RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 NPY4RP50391 375 aa13.67□□□□□ -0.22
CIRBP-228ENST00000590347 GLYATL3Q5SZD4 288 aa13.67□□□□□ -0.22
CIRBP-228ENST00000590347 AKR1C8PQ5T2L2 129 aa13.67□□□□□ -0.22
CIRBP-228ENST00000590347 C22orf39Q6P5X5 142 aa13.67□□□□□ -0.22
CIRBP-228ENST00000590347 BTNL8Q6UX41 500 aa13.67□□□□□ -0.22
CIRBP-228ENST00000590347 DRAM2Q6UX65 266 aa13.67□□□□□ -0.22
CIRBP-228ENST00000590347 ZAR1Q86SH2 424 aa13.67□□□□□ -0.22
CIRBP-228ENST00000590347 TMEFF1Q8IYR6 380 aa13.67□□□□□ -0.22
CIRBP-228ENST00000590347 LRRC18Q8N456 261 aa13.67□□□□□ -0.22
CIRBP-228ENST00000590347 CCDC74AQ96AQ1 378 aa13.67□□□□□ -0.22
CIRBP-228ENST00000590347 SMIM8Q96KF7 97 aa13.67□□□□□ -0.22
CIRBP-228ENST00000590347 WFIKKN1Q96NZ8 548 aa13.67□□□□□ -0.22
CIRBP-228ENST00000590347 SLC46A2Q9BY10 475 aa13.67□□□□□ -0.22
CIRBP-228ENST00000590347 METTL8Q9H825 291 aaKnown RBP13.67□□□□□ -0.22
CIRBP-228ENST00000590347 CBLN4Q9NTU7 201 aa13.67□□□□□ -0.22
CIRBP-228ENST00000590347 GRXCR1A8MXD5 290 aa13.66□□□□□ -0.22
CIRBP-228ENST00000590347 GMFGO60234 142 aa13.66□□□□□ -0.22
CIRBP-228ENST00000590347 NKX6-1P78426 367 aaPredicted RBP13.66□□□□□ -0.22
CIRBP-228ENST00000590347 PLAURQ03405 335 aa13.66□□□□□ -0.22
CIRBP-228ENST00000590347 SPOCK1Q08629 439 aa13.66□□□□□ -0.22
CIRBP-228ENST00000590347 GALNTL5Q7Z4T8 443 aa13.66□□□□□ -0.22
CIRBP-228ENST00000590347 C5orf24Q7Z6I8 188 aa13.66□□□□□ -0.22
CIRBP-228ENST00000590347 RANBP3LQ86VV4 465 aaPredicted RBP13.66□□□□□ -0.22
CIRBP-228ENST00000590347 CACUL1Q86Y37 369 aa13.66□□□□□ -0.22
CIRBP-228ENST00000590347 TMEM25Q86YD3 366 aa13.66□□□□□ -0.22
CIRBP-228ENST00000590347 ZNF584Q8IVC4 421 aa13.66□□□□□ -0.22
CIRBP-228ENST00000590347 ZNF664Q8N3J9 261 aa13.66□□□□□ -0.22
CIRBP-228ENST00000590347 ZNF610Q8N9Z0 462 aa13.66□□□□□ -0.22
CIRBP-228ENST00000590347 PNLDC1Q8NA58 520 aaKnown RBP13.66□□□□□ -0.22
CIRBP-228ENST00000590347 OR51A2Q8NGJ7 313 aa13.66□□□□□ -0.22
CIRBP-228ENST00000590347 Q8WTZ3 238 aa13.66□□□□□ -0.22
CIRBP-228ENST00000590347 OR10C1Q96KK4 312 aa13.66□□□□□ -0.22
CIRBP-228ENST00000590347 TAAR9Q96RI9 348 aa13.66□□□□□ -0.22
CIRBP-228ENST00000590347 AIF1LQ9BQI0 150 aa13.66□□□□□ -0.22
CIRBP-228ENST00000590347 MRM2Q9UI43 246 aaKnown RBP13.66□□□□□ -0.22
CIRBP-228ENST00000590347 WIF1Q9Y5W5 379 aa13.66□□□□□ -0.22
CIRBP-228ENST00000590347 CHD3Q12873 2000 aaKnown RBP13.66□□□□□ -0.22
CIRBP-228ENST00000590347 PRH1P02810 166 aa13.66□□□□□ -0.22
CIRBP-228ENST00000590347 SPARCP09486 303 aa13.66□□□□□ -0.22
CIRBP-228ENST00000590347 FRKP42685 505 aaPredicted RBP13.66□□□□□ -0.22
CIRBP-228ENST00000590347 HEPN1Q6WQI6 88 aa13.66□□□□□ -0.22
CIRBP-228ENST00000590347 MFSD8Q8NHS3 518 aa13.66□□□□□ -0.22
CIRBP-228ENST00000590347 PACRGQ96M98 296 aaPredicted RBP13.66□□□□□ -0.22
CIRBP-228ENST00000590347 WDR92Q96MX6 357 aa13.66□□□□□ -0.22
CIRBP-228ENST00000590347 ASB16Q96NS5 453 aa13.66□□□□□ -0.22
CIRBP-228ENST00000590347 OPN3Q9H1Y3 402 aaPredicted RBP13.66□□□□□ -0.22
CIRBP-228ENST00000590347 A0A087WZY1 265 aa13.66□□□□□ -0.22
CIRBP-228ENST00000590347 OR5H15A6NDH6 313 aa13.66□□□□□ -0.22
CIRBP-228ENST00000590347 OR5H1A6NKK0 313 aa13.66□□□□□ -0.22
CIRBP-228ENST00000590347 SCGB1D2O95969 90 aa13.66□□□□□ -0.22
CIRBP-228ENST00000590347 PCCBP05166 539 aa13.66□□□□□ -0.22
CIRBP-228ENST00000590347 ACTBP60709 375 aa13.66□□□□□ -0.22
CIRBP-228ENST00000590347 ACTG1P63261 375 aa13.66□□□□□ -0.22
CIRBP-228ENST00000590347 ACY1Q03154 408 aa13.66□□□□□ -0.22
CIRBP-228ENST00000590347 RAB11BQ15907 218 aa13.66□□□□□ -0.22
CIRBP-228ENST00000590347 TPGS2Q68CL5 300 aa13.66□□□□□ -0.22
CIRBP-228ENST00000590347 LEG1Q6P5S2 330 aa13.66□□□□□ -0.22
CIRBP-228ENST00000590347 HIST3H2BBQ8N257 126 aa13.66□□□□□ -0.22
CIRBP-228ENST00000590347 SYS1Q8N2H4 156 aa13.66□□□□□ -0.22
CIRBP-228ENST00000590347 SCARF2Q96GP6 870 aaPredicted RBP13.66□□□□□ -0.22
CIRBP-228ENST00000590347 AMELYQ99218 206 aa13.66□□□□□ -0.22
CIRBP-228ENST00000590347 SLC25A21Q9BQT8 299 aaPredicted RBP13.66□□□□□ -0.22
CIRBP-228ENST00000590347 OR14J1Q9UGF5 321 aa13.66□□□□□ -0.22
CIRBP-228ENST00000590347 ZNF587BE7ETH6 402 aa13.65□□□□□ -0.22
CIRBP-228ENST00000590347 SRPX2O60687 465 aaPredicted RBP13.65□□□□□ -0.22
CIRBP-228ENST00000590347 DHPSP49366 369 aaPredicted RBP13.65□□□□□ -0.22
CIRBP-228ENST00000590347 DPY19L4Q7Z388 723 aa13.65□□□□□ -0.22
CIRBP-228ENST00000590347 OR6N2Q8NGY6 317 aa13.65□□□□□ -0.22
CIRBP-228ENST00000590347 ZNF775Q96BV0 537 aaPredicted RBP13.65□□□□□ -0.22
CIRBP-228ENST00000590347 KCNJ16Q9NPI9 418 aa13.65□□□□□ -0.22
CIRBP-228ENST00000590347 SLC2A8Q9NY64 477 aa13.65□□□□□ -0.22
CIRBP-228ENST00000590347 ETV7Q9Y603 341 aa13.65□□□□□ -0.22
CIRBP-228ENST00000590347 COL4A3Q01955 1670 aa13.65□□□□□ -0.22
CIRBP-228ENST00000590347 GPRIN2O60269 458 aa13.65□□□□□ -0.22
CIRBP-228ENST00000590347 CDC40O60508 579 aaKnown RBP eCLIP13.65□□□□□ -0.22
CIRBP-228ENST00000590347 EFEMP2O95967 443 aa13.65□□□□□ -0.22
CIRBP-228ENST00000590347 SERPINA2P20848 420 aa13.65□□□□□ -0.22
CIRBP-228ENST00000590347 PRLHRP49683 370 aa13.65□□□□□ -0.22
CIRBP-228ENST00000590347 ERVFRD-1P60508 538 aa13.65□□□□□ -0.22
CIRBP-228ENST00000590347 NKAIN1Q4KMZ8 207 aa13.65□□□□□ -0.22
CIRBP-228ENST00000590347 TCEAL6Q6IPX3 200 aa13.65□□□□□ -0.22
CIRBP-228ENST00000590347 FAM220AQ7Z4H9 259 aa13.65□□□□□ -0.22
CIRBP-228ENST00000590347 ZNF679Q8IYX0 411 aa13.65□□□□□ -0.22
CIRBP-228ENST00000590347 OR2I1PQ8NGU4 316 aa13.65□□□□□ -0.22
CIRBP-228ENST00000590347 NPRL2Q8WTW4 380 aa13.65□□□□□ -0.22
CIRBP-228ENST00000590347 UBE2E3Q969T4 207 aa13.65□□□□□ -0.22
CIRBP-228ENST00000590347 ZNF689Q96CS4 500 aaPredicted RBP13.65□□□□□ -0.22
CIRBP-228ENST00000590347 LRFN5Q96NI6 719 aa13.65□□□□□ -0.22
CIRBP-228ENST00000590347 HDGFL3Q9Y3E1 203 aa13.65□□□□□ -0.22
CIRBP-228ENST00000590347 SLCO1B1Q9Y6L6 691 aa13.65□□□□□ -0.22
CIRBP-228ENST00000590347 SPTBN5Q9NRC6 3674 aaKnown RBP13.64□□□□□ -0.23
CIRBP-228ENST00000590347 PRKNO60260 465 aaPredicted RBP13.64□□□□□ -0.23
CIRBP-228ENST00000590347 DNAJB6O75190 326 aa13.64□□□□□ -0.23
CIRBP-228ENST00000590347 CSNK2A2P19784 350 aaPredicted RBP13.64□□□□□ -0.23
CIRBP-228ENST00000590347 PAX6P26367 422 aa13.64□□□□□ -0.23
CIRBP-228ENST00000590347 CD200P41217 278 aa13.64□□□□□ -0.23
CIRBP-228ENST00000590347 PPICP45877 212 aa13.64□□□□□ -0.23
CIRBP-228ENST00000590347 AFF3P51826 1226 aaKnown RBP13.64□□□□□ -0.23
CIRBP-228ENST00000590347 BIKQ13323 160 aa13.64□□□□□ -0.23
CIRBP-228ENST00000590347 TRMT12Q53H54 448 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms