RNA–Protein interactions for RNA: ENST00000589733.1

MBD1-219, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 2

Gene MBD1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-219ENST00000589733 CLPTM1O96005 669 aa13.09□□□□□ -0.31
MBD1-219ENST00000589733 IGHV3-13P01766 116 aa13.09□□□□□ -0.31
MBD1-219ENST00000589733 CLUP10909 449 aa13.09□□□□□ -0.31
MBD1-219ENST00000589733 SLC25A16P16260 332 aa13.09□□□□□ -0.31
MBD1-219ENST00000589733 DBPQ10586 325 aaPredicted RBP13.09□□□□□ -0.31
MBD1-219ENST00000589733 MAD2L1BPQ15013 274 aaPredicted RBP13.09□□□□□ -0.31
MBD1-219ENST00000589733 SNAPC1Q16533 368 aa13.09□□□□□ -0.31
MBD1-219ENST00000589733 CARTPTQ16568 116 aa13.09□□□□□ -0.31
MBD1-219ENST00000589733 KDM4DQ6B0I6 523 aa13.09□□□□□ -0.31
MBD1-219ENST00000589733 PLBD1Q6P4A8 553 aa13.09□□□□□ -0.31
MBD1-219ENST00000589733 OR5L1Q8NGL2 311 aa13.09□□□□□ -0.31
MBD1-219ENST00000589733 KLF14Q8TD94 323 aaPredicted RBP13.09□□□□□ -0.31
MBD1-219ENST00000589733 SLC7A6Q92536 515 aa13.09□□□□□ -0.31
MBD1-219ENST00000589733 SPTSSAQ969W0 71 aa13.09□□□□□ -0.31
MBD1-219ENST00000589733 APOBEC3DQ96AK3 386 aaPredicted RBP13.09□□□□□ -0.31
MBD1-219ENST00000589733 INTS14Q96SY0 518 aa13.09□□□□□ -0.31
MBD1-219ENST00000589733 PIMREGQ9BSJ6 248 aa13.09□□□□□ -0.31
MBD1-219ENST00000589733 CYSLTR2Q9NS75 346 aa13.09□□□□□ -0.31
MBD1-219ENST00000589733 FLNAP21333 2647 aaKnown RBP13.09□□□□□ -0.31
MBD1-219ENST00000589733 CR1P17927 2039 aa13.08□□□□□ -0.31
MBD1-219ENST00000589733 RTTNQ86VV8 2226 aa13.08□□□□□ -0.32
MBD1-219ENST00000589733 HIVEP1P15822 2718 aa13.08□□□□□ -0.32
MBD1-219ENST00000589733 LOC390937A0A1W2PQ73 354 aa13.08□□□□□ -0.32
MBD1-219ENST00000589733 RNF223E7ERA6 249 aa13.08□□□□□ -0.32
MBD1-219ENST00000589733 LY6HO94772 140 aa13.08□□□□□ -0.32
MBD1-219ENST00000589733 NGFP01138 241 aa13.08□□□□□ -0.32
MBD1-219ENST00000589733 GSTT1P30711 240 aa13.08□□□□□ -0.32
MBD1-219ENST00000589733 LIPAP38571 399 aa13.08□□□□□ -0.32
MBD1-219ENST00000589733 PTGES3Q15185 160 aaKnown RBP13.08□□□□□ -0.32
MBD1-219ENST00000589733 PCGF3Q3KNV8 242 aa13.08□□□□□ -0.32
MBD1-219ENST00000589733 TEX30Q5JUR7 227 aa13.08□□□□□ -0.32
MBD1-219ENST00000589733 SLC35D3Q5M8T2 416 aa13.08□□□□□ -0.32
MBD1-219ENST00000589733 TMEM236Q5W0B7 351 aa13.08□□□□□ -0.32
MBD1-219ENST00000589733 LYPD4Q6UWN0 246 aa13.08□□□□□ -0.32
MBD1-219ENST00000589733 DCXRQ7Z4W1 244 aa13.08□□□□□ -0.32
MBD1-219ENST00000589733 ERI1Q8IV48 349 aaKnown RBP13.08□□□□□ -0.32
MBD1-219ENST00000589733 ZNF511Q8NB15 262 aa13.08□□□□□ -0.32
MBD1-219ENST00000589733 OR6N2Q8NGY6 317 aa13.08□□□□□ -0.32
MBD1-219ENST00000589733 ZNRF4Q8WWF5 429 aa13.08□□□□□ -0.32
MBD1-219ENST00000589733 STMN2Q93045 179 aa13.08□□□□□ -0.32
MBD1-219ENST00000589733 RBM4BQ9BQ04 359 aaKnown RBP13.08□□□□□ -0.32
MBD1-219ENST00000589733 HCAR1Q9BXC0 346 aa13.08□□□□□ -0.32
MBD1-219ENST00000589733 REG4Q9BYZ8 158 aa13.08□□□□□ -0.32
MBD1-219ENST00000589733 OR51V1Q9H2C8 321 aa13.08□□□□□ -0.32
MBD1-219ENST00000589733 MED20Q9H944 212 aa13.08□□□□□ -0.32
MBD1-219ENST00000589733 WDR76Q9H967 626 aa13.08□□□□□ -0.32
MBD1-219ENST00000589733 HINT3Q9NQE9 182 aaKnown RBP13.08□□□□□ -0.32
MBD1-219ENST00000589733 TVP23BQ9NYZ1 205 aa13.08□□□□□ -0.32
MBD1-219ENST00000589733 ORC6Q9Y5N6 252 aa13.08□□□□□ -0.32
MBD1-219ENST00000589733 VPS13CQ709C8 3753 aa13.07□□□□□ -0.32
MBD1-219ENST00000589733 IGHV4-30-2A0A087WSY4 118 aa13.07□□□□□ -0.32
MBD1-219ENST00000589733 SAC3D1A6NKF1 404 aa13.07□□□□□ -0.32
MBD1-219ENST00000589733 C17orf100A8MU93 164 aa13.07□□□□□ -0.32
MBD1-219ENST00000589733 ZNF878C9JN71 531 aa13.07□□□□□ -0.32
MBD1-219ENST00000589733 TIMM8AO60220 97 aaPredicted RBP13.07□□□□□ -0.32
MBD1-219ENST00000589733 DBHP09172 617 aa13.07□□□□□ -0.32
MBD1-219ENST00000589733 NAT2P11245 290 aa13.07□□□□□ -0.32
MBD1-219ENST00000589733 DAOP14920 347 aa13.07□□□□□ -0.32
MBD1-219ENST00000589733 MPV17P39210 176 aa13.07□□□□□ -0.32
MBD1-219ENST00000589733 RPS27P42677 84 aaKnown RBP13.07□□□□□ -0.32
MBD1-219ENST00000589733 TPTEP56180 551 aa13.07□□□□□ -0.32
MBD1-219ENST00000589733 RPS7P62081 194 aaKnown RBP13.07□□□□□ -0.32
MBD1-219ENST00000589733 TAF13Q15543 124 aa13.07□□□□□ -0.32
MBD1-219ENST00000589733 PCK2Q16822 640 aa13.07□□□□□ -0.32
MBD1-219ENST00000589733 ALKBH6Q3KRA9 238 aa13.07□□□□□ -0.32
MBD1-219ENST00000589733 KLHL12Q53G59 568 aa13.07□□□□□ -0.32
MBD1-219ENST00000589733 LINC01590Q5TEZ4 76 aa13.07□□□□□ -0.32
MBD1-219ENST00000589733 LCN1P1Q5VSP4 162 aa13.07□□□□□ -0.32
MBD1-219ENST00000589733 CXXC5Q7LFL8 322 aaKnown RBP13.07□□□□□ -0.32
MBD1-219ENST00000589733 SHFQ7M4L6 423 aa13.07□□□□□ -0.32
MBD1-219ENST00000589733 CPOQ8IVL8 374 aa13.07□□□□□ -0.32
MBD1-219ENST00000589733 ZCCHC24Q8N2G6 241 aaKnown RBP13.07□□□□□ -0.32
MBD1-219ENST00000589733 CIARTQ8N365 385 aaPredicted RBP13.07□□□□□ -0.32
MBD1-219ENST00000589733 ZNF540Q8NDQ6 660 aa13.07□□□□□ -0.32
MBD1-219ENST00000589733 C10orf105Q8TEF2 133 aa13.07□□□□□ -0.32
MBD1-219ENST00000589733 UBASH3BQ8TF42 649 aa13.07□□□□□ -0.32
MBD1-219ENST00000589733 CIB1Q99828 191 aa13.07□□□□□ -0.32
MBD1-219ENST00000589733 COPS4Q9BT78 406 aa13.07□□□□□ -0.32
MBD1-219ENST00000589733 DDX28Q9NUL7 540 aaKnown RBP13.07□□□□□ -0.32
MBD1-219ENST00000589733 ZNF469Q96JG9 3925 aaPredicted RBP13.07□□□□□ -0.32
MBD1-219ENST00000589733 ZAR1LA6NP61 321 aa13.06□□□□□ -0.32
MBD1-219ENST00000589733 F5H5K5 113 aa13.06□□□□□ -0.32
MBD1-219ENST00000589733 H3BNX3 289 aa13.06□□□□□ -0.32
MBD1-219ENST00000589733 ZNF593O00488 134 aaPredicted RBP13.06□□□□□ -0.32
MBD1-219ENST00000589733 TPD52L2O43399 206 aaKnown RBP13.06□□□□□ -0.32
MBD1-219ENST00000589733 MITFO75030 526 aaPredicted RBP13.06□□□□□ -0.32
MBD1-219ENST00000589733 SLC6A9P48067 706 aa13.06□□□□□ -0.32
MBD1-219ENST00000589733 ZNF81P51508 661 aa13.06□□□□□ -0.32
MBD1-219ENST00000589733 EIF2B1Q14232 305 aaKnown RBP13.06□□□□□ -0.32
MBD1-219ENST00000589733 SLX4IPQ5VYV7 408 aa13.06□□□□□ -0.32
MBD1-219ENST00000589733 PTP4A1Q93096 173 aa13.06□□□□□ -0.32
MBD1-219ENST00000589733 SLAMF6Q96DU3 332 aa13.06□□□□□ -0.32
MBD1-219ENST00000589733 MAP6Q96JE9 813 aa13.06□□□□□ -0.32
MBD1-219ENST00000589733 PKP2Q99959 881 aa13.06□□□□□ -0.32
MBD1-219ENST00000589733 MARCH7Q9H992 704 aa13.06□□□□□ -0.32
MBD1-219ENST00000589733 PNRC2Q9NPJ4 139 aaKnown RBP13.06□□□□□ -0.32
MBD1-219ENST00000589733 NKIRAS2Q9NYR9 191 aa13.06□□□□□ -0.32
MBD1-219ENST00000589733 PTTG3PQ9NZH4 202 aa13.06□□□□□ -0.32
MBD1-219ENST00000589733 M0R135 149 aa13.05□□□□□ -0.32
MBD1-219ENST00000589733 ACSM4P0C7M7 580 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms