RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 SOCS2O14508 198 aa16.83■□□□□ 0.28
CLPTM1-204ENST00000585961 KHDRBS3O75525 346 aaKnown RBP16.83■□□□□ 0.28
CLPTM1-204ENST00000585961 RPS2P15880 293 aaKnown RBP16.83■□□□□ 0.28
CLPTM1-204ENST00000585961 SELEP16581 610 aa16.83■□□□□ 0.28
CLPTM1-204ENST00000585961 PMELP40967 661 aa16.83■□□□□ 0.28
CLPTM1-204ENST00000585961 MTNR1AP48039 350 aa16.83■□□□□ 0.28
CLPTM1-204ENST00000585961 IL13RA1P78552 427 aa16.83■□□□□ 0.28
CLPTM1-204ENST00000585961 PAX2Q02962 417 aa16.83■□□□□ 0.28
CLPTM1-204ENST00000585961 SRSF4Q08170 494 aaKnown RBP16.83■□□□□ 0.28
CLPTM1-204ENST00000585961 MEP1BQ16820 701 aa16.83■□□□□ 0.28
CLPTM1-204ENST00000585961 ANKDD1AQ495B1 522 aa16.83■□□□□ 0.28
CLPTM1-204ENST00000585961 COQ5Q5HYK3 327 aa16.83■□□□□ 0.28
CLPTM1-204ENST00000585961 BTNL3Q6UXE8 466 aa16.83■□□□□ 0.28
CLPTM1-204ENST00000585961 TMPRSS11FQ6ZWK6 438 aa16.83■□□□□ 0.28
CLPTM1-204ENST00000585961 FAM122BQ7Z309 247 aa16.83■□□□□ 0.28
CLPTM1-204ENST00000585961 KLBQ86Z14 1044 aa16.83■□□□□ 0.28
CLPTM1-204ENST00000585961 GLB1L2Q8IW92 636 aa16.83■□□□□ 0.28
CLPTM1-204ENST00000585961 POU5F2Q8N7G0 328 aa16.83■□□□□ 0.28
CLPTM1-204ENST00000585961 C19orf18Q8NEA5 215 aa16.83■□□□□ 0.28
CLPTM1-204ENST00000585961 OR8G5Q8NG78 346 aa16.83■□□□□ 0.28
CLPTM1-204ENST00000585961 OR13G1Q8NGZ3 307 aa16.83■□□□□ 0.28
CLPTM1-204ENST00000585961 RAB40AQ8WXH6 277 aa16.83■□□□□ 0.28
CLPTM1-204ENST00000585961 FAM46AQ96IP4 442 aaKnown RBP16.83■□□□□ 0.28
CLPTM1-204ENST00000585961 ZNF582Q96NG8 517 aaPredicted RBP16.83■□□□□ 0.28
CLPTM1-204ENST00000585961 TMEM246Q9BRR3 403 aa16.83■□□□□ 0.28
CLPTM1-204ENST00000585961 SYT4Q9H2B2 425 aa16.83■□□□□ 0.28
CLPTM1-204ENST00000585961 IER3IP1Q9Y5U9 82 aa16.83■□□□□ 0.28
CLPTM1-204ENST00000585961 OR6C6A6NF89 314 aa16.82■□□□□ 0.28
CLPTM1-204ENST00000585961 GSTA4O15217 222 aa16.82■□□□□ 0.28
CLPTM1-204ENST00000585961 PTP4A3O75365 173 aa16.82■□□□□ 0.28
CLPTM1-204ENST00000585961 HLA-DPB1P04440 258 aa16.82■□□□□ 0.28
CLPTM1-204ENST00000585961 AQP6Q13520 282 aa16.82■□□□□ 0.28
CLPTM1-204ENST00000585961 MAPRE2Q15555 327 aa16.82■□□□□ 0.28
CLPTM1-204ENST00000585961 C16orf87Q6PH81 154 aa16.82■□□□□ 0.28
CLPTM1-204ENST00000585961 CORO6Q6QEF8 472 aa16.82■□□□□ 0.28
CLPTM1-204ENST00000585961 LYPD2Q6UXB3 125 aa16.82■□□□□ 0.28
CLPTM1-204ENST00000585961 LRRN1Q6UXK5 716 aa16.82■□□□□ 0.28
CLPTM1-204ENST00000585961 BRD3OSQ6XYD6 125 aa16.82■□□□□ 0.28
CLPTM1-204ENST00000585961 HDXQ7Z353 690 aa16.82■□□□□ 0.28
CLPTM1-204ENST00000585961 MUC20Q8N307 709 aaPredicted RBP16.82■□□□□ 0.28
CLPTM1-204ENST00000585961 OR5L1Q8NGL2 311 aa16.82■□□□□ 0.28
CLPTM1-204ENST00000585961 TMIGD2Q96BF3 282 aa16.82■□□□□ 0.28
CLPTM1-204ENST00000585961 RCN3Q96D15 328 aa16.82■□□□□ 0.28
CLPTM1-204ENST00000585961 COG8Q96MW5 612 aa16.82■□□□□ 0.28
CLPTM1-204ENST00000585961 TSSK2Q96PF2 358 aa16.82■□□□□ 0.28
CLPTM1-204ENST00000585961 NUAK2Q9H093 628 aa16.82■□□□□ 0.28
CLPTM1-204ENST00000585961 NMNAT1Q9HAN9 279 aaPredicted RBP16.82■□□□□ 0.28
CLPTM1-204ENST00000585961 LRCH1Q9Y2L9 728 aa16.82■□□□□ 0.28
CLPTM1-204ENST00000585961 TANC2Q9HCD6 1990 aa16.82■□□□□ 0.28
CLPTM1-204ENST00000585961 IGHV2-70DA0A0C4DH43 119 aa16.81■□□□□ 0.28
CLPTM1-204ENST00000585961 POM121CA8CG34 1229 aa16.81■□□□□ 0.28
CLPTM1-204ENST00000585961 CXCR6O00574 342 aa16.81■□□□□ 0.28
CLPTM1-204ENST00000585961 AHCYL1O43865 530 aa16.81■□□□□ 0.28
CLPTM1-204ENST00000585961 TROVE2P10155 538 aaKnown RBP eCLIP16.81■□□□□ 0.28
CLPTM1-204ENST00000585961 CDKN2AP42771 156 aaKnown RBP16.81■□□□□ 0.28
CLPTM1-204ENST00000585961 SRP9P49458 86 aaKnown RBP16.81■□□□□ 0.28
CLPTM1-204ENST00000585961 LSM6P62312 80 aaKnown RBP16.81■□□□□ 0.28
CLPTM1-204ENST00000585961 LIPEQ05469 1076 aa16.81■□□□□ 0.28
CLPTM1-204ENST00000585961 KRR1Q13601 381 aaKnown RBP16.81■□□□□ 0.28
CLPTM1-204ENST00000585961 DEFB112Q30KQ8 113 aa16.81■□□□□ 0.28
CLPTM1-204ENST00000585961 IFI44LQ53G44 452 aa16.81■□□□□ 0.28
CLPTM1-204ENST00000585961 PTCHD4Q6ZW05 846 aa16.81■□□□□ 0.28
CLPTM1-204ENST00000585961 SPATC1Q76KD6 591 aa16.81■□□□□ 0.28
CLPTM1-204ENST00000585961 SLC15A3Q8IY34 581 aa16.81■□□□□ 0.28
CLPTM1-204ENST00000585961 OR10S1Q8NGN2 331 aa16.81■□□□□ 0.28
CLPTM1-204ENST00000585961 ZDHHC16Q969W1 377 aa16.81■□□□□ 0.28
CLPTM1-204ENST00000585961 ZMAT3Q9HA38 289 aaKnown RBP16.81■□□□□ 0.28
CLPTM1-204ENST00000585961 SRA1Q9HD15 236 aaKnown RBP16.81■□□□□ 0.28
CLPTM1-204ENST00000585961 TMEM100Q9NV29 134 aa16.81■□□□□ 0.28
CLPTM1-204ENST00000585961 ARMCX1Q9P291 453 aa16.81■□□□□ 0.28
CLPTM1-204ENST00000585961 MIOXQ9UGB7 285 aa16.81■□□□□ 0.28
CLPTM1-204ENST00000585961 POLR1DQ9Y2S0 133 aa16.81■□□□□ 0.28
CLPTM1-204ENST00000585961 TRAV40A0A0B4J280 105 aa16.8■□□□□ 0.28
CLPTM1-204ENST00000585961 MLNRO43193 412 aa16.8■□□□□ 0.28
CLPTM1-204ENST00000585961 HOXA3O43365 443 aaPredicted RBP16.8■□□□□ 0.28
CLPTM1-204ENST00000585961 SERPINA1P01009 418 aa16.8■□□□□ 0.28
CLPTM1-204ENST00000585961 HOXA4Q00056 320 aaPredicted RBP16.8■□□□□ 0.28
CLPTM1-204ENST00000585961 RSPO1Q2MKA7 263 aaPredicted RBP16.8■□□□□ 0.28
CLPTM1-204ENST00000585961 FBXW12Q6X9E4 464 aa16.8■□□□□ 0.28
CLPTM1-204ENST00000585961 TSEN54Q7Z6J9 526 aaKnown RBP16.8■□□□□ 0.28
CLPTM1-204ENST00000585961 NAA40Q86UY6 237 aa16.8■□□□□ 0.28
CLPTM1-204ENST00000585961 KIR3DL3Q8N743 410 aa16.8■□□□□ 0.28
CLPTM1-204ENST00000585961 UPRTQ96BW1 309 aa16.8■□□□□ 0.28
CLPTM1-204ENST00000585961 NEIL1Q96FI4 390 aaPredicted RBP16.8■□□□□ 0.28
CLPTM1-204ENST00000585961 PLEKHA8Q96JA3 519 aa16.8■□□□□ 0.28
CLPTM1-204ENST00000585961 HSH2DQ96JZ2 352 aa16.8■□□□□ 0.28
CLPTM1-204ENST00000585961 NUDT16L1Q9BRJ7 211 aaKnown RBP16.8■□□□□ 0.28
CLPTM1-204ENST00000585961 FGFR1OP2Q9NVK5 253 aa16.8■□□□□ 0.28
CLPTM1-204ENST00000585961 RPS6KA6Q9UK32 745 aa16.8■□□□□ 0.28
CLPTM1-204ENST00000585961 KIR2DS1A0A191URI9 304 aa16.79■□□□□ 0.28
CLPTM1-204ENST00000585961 IFNL4K9M1U5 179 aa16.79■□□□□ 0.28
CLPTM1-204ENST00000585961 NDUFB2O95178 105 aa16.79■□□□□ 0.28
CLPTM1-204ENST00000585961 NCK1P16333 377 aa16.79■□□□□ 0.28
CLPTM1-204ENST00000585961 SDHAP31040 664 aa16.79■□□□□ 0.28
CLPTM1-204ENST00000585961 PDLIM3Q53GG5 364 aaPredicted RBP16.79■□□□□ 0.28
CLPTM1-204ENST00000585961 CGB2Q6NT52 195 aa16.79■□□□□ 0.28
CLPTM1-204ENST00000585961 CBLL1Q75N03 491 aa16.79■□□□□ 0.28
CLPTM1-204ENST00000585961 SLC7A13Q8TCU3 470 aa16.79■□□□□ 0.28
CLPTM1-204ENST00000585961 SLC30A2Q9BRI3 323 aa16.79■□□□□ 0.28
CLPTM1-204ENST00000585961 VSX1Q9NZR4 365 aaPredicted RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms