RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 DIMT1Q9UNQ2 313 aaKnown RBP6.68□□□□□ -1.34
SMAD4-209ENST00000589941 ANGPT4Q9Y264 503 aa6.68□□□□□ -1.34
SMAD4-209ENST00000589941 GPR52Q9Y2T5 361 aa6.68□□□□□ -1.34
SMAD4-209ENST00000589941 CAB39Q9Y376 341 aaPredicted RBP6.68□□□□□ -1.34
SMAD4-209ENST00000589941 PPIAL4AQ9Y536 164 aa6.68□□□□□ -1.34
SMAD4-209ENST00000589941 PLXNB1O43157 2135 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 LOC105371242A0A075B767 164 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 LOC100506127A0A0U1RQW1 187 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 LOC102723971A0A1B0GUV8 181 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 LRIT2A6NDA9 550 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 RAB27BO00194 218 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 NDUFS8O00217 210 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 FAAHO00519 579 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 FFAR1O14842 300 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 ZIC3O60481 467 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 SS18L1O75177 396 aaPredicted RBP6.67□□□□□ -1.34
SMAD4-209ENST00000589941 GADD45GO95257 159 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 IL7P13232 177 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 NDUFB7P17568 137 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 ABCD3P28288 659 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 SRD5A2P31213 254 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 IDH2P48735 452 aaKnown RBP6.67□□□□□ -1.34
SMAD4-209ENST00000589941 RORCP51449 518 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 DVL1P1P54792 670 aaPredicted RBP6.67□□□□□ -1.34
SMAD4-209ENST00000589941 ELLP55199 621 aaPredicted RBP6.67□□□□□ -1.34
SMAD4-209ENST00000589941 SERTAD2Q14140 314 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 FGFBP1Q14512 234 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 LARS2Q15031 903 aaKnown RBP6.67□□□□□ -1.34
SMAD4-209ENST00000589941 SEC23BQ15437 767 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 SPHARQ15513 63 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 DUSP7Q16829 419 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 ZNF628Q5EBL2 1059 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 CCNJQ5T5M9 372 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 SAXO2Q658L1 398 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 OR5M10Q6IEU7 315 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 MED27Q6P2C8 311 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 CD200R1LQ6Q8B3 271 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 METAP1DQ6UB28 335 aaPredicted RBP6.67□□□□□ -1.34
SMAD4-209ENST00000589941 TMPRSS11AQ6ZMR5 421 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 NRARPQ7Z6K4 114 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 TAGAPQ8N103 731 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 RNF175Q8N4F7 328 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 LINC00471Q8N535 108 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 AQP11Q8NBQ7 271 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 STEAP2Q8NFT2 490 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 OR8J1Q8NGP2 316 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 HUS1BQ8NHY5 278 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 NFKBIDQ8NI38 313 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 CAPSLQ8WWF8 208 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 MAL2Q969L2 176 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 SLC25A46Q96AG3 418 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 NEURL3Q96EH8 262 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 TMEM80Q96HE8 168 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 DHRS9Q9BPW9 319 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 SLC35A5Q9BS91 424 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 EFCAB11Q9BUY7 163 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 MND1Q9BWT6 205 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 MIXL1Q9H2W2 232 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 NIPAL2Q9H841 368 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 LPAR2Q9HBW0 351 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 FGF20Q9NP95 211 aaPredicted RBP6.67□□□□□ -1.34
SMAD4-209ENST00000589941 DUSP22Q9NRW4 184 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 ACSS1Q9NUB1 689 aaPredicted RBP6.67□□□□□ -1.34
SMAD4-209ENST00000589941 KLRF1Q9NZS2 232 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 KLHL21Q9UJP4 597 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 DKKL1Q9UK85 242 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 RPL36Q9Y3U8 105 aaKnown RBP6.67□□□□□ -1.34
SMAD4-209ENST00000589941 CMAHPQ9Y471 501 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 ZNF175Q9Y473 711 aa6.67□□□□□ -1.34
SMAD4-209ENST00000589941 C2orf92A0A1B0GVN3 265 aa6.66□□□□□ -1.34
SMAD4-209ENST00000589941 A0A1W2PQ09 198 aa6.66□□□□□ -1.34
SMAD4-209ENST00000589941 TMEM129A0AVI4 362 aa6.66□□□□□ -1.34
SMAD4-209ENST00000589941 MEIOCA2RUB1 952 aa6.66□□□□□ -1.34
SMAD4-209ENST00000589941 URADA6NGE7 173 aa6.66□□□□□ -1.34
SMAD4-209ENST00000589941 WASHC1A8K0Z3 465 aa6.66□□□□□ -1.34
SMAD4-209ENST00000589941 RTCAO00442 366 aaKnown RBP6.66□□□□□ -1.34
SMAD4-209ENST00000589941 ENTPD6O75354 484 aa6.66□□□□□ -1.34
SMAD4-209ENST00000589941 C6orf47O95873 294 aa6.66□□□□□ -1.34
SMAD4-209ENST00000589941 MT-ND5P03915 603 aa6.66□□□□□ -1.34
SMAD4-209ENST00000589941 IFNW1P05000 195 aa6.66□□□□□ -1.34
SMAD4-209ENST00000589941 BTF3P20290 206 aaKnown RBP6.66□□□□□ -1.34
SMAD4-209ENST00000589941 TNFRSF1BP20333 461 aa6.66□□□□□ -1.34
SMAD4-209ENST00000589941 MDKP21741 143 aaPredicted RBP6.66□□□□□ -1.34
SMAD4-209ENST00000589941 UQCRC2P22695 453 aa6.66□□□□□ -1.34
SMAD4-209ENST00000589941 AGTR1P30556 359 aa6.66□□□□□ -1.34
SMAD4-209ENST00000589941 FGF9P31371 208 aaPredicted RBP6.66□□□□□ -1.34
SMAD4-209ENST00000589941 GSTM5P46439 218 aa6.66□□□□□ -1.34
SMAD4-209ENST00000589941 NKX2-5P52952 324 aaPredicted RBP6.66□□□□□ -1.34
SMAD4-209ENST00000589941 SMIM11AP58511 58 aa6.66□□□□□ -1.34
SMAD4-209ENST00000589941 RPS13P62277 151 aaKnown RBP6.66□□□□□ -1.34
SMAD4-209ENST00000589941 ZNF91Q05481 1191 aa6.66□□□□□ -1.34
SMAD4-209ENST00000589941 SCN1BQ07699 218 aa6.66□□□□□ -1.34
SMAD4-209ENST00000589941 COX10Q12887 443 aa6.66□□□□□ -1.34
SMAD4-209ENST00000589941 TPBGQ13641 420 aa6.66□□□□□ -1.34
SMAD4-209ENST00000589941 ZFP69Q49AA0 526 aa6.66□□□□□ -1.34
SMAD4-209ENST00000589941 VAX1Q5SQQ9 334 aa6.66□□□□□ -1.34
SMAD4-209ENST00000589941 REEP3Q6NUK4 255 aa6.66□□□□□ -1.34
SMAD4-209ENST00000589941 PTCHD4Q6ZW05 846 aa6.66□□□□□ -1.34
SMAD4-209ENST00000589941 CHMP1BQ7LBR1 199 aa6.66□□□□□ -1.34
SMAD4-209ENST00000589941 COMMD6Q7Z4G1 85 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms