RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 ZNF878C9JN71 531 aa11.85□□□□□ -0.51
PRKCSH-202ENST00000585540 RER1O15258 196 aa11.85□□□□□ -0.51
PRKCSH-202ENST00000585540 MPZL1O95297 269 aa11.85□□□□□ -0.51
PRKCSH-202ENST00000585540 ALPLP05186 524 aa11.85□□□□□ -0.51
PRKCSH-202ENST00000585540 ADH4P08319 380 aa11.85□□□□□ -0.51
PRKCSH-202ENST00000585540 PYCR1P32322 319 aa11.85□□□□□ -0.51
PRKCSH-202ENST00000585540 SLC15A1P46059 708 aa11.85□□□□□ -0.51
PRKCSH-202ENST00000585540 RAD23AP54725 363 aa11.85□□□□□ -0.51
PRKCSH-202ENST00000585540 TPTEP56180 551 aa11.85□□□□□ -0.51
PRKCSH-202ENST00000585540 GRB2P62993 217 aaKnown RBP11.85□□□□□ -0.51
PRKCSH-202ENST00000585540 PTGES3Q15185 160 aaKnown RBP11.85□□□□□ -0.51
PRKCSH-202ENST00000585540 SNAPC1Q16533 368 aa11.85□□□□□ -0.51
PRKCSH-202ENST00000585540 NKPD1Q17RQ9 610 aa11.85□□□□□ -0.51
PRKCSH-202ENST00000585540 KRTAP27-1Q3LI81 207 aa11.85□□□□□ -0.51
PRKCSH-202ENST00000585540 LINC01590Q5TEZ4 76 aa11.85□□□□□ -0.51
PRKCSH-202ENST00000585540 ZNF101Q8IZC7 436 aa11.85□□□□□ -0.51
PRKCSH-202ENST00000585540 ZNF454Q8N9F8 522 aa11.85□□□□□ -0.51
PRKCSH-202ENST00000585540 OR9Q1Q8NGQ5 310 aa11.85□□□□□ -0.51
PRKCSH-202ENST00000585540 OR6K6Q8NGW6 343 aa11.85□□□□□ -0.51
PRKCSH-202ENST00000585540 SLC25A40Q8TBP6 338 aa11.85□□□□□ -0.51
PRKCSH-202ENST00000585540 ZNRF4Q8WWF5 429 aa11.85□□□□□ -0.51
PRKCSH-202ENST00000585540 FAM168AQ92567 244 aa11.85□□□□□ -0.51
PRKCSH-202ENST00000585540 ITFG2Q969R8 447 aa11.85□□□□□ -0.51
PRKCSH-202ENST00000585540 MARS2Q96GW9 593 aaKnown RBP11.85□□□□□ -0.51
PRKCSH-202ENST00000585540 INTS14Q96SY0 518 aa11.85□□□□□ -0.51
PRKCSH-202ENST00000585540 PITX2Q99697 317 aa11.85□□□□□ -0.51
PRKCSH-202ENST00000585540 SLC29A1Q99808 456 aa11.85□□□□□ -0.51
PRKCSH-202ENST00000585540 VRK1Q99986 396 aaPredicted RBP11.85□□□□□ -0.51
PRKCSH-202ENST00000585540 GABARAPL3Q9BY60 117 aa11.85□□□□□ -0.51
PRKCSH-202ENST00000585540 RIBC2Q9H4K1 309 aa11.85□□□□□ -0.51
PRKCSH-202ENST00000585540 DUSP13Q9UII6 198 aa11.85□□□□□ -0.51
PRKCSH-202ENST00000585540 FAM183AA6NL82 134 aa11.84□□□□□ -0.51
PRKCSH-202ENST00000585540 ZAR1LA6NP61 321 aa11.84□□□□□ -0.51
PRKCSH-202ENST00000585540 C17orf100A8MU93 164 aa11.84□□□□□ -0.51
PRKCSH-202ENST00000585540 M0R129 80 aa11.84□□□□□ -0.51
PRKCSH-202ENST00000585540 SSX4O60224 188 aa11.84□□□□□ -0.51
PRKCSH-202ENST00000585540 INHBBP09529 407 aa11.84□□□□□ -0.51
PRKCSH-202ENST00000585540 CLUP10909 449 aa11.84□□□□□ -0.51
PRKCSH-202ENST00000585540 RAC2P15153 192 aa11.84□□□□□ -0.51
PRKCSH-202ENST00000585540 SELEP16581 610 aa11.84□□□□□ -0.51
PRKCSH-202ENST00000585540 KITLGP21583 273 aa11.84□□□□□ -0.51
PRKCSH-202ENST00000585540 GSTT1P30711 240 aa11.84□□□□□ -0.51
PRKCSH-202ENST00000585540 POLR2IP36954 125 aaKnown RBP11.84□□□□□ -0.51
PRKCSH-202ENST00000585540 ALDH3A2P51648 485 aa11.84□□□□□ -0.51
PRKCSH-202ENST00000585540 MEP1BQ16820 701 aa11.84□□□□□ -0.51
PRKCSH-202ENST00000585540 SLX4IPQ5VYV7 408 aa11.84□□□□□ -0.51
PRKCSH-202ENST00000585540 TMEM154Q6P9G4 183 aa11.84□□□□□ -0.51
PRKCSH-202ENST00000585540 DRAM2Q6UX65 266 aa11.84□□□□□ -0.51
PRKCSH-202ENST00000585540 COLCA1Q6ZS62 124 aa11.84□□□□□ -0.51
PRKCSH-202ENST00000585540 RFPL4BQ6ZWI9 263 aa11.84□□□□□ -0.51
PRKCSH-202ENST00000585540 KLF14Q8TD94 323 aaPredicted RBP11.84□□□□□ -0.51
PRKCSH-202ENST00000585540 PTP4A1Q93096 173 aa11.84□□□□□ -0.51
PRKCSH-202ENST00000585540 MNTQ99583 582 aa11.84□□□□□ -0.51
PRKCSH-202ENST00000585540 SYT3Q9BQG1 590 aa11.84□□□□□ -0.51
PRKCSH-202ENST00000585540 PIMREGQ9BSJ6 248 aa11.84□□□□□ -0.51
PRKCSH-202ENST00000585540 C9orf16Q9BUW7 83 aa11.84□□□□□ -0.51
PRKCSH-202ENST00000585540 HCAR1Q9BXC0 346 aa11.84□□□□□ -0.51
PRKCSH-202ENST00000585540 MED20Q9H944 212 aa11.84□□□□□ -0.51
PRKCSH-202ENST00000585540 C8orf4Q9NR00 106 aa11.84□□□□□ -0.51
PRKCSH-202ENST00000585540 TAAR3PQ9P1P4 343 aa11.84□□□□□ -0.51
PRKCSH-202ENST00000585540 ZDHHC8Q9ULC8 765 aa11.84□□□□□ -0.51
PRKCSH-202ENST00000585540 NOP16Q9Y3C1 178 aaKnown RBP11.84□□□□□ -0.51
PRKCSH-202ENST00000585540 GRIP1Q9Y3R0 1128 aa11.84□□□□□ -0.51
PRKCSH-202ENST00000585540 MED13LQ71F56 2210 aa11.84□□□□□ -0.51
PRKCSH-202ENST00000585540 SLC22A31A6NKX4 558 aa11.83□□□□□ -0.52
PRKCSH-202ENST00000585540 M0R135 149 aa11.83□□□□□ -0.52
PRKCSH-202ENST00000585540 GYPBP06028 91 aa11.83□□□□□ -0.52
PRKCSH-202ENST00000585540 ADRA2AP08913 450 aa11.83□□□□□ -0.52
PRKCSH-202ENST00000585540 SPARCP09486 303 aa11.83□□□□□ -0.52
PRKCSH-202ENST00000585540 PEX2P28328 305 aa11.83□□□□□ -0.52
PRKCSH-202ENST00000585540 OTX1P32242 354 aaPredicted RBP11.83□□□□□ -0.52
PRKCSH-202ENST00000585540 TRIP10Q15642 601 aa11.83□□□□□ -0.52
PRKCSH-202ENST00000585540 MSMPQ1L6U9 139 aa11.83□□□□□ -0.52
PRKCSH-202ENST00000585540 NXNL2Q5VZ03 156 aa11.83□□□□□ -0.52
PRKCSH-202ENST00000585540 LPCAT4Q643R3 524 aa11.83□□□□□ -0.52
PRKCSH-202ENST00000585540 C12orf73Q69YU5 71 aa11.83□□□□□ -0.52
PRKCSH-202ENST00000585540 LYPD4Q6UWN0 246 aa11.83□□□□□ -0.52
PRKCSH-202ENST00000585540 FBXW12Q6X9E4 464 aa11.83□□□□□ -0.52
PRKCSH-202ENST00000585540 CFAP77Q6ZQR2 320 aa11.83□□□□□ -0.52
PRKCSH-202ENST00000585540 CXXC5Q7LFL8 322 aaKnown RBP11.83□□□□□ -0.52
PRKCSH-202ENST00000585540 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.83□□□□□ -0.52
PRKCSH-202ENST00000585540 GID4Q8IVV7 300 aa11.83□□□□□ -0.52
PRKCSH-202ENST00000585540 ZNF786Q8N393 782 aa11.83□□□□□ -0.52
PRKCSH-202ENST00000585540 OR51L1Q8NGJ5 315 aa11.83□□□□□ -0.52
PRKCSH-202ENST00000585540 OR6N2Q8NGY6 317 aa11.83□□□□□ -0.52
PRKCSH-202ENST00000585540 EME1Q96AY2 570 aa11.83□□□□□ -0.52
PRKCSH-202ENST00000585540 ZNF799Q96GE5 643 aa11.83□□□□□ -0.52
PRKCSH-202ENST00000585540 KCNJ15Q99712 375 aa11.83□□□□□ -0.52
PRKCSH-202ENST00000585540 C1QTNF5Q9BXJ0 243 aa11.83□□□□□ -0.52
PRKCSH-202ENST00000585540 OR2J1Q9GZK6 312 aa11.83□□□□□ -0.52
PRKCSH-202ENST00000585540 NIPAL2Q9H841 368 aa11.83□□□□□ -0.52
PRKCSH-202ENST00000585540 PNRC2Q9NPJ4 139 aaKnown RBP11.83□□□□□ -0.52
PRKCSH-202ENST00000585540 HINT3Q9NQE9 182 aaKnown RBP11.83□□□□□ -0.52
PRKCSH-202ENST00000585540 TVP23BQ9NYZ1 205 aa11.83□□□□□ -0.52
PRKCSH-202ENST00000585540 TMEM14AQ9Y6G1 99 aa11.83□□□□□ -0.52
PRKCSH-202ENST00000585540 H7C1Q1 480 aa11.82□□□□□ -0.52
PRKCSH-202ENST00000585540 ZNF593O00488 134 aaPredicted RBP11.82□□□□□ -0.52
PRKCSH-202ENST00000585540 PHYHO14832 338 aa11.82□□□□□ -0.52
PRKCSH-202ENST00000585540 NDUFS7O75251 213 aa11.82□□□□□ -0.52
PRKCSH-202ENST00000585540 ACSM4P0C7M7 580 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms