15.44■□□□□ 0.06
SMARCA4-215ENST00000590574 RFPL4AL1F8VTS6 287 aa15.44■□□□□ 0.06
SMARCA4-215ENST00000590574 POU2F2P09086 479 aa15.44■□□□□ 0.06
SMARCA4-215ENST00000590574 PI3P19957 117 aa15.44■□□□□ 0.06
SMARCA4-215ENST00000590574 EFNA3P52797 238 aa15.44■□□□□ 0.06
SMARCA4-215ENST00000590574 PRSS42Q7Z5A4 293 aa15.44■□□□□ 0.06
SMARCA4-215ENST00000590574 GRAMD2AQ8IUY3 354 aa15.44■□□□□ 0.06
SMARCA4-215ENST00000590574 SPIN2AQ99865 258 aa15.44■□□□□ 0.06
SMARCA4-215ENST00000590574 SPIN2BQ9BPZ2 258 aa15.44■□□□□ 0.06
SMARCA4-215ENST00000590574 GPR84Q9NQS5 396 aa15.44■□□□□ 0.06
SMARCA4-215ENST00000590574 BPNT1O95861 308 aa15.44■□□□□ 0.06
SMARCA4-215ENST00000590574 QDPRP09417 244 aa15.44■□□□□ 0.06
SMARCA4-215ENST00000590574 PSMB6P28072 239 aa15.44■□□□□ 0.06
SMARCA4-215ENST00000590574 CD226Q15762 336 aa15.44■□□□□ 0.06
SMARCA4-215ENST00000590574 Q6ZS52 159 aa15.44■□□□□ 0.06
SMARCA4-215ENST00000590574 FAM181AQ8N9Y4 354 aa15.44■□□□□ 0.06
SMARCA4-215ENST00000590574 ST8SIA1Q92185 356 aa15.44■□□□□ 0.06
SMARCA4-215ENST00000590574 SLAMF9Q96A28 289 aa15.44■□□□□ 0.06
SMARCA4-215ENST00000590574 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.44■□□□□ 0.06
SMARCA4-215ENST00000590574 F5P12259 2224 aa15.44■□□□□ 0.06
SMARCA4-215ENST00000590574 STMND1H3BQB6 276 aa15.44■□□□□ 0.06
SMARCA4-215ENST00000590574 SLC33A1O00400 549 aaPredicted RBP15.44■□□□□ 0.06
SMARCA4-215ENST00000590574 MSX1P28360 303 aa15.44■□□□□ 0.06
SMARCA4-215ENST00000590574 SFRP5Q5T4F7 317 aa15.44■□□□□ 0.06
SMARCA4-215ENST00000590574 ZNF529Q6P280 563 aa15.44■□□□□ 0.06
SMARCA4-215ENST00000590574 ZPLD1Q8TCW7 415 aa15.44■□□□□ 0.06
SMARCA4-215ENST00000590574 RNF128Q8TEB7 428 aa15.44■□□□□ 0.06
SMARCA4-215ENST00000590574 MVB12AQ96EY5 273 aa15.44■□□□□ 0.06
SMARCA4-215ENST00000590574 DNTTIP1Q9H147 329 aa15.44■□□□□ 0.06
SMARCA4-215ENST00000590574 ZNF286AQ9HBT8 521 aa15.44■□□□□ 0.06
SMARCA4-215ENST00000590574 LUZP4Q9P127 313 aa15.44■□□□□ 0.06
SMARCA4-215ENST00000590574 SCN3AQ9NY46 2000 aa15.43■□□□□ 0.06
SMARCA4-215ENST00000590574 CACNA1CQ13936 2221 aa15.43■□□□□ 0.06
SMARCA4-215ENST00000590574 LOC102725191A0A1B0GVB3 256 aa15.43■□□□□ 0.06
SMARCA4-215ENST00000590574 IFNA2P01563 188 aa15.43■□□□□ 0.06
SMARCA4-215ENST00000590574 TUBG1P23258 451 aa15.43■□□□□ 0.06
SMARCA4-215ENST00000590574 CXCL12P48061 93 aa15.43■□□□□ 0.06
SMARCA4-215ENST00000590574 HYAL1Q12794 435 aa15.43■□□□□ 0.06
SMARCA4-215ENST00000590574 NKAIN1Q4KMZ8 207 aa15.43■□□□□ 0.06
SMARCA4-215ENST00000590574 MRPL21Q7Z2W9 205 aaKnown RBP15.43■□□□□ 0.06
SMARCA4-215ENST00000590574 CMTM1Q8IZ96 169 aa15.43■□□□□ 0.06
SMARCA4-215ENST00000590574 NINJ1Q92982 152 aa15.43■□□□□ 0.06
SMARCA4-215ENST00000590574 SLC22A11Q9NSA0 550 aa15.43■□□□□ 0.06
SMARCA4-215ENST00000590574 ZNF223Q9UK11 482 aaPredicted RBP15.43■□□□□ 0.06
SMARCA4-215ENST00000590574 THEM4Q5T1C6 240 aa15.43■□□□□ 0.06
SMARCA4-215ENST00000590574 FAM109BQ6ICB4 259 aaPredicted RBP15.43■□□□□ 0.06
SMARCA4-215ENST00000590574 OR52W1Q6IF63 320 aa15.43■□□□□ 0.06
SMARCA4-215ENST00000590574 TMED6Q8WW62 240 aa15.43■□□□□ 0.06
SMARCA4-215ENST00000590574 CCDC88CQ9P219 2028 aa15.43■□□□□ 0.06
SMARCA4-215ENST00000590574 CCDC163A0A0D9SF12 145 aa15.43■□□□□ 0.06
SMARCA4-215ENST00000590574 SEMA7AO75326 666 aa15.43■□□□□ 0.06
SMARCA4-215ENST00000590574 POU3F2P20265 443 aaPredicted RBP15.43■□□□□ 0.06
SMARCA4-215ENST00000590574 EIF1P41567 113 aaKnown RBP15.43■□□□□ 0.06
SMARCA4-215ENST00000590574 MESTQ5EB52 335 aa15.43■□□□□ 0.06
SMARCA4-215ENST00000590574 UNKLQ9H9P5 680 aaKnown RBP15.43■□□□□ 0.06
SMARCA4-215ENST00000590574 HRH3Q9Y5N1 445 aa15.43■□□□□ 0.06
SMARCA4-215ENST00000590574 CKAP5Q14008 2032 aa15.43■□□□□ 0.06
SMARCA4-215ENST00000590574 MYOFQ9NZM1 2061 aa15.43■□□□□ 0.06
SMARCA4-215ENST00000590574 IGHV5-51A0A0C4DH38 117 aa15.43■□□□□ 0.06
SMARCA4-215ENST00000590574 SDCBPO00560 298 aaPredicted RBP15.43■□□□□ 0.06
SMARCA4-215ENST00000590574 ABCD3P28288 659 aa15.43■□□□□ 0.06
SMARCA4-215ENST00000590574 ACAA2P42765 397 aaKnown RBP15.43■□□□□ 0.06
SMARCA4-215ENST00000590574 FMODQ06828 376 aa15.43■□□□□ 0.06
SMARCA4-215ENST00000590574 CFHR5Q9BXR6 569 aa15.43■□□□□ 0.06
SMARCA4-215ENST00000590574 DTX4Q9Y2E6 619 aa15.43■□□□□ 0.06
SMARCA4-215ENST00000590574 NSG1A0A0A6YYJ2 146 aa15.42■□□□□ 0.06
SMARCA4-215ENST00000590574 KIR2DL1P43626 348 aaPredicted RBP15.42■□□□□ 0.06
SMARCA4-215ENST00000590574 UBE2IP63279 158 aaKnown RBP15.42■□□□□ 0.06
SMARCA4-215ENST00000590574 DGAT2L6Q6ZPD8 337 aa15.42■□□□□ 0.06
SMARCA4-215ENST00000590574 EXD3Q8N9H8 876 aa15.42■□□□□ 0.06
SMARCA4-215ENST00000590574 ASB13Q8WXK3 278 aa15.42■□□□□ 0.06
SMARCA4-215ENST00000590574 SLC17A5Q9NRA2 495 aa15.42■□□□□ 0.06
SMARCA4-215ENST00000590574 PCDHGA9Q9Y5G4 932 aaKnown RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms