RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 A6NIZ1 184 aa12.69□□□□□ -0.38
CDK5RAP3-237ENST00000585163 MS4A18H0YCH9 400 aa12.69□□□□□ -0.38
CDK5RAP3-237ENST00000585163 LMX1BO60663 402 aa12.69□□□□□ -0.38
CDK5RAP3-237ENST00000585163 HLA-AP01891 365 aaKnown RBP12.69□□□□□ -0.38
CDK5RAP3-237ENST00000585163 IL11P20809 199 aa12.69□□□□□ -0.38
CDK5RAP3-237ENST00000585163 CD34P28906 385 aa12.69□□□□□ -0.38
CDK5RAP3-237ENST00000585163 LTBRP36941 435 aa12.69□□□□□ -0.38
CDK5RAP3-237ENST00000585163 RAP1BP61224 184 aa12.69□□□□□ -0.38
CDK5RAP3-237ENST00000585163 RAP1AP62834 184 aa12.69□□□□□ -0.38
CDK5RAP3-237ENST00000585163 HSD11B2P80365 405 aa12.69□□□□□ -0.38
CDK5RAP3-237ENST00000585163 FMODQ06828 376 aa12.69□□□□□ -0.38
CDK5RAP3-237ENST00000585163 SQSTM1Q13501 440 aa12.69□□□□□ -0.38
CDK5RAP3-237ENST00000585163 MS4A18Q3C1V0 323 aa12.69□□□□□ -0.38
CDK5RAP3-237ENST00000585163 PHF19Q5T6S3 580 aa12.69□□□□□ -0.38
CDK5RAP3-237ENST00000585163 RAB12Q6IQ22 244 aa12.69□□□□□ -0.38
CDK5RAP3-237ENST00000585163 ARSKQ6UWY0 536 aa12.69□□□□□ -0.38
CDK5RAP3-237ENST00000585163 C17orf107Q6ZR85 190 aa12.69□□□□□ -0.38
CDK5RAP3-237ENST00000585163 KCNRGQ8N5I3 272 aa12.69□□□□□ -0.38
CDK5RAP3-237ENST00000585163 OR4S1Q8NGB4 309 aa12.69□□□□□ -0.38
CDK5RAP3-237ENST00000585163 ASB10Q8WXI3 467 aa12.69□□□□□ -0.38
CDK5RAP3-237ENST00000585163 PRRT1Q99946 306 aa12.69□□□□□ -0.38
CDK5RAP3-237ENST00000585163 METTL21EPA6NDL7 271 aa12.68□□□□□ -0.38
CDK5RAP3-237ENST00000585163 WIPF3A6NGB9 483 aa12.68□□□□□ -0.38
CDK5RAP3-237ENST00000585163 TMEM200CA6NKL6 621 aa12.68□□□□□ -0.38
CDK5RAP3-237ENST00000585163 OR6C76A6NM76 312 aa12.68□□□□□ -0.38
CDK5RAP3-237ENST00000585163 DISC1C4P0D8 188 aa12.68□□□□□ -0.38
CDK5RAP3-237ENST00000585163 RAB27BO00194 218 aa12.68□□□□□ -0.38
CDK5RAP3-237ENST00000585163 FBLP22087 321 aaKnown RBP12.68□□□□□ -0.38
CDK5RAP3-237ENST00000585163 CD38P28907 300 aa12.68□□□□□ -0.38
CDK5RAP3-237ENST00000585163 CBX5P45973 191 aa12.68□□□□□ -0.38
CDK5RAP3-237ENST00000585163 DEFB133Q30KQ1 61 aa12.68□□□□□ -0.38
CDK5RAP3-237ENST00000585163 ZNF260Q3ZCT1 412 aa12.68□□□□□ -0.38
CDK5RAP3-237ENST00000585163 LIN54Q6MZP7 749 aa12.68□□□□□ -0.38
CDK5RAP3-237ENST00000585163 JMJD6Q6NYC1 403 aaPredicted RBP12.68□□□□□ -0.38
CDK5RAP3-237ENST00000585163 DNM1P34Q6PK57 102 aa12.68□□□□□ -0.38
CDK5RAP3-237ENST00000585163 LINC00346Q8IVM7 164 aa12.68□□□□□ -0.38
CDK5RAP3-237ENST00000585163 PRSS58Q8IYP2 241 aa12.68□□□□□ -0.38
CDK5RAP3-237ENST00000585163 ACBD4Q8NC06 268 aa12.68□□□□□ -0.38
CDK5RAP3-237ENST00000585163 RELL2Q8NC24 303 aaPredicted RBP12.68□□□□□ -0.38
CDK5RAP3-237ENST00000585163 PXT1Q8NFP0 134 aa12.68□□□□□ -0.38
CDK5RAP3-237ENST00000585163 OR1L3Q8NH93 324 aa12.68□□□□□ -0.38
CDK5RAP3-237ENST00000585163 SLC2A4RGQ9NR83 387 aa12.68□□□□□ -0.38
CDK5RAP3-237ENST00000585163 RASL12Q9NYN1 266 aa12.68□□□□□ -0.38
CDK5RAP3-237ENST00000585163 RAB22AQ9UL26 194 aa12.68□□□□□ -0.38
CDK5RAP3-237ENST00000585163 TNFSF18Q9UNG2 199 aa12.68□□□□□ -0.38
CDK5RAP3-237ENST00000585163 VSIG4Q9Y279 399 aa12.68□□□□□ -0.38
CDK5RAP3-237ENST00000585163 A0A1W2PR77 199 aa12.68□□□□□ -0.38
CDK5RAP3-237ENST00000585163 SLC25A4P12235 298 aa12.68□□□□□ -0.38
CDK5RAP3-237ENST00000585163 MPZP25189 248 aa12.68□□□□□ -0.38
CDK5RAP3-237ENST00000585163 MMP16P51512 607 aa12.68□□□□□ -0.38
CDK5RAP3-237ENST00000585163 ZP4Q12836 540 aa12.68□□□□□ -0.38
CDK5RAP3-237ENST00000585163 C11orf87Q6NUJ2 197 aa12.68□□□□□ -0.38
CDK5RAP3-237ENST00000585163 ZNF813Q6ZN06 617 aa12.68□□□□□ -0.38
CDK5RAP3-237ENST00000585163 OR6S1Q8NH40 331 aa12.68□□□□□ -0.38
CDK5RAP3-237ENST00000585163 ZBTB8AQ96BR9 441 aa12.68□□□□□ -0.38
CDK5RAP3-237ENST00000585163 MRPS24Q96EL2 167 aaKnown RBP12.68□□□□□ -0.38
CDK5RAP3-237ENST00000585163 KCNK17Q96T54 332 aa12.68□□□□□ -0.38
CDK5RAP3-237ENST00000585163 VN1R1Q9GZP7 353 aa12.68□□□□□ -0.38
CDK5RAP3-237ENST00000585163 DNTTIP1Q9H147 329 aa12.68□□□□□ -0.38
CDK5RAP3-237ENST00000585163 WDR13Q9H1Z4 485 aa12.68□□□□□ -0.38
CDK5RAP3-237ENST00000585163 NOP16Q9Y3C1 178 aaKnown RBP12.68□□□□□ -0.38
CDK5RAP3-237ENST00000585163 LOC101059948A0A1B0GTJ6 334 aa12.67□□□□□ -0.38
CDK5RAP3-237ENST00000585163 CPED1A4D0V7 1026 aa12.67□□□□□ -0.38
CDK5RAP3-237ENST00000585163 P2RY10O00398 339 aa12.67□□□□□ -0.38
CDK5RAP3-237ENST00000585163 OR2F2O95006 317 aa12.67□□□□□ -0.38
CDK5RAP3-237ENST00000585163 HLA-GP17693 338 aa12.67□□□□□ -0.38
CDK5RAP3-237ENST00000585163 ZBTB25P24278 435 aa12.67□□□□□ -0.38
CDK5RAP3-237ENST00000585163 CXADRP78310 365 aa12.67□□□□□ -0.38
CDK5RAP3-237ENST00000585163 OR2F1Q13607 317 aa12.67□□□□□ -0.38
CDK5RAP3-237ENST00000585163 ZNF273Q14593 569 aa12.67□□□□□ -0.38
CDK5RAP3-237ENST00000585163 NKPD1Q17RQ9 610 aa12.67□□□□□ -0.38
CDK5RAP3-237ENST00000585163 RNASE10Q5GAN6 216 aaKnown RBP12.67□□□□□ -0.38
CDK5RAP3-237ENST00000585163 CD163Q86VB7 1156 aa12.67□□□□□ -0.38
CDK5RAP3-237ENST00000585163 SLC25A42Q86VD7 318 aa12.67□□□□□ -0.38
CDK5RAP3-237ENST00000585163 WDFY1Q8IWB7 410 aa12.67□□□□□ -0.38
CDK5RAP3-237ENST00000585163 DEFB119Q8N690 84 aa12.67□□□□□ -0.38
CDK5RAP3-237ENST00000585163 TMEM234Q8WY98 164 aa12.67□□□□□ -0.38
CDK5RAP3-237ENST00000585163 CNTD2Q9H8S5 307 aa12.67□□□□□ -0.38
CDK5RAP3-237ENST00000585163 IGKV1D-43A0A0B4J1Z2 117 aa12.67□□□□□ -0.38
CDK5RAP3-237ENST00000585163 IGHV1OR15-9A0A0B4J2B8 117 aa12.67□□□□□ -0.38
CDK5RAP3-237ENST00000585163 A0A1B0GW55 424 aa12.67□□□□□ -0.38
CDK5RAP3-237ENST00000585163 RHPN2P1A8MT19 583 aa12.67□□□□□ -0.38
CDK5RAP3-237ENST00000585163 NPIPA5E9PKD4 350 aa12.67□□□□□ -0.38
CDK5RAP3-237ENST00000585163 CSN2P05814 226 aa12.67□□□□□ -0.38
CDK5RAP3-237ENST00000585163 DUX4L2P0CJ85 424 aa12.67□□□□□ -0.38
CDK5RAP3-237ENST00000585163 DUX4L3P0CJ86 424 aa12.67□□□□□ -0.38
CDK5RAP3-237ENST00000585163 DUX4L4P0CJ87 422 aa12.67□□□□□ -0.38
CDK5RAP3-237ENST00000585163 DUX4L5P0CJ88 424 aa12.67□□□□□ -0.38
CDK5RAP3-237ENST00000585163 DUX4L6P0CJ89 424 aa12.67□□□□□ -0.38
CDK5RAP3-237ENST00000585163 DUX4L7P0CJ90 424 aa12.67□□□□□ -0.38
CDK5RAP3-237ENST00000585163 DAP3P51398 398 aaKnown RBP12.67□□□□□ -0.38
CDK5RAP3-237ENST00000585163 ZMYND11Q15326 602 aa12.67□□□□□ -0.38
CDK5RAP3-237ENST00000585163 CDNFQ49AH0 187 aa12.67□□□□□ -0.38
CDK5RAP3-237ENST00000585163 C14orf28Q4W4Y0 310 aa12.67□□□□□ -0.38
CDK5RAP3-237ENST00000585163 C3orf33Q6P1S2 294 aa12.67□□□□□ -0.38
CDK5RAP3-237ENST00000585163 OGFOD3Q6PK18 319 aa12.67□□□□□ -0.38
CDK5RAP3-237ENST00000585163 LYG2Q86SG7 212 aa12.67□□□□□ -0.38
CDK5RAP3-237ENST00000585163 FJX1Q86VR8 437 aa12.67□□□□□ -0.38
CDK5RAP3-237ENST00000585163 PAQR4Q8N4S7 273 aaPredicted RBP12.67□□□□□ -0.38
CDK5RAP3-237ENST00000585163 OR10K1Q8NGX5 313 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms