RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 ZNF337Q9Y3M9 751 aa6.64□□□□□ -1.35
ATG4D-210ENST00000588972 DSPPQ9NZW4 1301 aa6.64□□□□□ -1.35
ATG4D-210ENST00000588972 MPDZO75970 2070 aa6.64□□□□□ -1.35
ATG4D-210ENST00000588972 BBIP1A8MTZ0 92 aa6.63□□□□□ -1.35
ATG4D-210ENST00000588972 EVPLLA8MZ36 301 aa6.63□□□□□ -1.35
ATG4D-210ENST00000588972 C5orf58C9J3I9 102 aa6.63□□□□□ -1.35
ATG4D-210ENST00000588972 H3BNH8 94 aa6.63□□□□□ -1.35
ATG4D-210ENST00000588972 ARHGEF9O43307 516 aa6.63□□□□□ -1.35
ATG4D-210ENST00000588972 LY6G6DO95868 133 aa6.63□□□□□ -1.35
ATG4D-210ENST00000588972 ACTL6AO96019 429 aa6.63□□□□□ -1.35
ATG4D-210ENST00000588972 SLPIP03973 132 aa6.63□□□□□ -1.35
ATG4D-210ENST00000588972 LIPFP07098 398 aa6.63□□□□□ -1.35
ATG4D-210ENST00000588972 GUSBP08236 651 aa6.63□□□□□ -1.35
ATG4D-210ENST00000588972 COX4I1P13073 169 aa6.63□□□□□ -1.35
ATG4D-210ENST00000588972 ZNF708P17019 499 aa6.63□□□□□ -1.35
ATG4D-210ENST00000588972 ITGA2P17301 1181 aa6.63□□□□□ -1.35
ATG4D-210ENST00000588972 GPX2P18283 190 aa6.63□□□□□ -1.35
ATG4D-210ENST00000588972 CBLP22681 906 aa6.63□□□□□ -1.35
ATG4D-210ENST00000588972 PPIBP23284 216 aaKnown RBP6.63□□□□□ -1.35
ATG4D-210ENST00000588972 AQP1P29972 269 aa6.63□□□□□ -1.35
ATG4D-210ENST00000588972 GCKP35557 465 aa6.63□□□□□ -1.35
ATG4D-210ENST00000588972 MAGEA8P43361 318 aa6.63□□□□□ -1.35
ATG4D-210ENST00000588972 SUCLG1P53597 346 aaKnown RBP6.63□□□□□ -1.35
ATG4D-210ENST00000588972 UCP2P55851 309 aa6.63□□□□□ -1.35
ATG4D-210ENST00000588972 KCNJ10P78508 379 aa6.63□□□□□ -1.35
ATG4D-210ENST00000588972 CDK6Q00534 326 aa6.63□□□□□ -1.35
ATG4D-210ENST00000588972 KLF9Q13886 244 aaPredicted RBP6.63□□□□□ -1.35
ATG4D-210ENST00000588972 QPRTQ15274 297 aa6.63□□□□□ -1.35
ATG4D-210ENST00000588972 CYP51A1Q16850 503 aa6.63□□□□□ -1.35
ATG4D-210ENST00000588972 ACSF3Q4G176 576 aaPredicted RBP6.63□□□□□ -1.35
ATG4D-210ENST00000588972 MRPL2Q5T653 305 aaKnown RBP6.63□□□□□ -1.35
ATG4D-210ENST00000588972 AP1ARQ63HQ0 302 aa6.63□□□□□ -1.35
ATG4D-210ENST00000588972 OR7E24Q6IFN5 339 aa6.63□□□□□ -1.35
ATG4D-210ENST00000588972 NANOGP8Q6NSW7 305 aa6.63□□□□□ -1.35
ATG4D-210ENST00000588972 EIF3MQ7L2H7 374 aaKnown RBP6.63□□□□□ -1.35
ATG4D-210ENST00000588972 AQP12AQ8IXF9 295 aa6.63□□□□□ -1.35
ATG4D-210ENST00000588972 ZNF114Q8NC26 417 aa6.63□□□□□ -1.35
ATG4D-210ENST00000588972 CCDC197Q8NCU1 140 aa6.63□□□□□ -1.35
ATG4D-210ENST00000588972 OR52P1PQ8NH57 321 aa6.63□□□□□ -1.35
ATG4D-210ENST00000588972 OR5W2Q8NH69 310 aa6.63□□□□□ -1.35
ATG4D-210ENST00000588972 RNASE8Q8TDE3 154 aaKnown RBP6.63□□□□□ -1.35
ATG4D-210ENST00000588972 GPR119Q8TDV5 335 aa6.63□□□□□ -1.35
ATG4D-210ENST00000588972 CCDC107Q8WV48 283 aa6.63□□□□□ -1.35
ATG4D-210ENST00000588972 LRRC58Q96CX6 371 aa6.63□□□□□ -1.35
ATG4D-210ENST00000588972 TUBA1CQ9BQE3 449 aa6.63□□□□□ -1.35
ATG4D-210ENST00000588972 PIGQQ9BRB3 760 aa6.63□□□□□ -1.35
ATG4D-210ENST00000588972 RSPO3Q9BXY4 272 aaPredicted RBP6.63□□□□□ -1.35
ATG4D-210ENST00000588972 LAT2Q9GZY6 243 aa6.63□□□□□ -1.35
ATG4D-210ENST00000588972 KAT8Q9H7Z6 458 aaKnown RBP6.63□□□□□ -1.35
ATG4D-210ENST00000588972 PLEKHF2Q9H8W4 249 aa6.63□□□□□ -1.35
ATG4D-210ENST00000588972 MTHFD2LQ9H903 347 aaPredicted RBP6.63□□□□□ -1.35
ATG4D-210ENST00000588972 NANOGQ9H9S0 305 aa6.63□□□□□ -1.35
ATG4D-210ENST00000588972 HIF1ANQ9NWT6 349 aa6.63□□□□□ -1.35
ATG4D-210ENST00000588972 THUMPD1Q9NXG2 353 aaKnown RBP6.63□□□□□ -1.35
ATG4D-210ENST00000588972 CALML5Q9NZT1 146 aa6.63□□□□□ -1.35
ATG4D-210ENST00000588972 ZNF443Q9Y2A4 671 aaPredicted RBP6.63□□□□□ -1.35
ATG4D-210ENST00000588972 ARL2BPQ9Y2Y0 163 aa6.63□□□□□ -1.35
ATG4D-210ENST00000588972 TMED3Q9Y3Q3 217 aa6.63□□□□□ -1.35
ATG4D-210ENST00000588972 GMEB1Q9Y692 573 aa6.63□□□□□ -1.35
ATG4D-210ENST00000588972 DOCK7Q96N67 2140 aa6.62□□□□□ -1.35
ATG4D-210ENST00000588972 A0A087WZY1 265 aa6.62□□□□□ -1.35
ATG4D-210ENST00000588972 TRAV24A0A0B4J272 114 aa6.62□□□□□ -1.35
ATG4D-210ENST00000588972 A0A0G2JPF8 293 aa6.62□□□□□ -1.35
ATG4D-210ENST00000588972 TUBAL3A6NHL2 446 aa6.62□□□□□ -1.35
ATG4D-210ENST00000588972 HNRNPCL2B2RXH8 293 aa6.62□□□□□ -1.35
ATG4D-210ENST00000588972 HNRNPCL3B7ZW38 293 aa6.62□□□□□ -1.35
ATG4D-210ENST00000588972 AIM2O14862 343 aa6.62□□□□□ -1.35
ATG4D-210ENST00000588972 SLC22A2O15244 555 aa6.62□□□□□ -1.35
ATG4D-210ENST00000588972 EFNA2O43921 213 aa6.62□□□□□ -1.35
ATG4D-210ENST00000588972 EIF4E2O60573 245 aaKnown RBP6.62□□□□□ -1.35
ATG4D-210ENST00000588972 CCDC22O60826 627 aa6.62□□□□□ -1.35
ATG4D-210ENST00000588972 DCTN3O75935 186 aa6.62□□□□□ -1.35
ATG4D-210ENST00000588972 TFAP2AP05549 437 aa6.62□□□□□ -1.35
ATG4D-210ENST00000588972 DBIP07108 87 aaKnown RBP6.62□□□□□ -1.35
ATG4D-210ENST00000588972 GKN3PP0CG01 181 aa6.62□□□□□ -1.35
ATG4D-210ENST00000588972 HNRNPCL4P0DMR1 293 aa6.62□□□□□ -1.35
ATG4D-210ENST00000588972 PRG2P13727 222 aa6.62□□□□□ -1.35
ATG4D-210ENST00000588972 ZNF17P17021 662 aa6.62□□□□□ -1.35
ATG4D-210ENST00000588972 SHC1P29353 583 aa6.62□□□□□ -1.35
ATG4D-210ENST00000588972 SFTPDP35247 375 aa6.62□□□□□ -1.35
ATG4D-210ENST00000588972 NPBWR1P48145 328 aa6.62□□□□□ -1.35
ATG4D-210ENST00000588972 GZMMP51124 257 aa6.62□□□□□ -1.35
ATG4D-210ENST00000588972 ZNF81P51508 661 aa6.62□□□□□ -1.35
ATG4D-210ENST00000588972 LUMP51884 338 aaPredicted RBP6.62□□□□□ -1.35
ATG4D-210ENST00000588972 EEF1A1P68104 462 aaKnown RBP6.62□□□□□ -1.35
ATG4D-210ENST00000588972 CX3CL1P78423 397 aa6.62□□□□□ -1.35
ATG4D-210ENST00000588972 HOXC5Q00444 222 aa6.62□□□□□ -1.35
ATG4D-210ENST00000588972 GLIPR1L2Q4G1C9 344 aa6.62□□□□□ -1.35
ATG4D-210ENST00000588972 LIN52Q52LA3 116 aa6.62□□□□□ -1.35
ATG4D-210ENST00000588972 COQ5Q5HYK3 327 aa6.62□□□□□ -1.35
ATG4D-210ENST00000588972 ENPP6Q6UWR7 440 aa6.62□□□□□ -1.35
ATG4D-210ENST00000588972 COMTD1Q86VU5 262 aa6.62□□□□□ -1.35
ATG4D-210ENST00000588972 CLIP4Q8N3C7 705 aa6.62□□□□□ -1.35
ATG4D-210ENST00000588972 GTPBP8Q8N3Z3 284 aaPredicted RBP6.62□□□□□ -1.35
ATG4D-210ENST00000588972 ATP6V1C2Q8NEY4 427 aa6.62□□□□□ -1.35
ATG4D-210ENST00000588972 OR10A6Q8NH74 314 aa6.62□□□□□ -1.35
ATG4D-210ENST00000588972 DTNBP1Q96EV8 351 aa6.62□□□□□ -1.35
ATG4D-210ENST00000588972 DNAJA3Q96EY1 480 aa6.62□□□□□ -1.35
ATG4D-210ENST00000588972 NEURL2Q9BR09 285 aa6.62□□□□□ -1.35
ATG4D-210ENST00000588972 ATG101Q9BSB4 218 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms